RNA–Protein interactions for RNA: ENST00000512317.5

SPARCL1-207, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-207ENST00000512317 SPATA31C2B4DYI2 1134 aa6.94□□□□□ -1.3
SPARCL1-207ENST00000512317 EIF4G2P78344 907 aaKnown RBP eCLIP6.94□□□□□ -1.3
SPARCL1-207ENST00000512317 TPRNQ4KMQ1 711 aa6.94□□□□□ -1.3
SPARCL1-207ENST00000512317 TAS1R3Q7RTX0 852 aa6.94□□□□□ -1.3
SPARCL1-207ENST00000512317 NGDNQ8NEJ9 315 aaKnown RBP6.94□□□□□ -1.3
SPARCL1-207ENST00000512317 CEP126Q9P2H0 1117 aa6.94□□□□□ -1.3
SPARCL1-207ENST00000512317 ACEP12821 1306 aa6.94□□□□□ -1.3
SPARCL1-207ENST00000512317 THSD7AQ9UPZ6 1657 aa6.93□□□□□ -1.3
SPARCL1-207ENST00000512317 BLMP54132 1417 aaPredicted RBP6.93□□□□□ -1.3
SPARCL1-207ENST00000512317 GTF2E1P29083 439 aaPredicted RBP6.93□□□□□ -1.3
SPARCL1-207ENST00000512317 GSK3AP49840 483 aa6.93□□□□□ -1.3
SPARCL1-207ENST00000512317 DBN1Q16643 649 aa6.93□□□□□ -1.3
SPARCL1-207ENST00000512317 LARP1Q6PKG0 1096 aaKnown RBP6.93□□□□□ -1.3
SPARCL1-207ENST00000512317 KRT27Q7Z3Y8 459 aa6.93□□□□□ -1.3
SPARCL1-207ENST00000512317 SCARF2Q96GP6 870 aaPredicted RBP6.93□□□□□ -1.3
SPARCL1-207ENST00000512317 ESYT1Q9BSJ8 1104 aa6.93□□□□□ -1.3
SPARCL1-207ENST00000512317 TIMMDC1Q9NPL8 285 aa6.93□□□□□ -1.3
SPARCL1-207ENST00000512317 PRDM11Q9NQV5 511 aa6.93□□□□□ -1.3
SPARCL1-207ENST00000512317 CAMTA1Q9Y6Y1 1673 aa6.93□□□□□ -1.3
SPARCL1-207ENST00000512317 ARHGEF10O15013 1369 aa6.93□□□□□ -1.3
SPARCL1-207ENST00000512317 GPR25O00155 361 aa6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 NEUROD1Q13562 356 aa6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 R3HDM1Q15032 1099 aaKnown RBP6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 EZH2Q15910 746 aaKnown RBP6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 NBPF8Q3BBV2 869 aa6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 LYPD4Q6UWN0 246 aa6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 KCTD17Q8N5Z5 321 aa6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 CNKSR1Q969H4 720 aa6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 GTPBP3Q969Y2 492 aaKnown RBP6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 SIRT1Q96EB6 747 aa6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 RAB6BQ9NRW1 208 aa6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 NSFL1CQ9UNZ2 370 aaKnown RBP6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 TBC1D2BQ9UPU7 963 aa6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 SPATA31A5Q5VU36 1347 aa6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 SPATA31A7Q8IWB4 1347 aa6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 PPIP5K1Q6PFW1 1433 aa6.92□□□□□ -1.3
SPARCL1-207ENST00000512317 TNS1Q9HBL0 1735 aaKnown RBP6.91□□□□□ -1.3
SPARCL1-207ENST00000512317 COL14A1Q05707 1796 aaKnown RBP6.91□□□□□ -1.3
SPARCL1-207ENST00000512317 TRIM37O94972 964 aa6.91□□□□□ -1.3
SPARCL1-207ENST00000512317 F11P03951 625 aa6.91□□□□□ -1.3
SPARCL1-207ENST00000512317 CELA2BP08218 269 aaPredicted RBP6.91□□□□□ -1.3
SPARCL1-207ENST00000512317 KANK3Q6NY19 840 aa6.91□□□□□ -1.3
SPARCL1-207ENST00000512317 L3MBTL2Q969R5 705 aa6.91□□□□□ -1.3
SPARCL1-207ENST00000512317 CCDC85AQ96PX6 553 aaPredicted RBP6.91□□□□□ -1.3
SPARCL1-207ENST00000512317 NUCKS1Q9H1E3 243 aaKnown RBP6.91□□□□□ -1.3
SPARCL1-207ENST00000512317 GPRASP1Q5JY77 1395 aa6.91□□□□□ -1.3
SPARCL1-207ENST00000512317 SSH2Q76I76 1423 aa6.91□□□□□ -1.3
SPARCL1-207ENST00000512317 NWD2Q9ULI1 1742 aa6.9□□□□□ -1.3
SPARCL1-207ENST00000512317 IRS1P35568 1242 aa6.9□□□□□ -1.3
SPARCL1-207ENST00000512317 CENPCQ03188 943 aa6.9□□□□□ -1.3
SPARCL1-207ENST00000512317 USP4Q13107 963 aa6.9□□□□□ -1.3
SPARCL1-207ENST00000512317 SLFNL1Q499Z3 407 aa6.9□□□□□ -1.3
SPARCL1-207ENST00000512317 GNASQ5JWF2 1037 aa6.9□□□□□ -1.3
SPARCL1-207ENST00000512317 ZSCAN10Q96SZ4 725 aaPredicted RBP6.9□□□□□ -1.3
SPARCL1-207ENST00000512317 CDCA7Q9BWT1 371 aaPredicted RBP6.9□□□□□ -1.3
SPARCL1-207ENST00000512317 PDGFDQ9GZP0 370 aaPredicted RBP6.9□□□□□ -1.3
SPARCL1-207ENST00000512317 DOLKQ9UPQ8 538 aa6.9□□□□□ -1.3
SPARCL1-207ENST00000512317 SPATA31A1Q5TZJ5 1347 aa6.9□□□□□ -1.3
SPARCL1-207ENST00000512317 PIK3C2AO00443 1686 aa6.9□□□□□ -1.31
SPARCL1-207ENST00000512317 LMO7Q8WWI1 1683 aa6.9□□□□□ -1.31
SPARCL1-207ENST00000512317 QRICH2Q9H0J4 1663 aa6.9□□□□□ -1.31
SPARCL1-207ENST00000512317 IL2RAP01589 272 aa6.89□□□□□ -1.31
SPARCL1-207ENST00000512317 SRPK2P78362 688 aaKnown RBP6.89□□□□□ -1.31
SPARCL1-207ENST00000512317 TMEM214Q6NUQ4 689 aaKnown RBP6.89□□□□□ -1.31
SPARCL1-207ENST00000512317 XAGE2Q96GT9 111 aa6.89□□□□□ -1.31
SPARCL1-207ENST00000512317 CABP1Q9NZU7 370 aa6.89□□□□□ -1.31
SPARCL1-207ENST00000512317 USP19O94966 1318 aa6.89□□□□□ -1.31
SPARCL1-207ENST00000512317 POLR3AO14802 1390 aaPredicted RBP6.89□□□□□ -1.31
SPARCL1-207ENST00000512317 COL5A2P05997 1499 aaPredicted RBP6.88□□□□□ -1.31
SPARCL1-207ENST00000512317 CENPJQ9HC77 1338 aaPredicted RBP6.88□□□□□ -1.31
SPARCL1-207ENST00000512317 A0A1B0GTH6 734 aa6.88□□□□□ -1.31
SPARCL1-207ENST00000512317 BCRP11274 1271 aa6.88□□□□□ -1.31
SPARCL1-207ENST00000512317 MX2P20592 715 aa6.88□□□□□ -1.31
SPARCL1-207ENST00000512317 RNF135Q8IUD6 432 aa6.88□□□□□ -1.31
SPARCL1-207ENST00000512317 DNMT3AQ9Y6K1 912 aaPredicted RBP6.88□□□□□ -1.31
SPARCL1-207ENST00000512317 LRRC37A3O60309 1634 aa6.87□□□□□ -1.31
SPARCL1-207ENST00000512317 TRPM1Q7Z4N2 1603 aa6.87□□□□□ -1.31
SPARCL1-207ENST00000512317 USP6P35125 1406 aa6.87□□□□□ -1.31
SPARCL1-207ENST00000512317 CSB-PGBD3P0DP91 1061 aa6.87□□□□□ -1.31
SPARCL1-207ENST00000512317 FBLN1P23142 703 aa6.87□□□□□ -1.31
SPARCL1-207ENST00000512317 PHKA2P46019 1235 aa6.87□□□□□ -1.31
SPARCL1-207ENST00000512317 PGBD3Q8N328 593 aa6.87□□□□□ -1.31
SPARCL1-207ENST00000512317 ABTB2Q8N961 1025 aa6.87□□□□□ -1.31
SPARCL1-207ENST00000512317 LRRC4BQ9NT99 713 aa6.87□□□□□ -1.31
SPARCL1-207ENST00000512317 PHF24Q9UPV7 400 aa6.87□□□□□ -1.31
SPARCL1-207ENST00000512317 HRH3Q9Y5N1 445 aa6.87□□□□□ -1.31
SPARCL1-207ENST00000512317 UTRNP46939 3433 aa6.87□□□□□ -1.31
SPARCL1-207ENST00000512317 PHF20L1A8MW92 1017 aa6.86□□□□□ -1.31
SPARCL1-207ENST00000512317 MAP2K3P46734 347 aa6.86□□□□□ -1.31
SPARCL1-207ENST00000512317 FOXK2Q01167 660 aa6.86□□□□□ -1.31
SPARCL1-207ENST00000512317 IRF5Q13568 498 aa6.86□□□□□ -1.31
SPARCL1-207ENST00000512317 LBRQ14739 615 aaKnown RBP6.86□□□□□ -1.31
SPARCL1-207ENST00000512317 WASHC4Q2M389 1173 aa6.86□□□□□ -1.31
SPARCL1-207ENST00000512317 OXLD1Q5BKU9 147 aa6.86□□□□□ -1.31
SPARCL1-207ENST00000512317 PODNQ7Z5L7 613 aa6.86□□□□□ -1.31
SPARCL1-207ENST00000512317 PHTF2Q8N3S3 785 aa6.86□□□□□ -1.31
SPARCL1-207ENST00000512317 NEDD1Q8NHV4 660 aa6.86□□□□□ -1.31
SPARCL1-207ENST00000512317 CAMKK2Q96RR4 588 aa6.86□□□□□ -1.31
SPARCL1-207ENST00000512317 CFHR5Q9BXR6 569 aa6.86□□□□□ -1.31
SPARCL1-207ENST00000512317 GPAMQ9HCL2 828 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms