RNA–Protein interactions for RNA: ENST00000512293.1

PDLIM3-207, Transcript of PDZ and LIM domain 3, humanhuman

TSL 3

Gene PDLIM3, Length 581 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-207ENST00000512293 TBC1D10BQ4KMP7 808 aaPredicted RBP22.69■■□□□ 1.22
PDLIM3-207ENST00000512293 ZNF428Q96B54 188 aa22.69■■□□□ 1.22
PDLIM3-207ENST00000512293 EGFRP00533 1210 aa22.68■■□□□ 1.22
PDLIM3-207ENST00000512293 GOLGA2Q08379 1002 aa22.68■■□□□ 1.22
PDLIM3-207ENST00000512293 DCPSQ96C86 337 aaKnown RBP22.68■■□□□ 1.22
PDLIM3-207ENST00000512293 ZC3H12CQ9C0D7 883 aaKnown RBP22.68■■□□□ 1.22
PDLIM3-207ENST00000512293 PSME4Q14997 1843 aa22.68■■□□□ 1.22
PDLIM3-207ENST00000512293 CCDC85CA6NKD9 419 aa22.67■■□□□ 1.22
PDLIM3-207ENST00000512293 DDX10Q13206 875 aaKnown RBP22.67■■□□□ 1.22
PDLIM3-207ENST00000512293 DOK7Q18PE1 504 aa22.67■■□□□ 1.22
PDLIM3-207ENST00000512293 FAM161AQ3B820 660 aa22.67■■□□□ 1.22
PDLIM3-207ENST00000512293 RGMBQ6NW40 437 aa22.67■■□□□ 1.22
PDLIM3-207ENST00000512293 RIC3Q7Z5B4 369 aa22.67■■□□□ 1.22
PDLIM3-207ENST00000512293 C2orf69Q8N8R5 385 aa22.67■■□□□ 1.22
PDLIM3-207ENST00000512293 CCDC191Q8NCU4 936 aa22.67■■□□□ 1.22
PDLIM3-207ENST00000512293 CCDC102AQ96A19 550 aa22.67■■□□□ 1.22
PDLIM3-207ENST00000512293 GBA2Q9HCG7 927 aaPredicted RBP22.67■■□□□ 1.22
PDLIM3-207ENST00000512293 KCNQ5Q9NR82 932 aa22.67■■□□□ 1.22
PDLIM3-207ENST00000512293 IFT57Q9NWB7 429 aa22.67■■□□□ 1.22
PDLIM3-207ENST00000512293 FAM155AB1AL88 458 aaPredicted RBP22.66■■□□□ 1.22
PDLIM3-207ENST00000512293 CALD1Q05682 793 aaKnown RBP22.66■■□□□ 1.22
PDLIM3-207ENST00000512293 RTL5Q5HYW3 569 aaPredicted RBP22.66■■□□□ 1.22
PDLIM3-207ENST00000512293 SAGE1Q9NXZ1 904 aa22.66■■□□□ 1.22
PDLIM3-207ENST00000512293 PCCAP05165 728 aaPredicted RBP22.65■■□□□ 1.22
PDLIM3-207ENST00000512293 GNAI1P63096 354 aa22.65■■□□□ 1.22
PDLIM3-207ENST00000512293 KIF4BQ2VIQ3 1234 aa22.65■■□□□ 1.22
PDLIM3-207ENST00000512293 CCDC152Q4G0S7 254 aa22.65■■□□□ 1.22
PDLIM3-207ENST00000512293 ZIC5Q96T25 663 aa22.65■■□□□ 1.22
PDLIM3-207ENST00000512293 CHMP4AQ9BY43 222 aa22.65■■□□□ 1.22
PDLIM3-207ENST00000512293 MCOLN1Q9GZU1 580 aa22.65■■□□□ 1.22
PDLIM3-207ENST00000512293 MLLT1Q03111 559 aaPredicted RBP22.64■■□□□ 1.21
PDLIM3-207ENST00000512293 DLK2Q6UY11 383 aa22.64■■□□□ 1.21
PDLIM3-207ENST00000512293 AGBL3Q8NEM8 1001 aa22.64■■□□□ 1.21
PDLIM3-207ENST00000512293 PHAXQ9H814 394 aaKnown RBP22.64■■□□□ 1.21
PDLIM3-207ENST00000512293 SEC31BQ9NQW1 1179 aa22.64■■□□□ 1.21
PDLIM3-207ENST00000512293 GGA1Q9UJY5 639 aa22.64■■□□□ 1.21
PDLIM3-207ENST00000512293 PDE8AO60658 829 aa22.63■■□□□ 1.21
PDLIM3-207ENST00000512293 UFL1O94874 794 aa22.63■■□□□ 1.21
PDLIM3-207ENST00000512293 ZNF280AP59817 542 aaPredicted RBP22.63■■□□□ 1.21
PDLIM3-207ENST00000512293 ANKIB1Q9P2G1 1089 aa22.63■■□□□ 1.21
PDLIM3-207ENST00000512293 ADM5C9JUS6 153 aa22.62■■□□□ 1.21
PDLIM3-207ENST00000512293 RBM26Q5T8P6 1007 aaKnown RBP22.62■■□□□ 1.21
PDLIM3-207ENST00000512293 SULF1Q8IWU6 871 aa22.62■■□□□ 1.21
PDLIM3-207ENST00000512293 CWC25Q9NXE8 425 aaPredicted RBP22.62■■□□□ 1.21
PDLIM3-207ENST00000512293 AKAP11Q9UKA4 1901 aa22.61■■□□□ 1.21
PDLIM3-207ENST00000512293 RSBN1LQ6PCB5 846 aaPredicted RBP22.61■■□□□ 1.21
PDLIM3-207ENST00000512293 MYD88Q99836 296 aa22.61■■□□□ 1.21
PDLIM3-207ENST00000512293 METTL22Q9BUU2 404 aaPredicted RBP22.61■■□□□ 1.21
PDLIM3-207ENST00000512293 XDHP47989 1333 aa22.6■■□□□ 1.21
PDLIM3-207ENST00000512293 G3V3G9 751 aa22.6■■□□□ 1.21
PDLIM3-207ENST00000512293 DDX58O95786 925 aaKnown RBP22.6■■□□□ 1.21
PDLIM3-207ENST00000512293 ZNF157P51786 506 aaPredicted RBP22.6■■□□□ 1.21
PDLIM3-207ENST00000512293 DGKZQ13574 1117 aa22.6■■□□□ 1.21
PDLIM3-207ENST00000512293 DCAF8Q5TAQ9 597 aa22.6■■□□□ 1.21
PDLIM3-207ENST00000512293 REM2Q8IYK8 340 aaPredicted RBP22.6■■□□□ 1.21
PDLIM3-207ENST00000512293 GMLQ99445 158 aa22.6■■□□□ 1.21
PDLIM3-207ENST00000512293 GGA3Q9NZ52 723 aa22.6■■□□□ 1.21
PDLIM3-207ENST00000512293 SLC10A3P09131 477 aa22.59■■□□□ 1.21
PDLIM3-207ENST00000512293 PODNQ7Z5L7 613 aa22.59■■□□□ 1.21
PDLIM3-207ENST00000512293 PRKRIP1Q9H875 184 aaPredicted RBP22.59■■□□□ 1.21
PDLIM3-207ENST00000512293 PITPNM2Q9BZ72 1349 aa22.58■■□□□ 1.21
PDLIM3-207ENST00000512293 APAF1O14727 1248 aa22.58■■□□□ 1.21
PDLIM3-207ENST00000512293 ATP2B4P23634 1241 aa22.58■■□□□ 1.21
PDLIM3-207ENST00000512293 FKBP1BP68106 108 aa22.58■■□□□ 1.21
PDLIM3-207ENST00000512293 KIF23Q02241 960 aaPredicted RBP22.58■■□□□ 1.21
PDLIM3-207ENST00000512293 CCDC30Q5VVM6 783 aa22.58■■□□□ 1.21
PDLIM3-207ENST00000512293 ANKRD18AQ8IVF6 992 aa22.58■■□□□ 1.21
PDLIM3-207ENST00000512293 CDCA5Q96FF9 252 aa22.58■■□□□ 1.21
PDLIM3-207ENST00000512293 MYH3P11055 1940 aa22.57■■□□□ 1.2
PDLIM3-207ENST00000512293 C8orf58Q8NAV2 365 aa22.57■■□□□ 1.2
PDLIM3-207ENST00000512293 ELL2O00472 640 aaPredicted RBP22.56■■□□□ 1.2
PDLIM3-207ENST00000512293 SLC34A2O95436 690 aa22.56■■□□□ 1.2
PDLIM3-207ENST00000512293 USP17L8P0C7I0 530 aa22.56■■□□□ 1.2
PDLIM3-207ENST00000512293 SCARF1Q14162 830 aa22.56■■□□□ 1.2
PDLIM3-207ENST00000512293 RNF186Q9NXI6 227 aa22.56■■□□□ 1.2
PDLIM3-207ENST00000512293 ASTN2O75129 1339 aaPredicted RBP22.56■■□□□ 1.2
PDLIM3-207ENST00000512293 PAPPA2Q9BXP8 1791 aa22.55■■□□□ 1.2
PDLIM3-207ENST00000512293 USP17L3A6NCW0 530 aa22.55■■□□□ 1.2
PDLIM3-207ENST00000512293 USP17L4A6NCW7 530 aa22.55■■□□□ 1.2
PDLIM3-207ENST00000512293 ANGEL2Q5VTE6 544 aaKnown RBP22.55■■□□□ 1.2
PDLIM3-207ENST00000512293 USP17L1Q7RTZ2 530 aa22.55■■□□□ 1.2
PDLIM3-207ENST00000512293 CDC5LQ99459 802 aaKnown RBP22.55■■□□□ 1.2
PDLIM3-207ENST00000512293 MYOZ2Q9NPC6 264 aa22.55■■□□□ 1.2
PDLIM3-207ENST00000512293 TNRC18O15417 2968 aaPredicted RBP22.54■■□□□ 1.2
PDLIM3-207ENST00000512293 MED23Q9ULK4 1368 aa22.54■■□□□ 1.2
PDLIM3-207ENST00000512293 CTSWP56202 376 aa22.54■■□□□ 1.2
PDLIM3-207ENST00000512293 CSRNP1Q96S65 589 aa22.54■■□□□ 1.2
PDLIM3-207ENST00000512293 BSDC1Q9NW68 430 aaPredicted RBP22.54■■□□□ 1.2
PDLIM3-207ENST00000512293 MMP14P50281 582 aa22.53■■□□□ 1.2
PDLIM3-207ENST00000512293 KSR2Q6VAB6 950 aa22.53■■□□□ 1.2
PDLIM3-207ENST00000512293 MAP3K2Q9Y2U5 619 aa22.53■■□□□ 1.2
PDLIM3-207ENST00000512293 ZNF646O15015 1829 aaPredicted RBP22.52■■□□□ 1.2
PDLIM3-207ENST00000512293 TRPA1O75762 1119 aa22.52■■□□□ 1.2
PDLIM3-207ENST00000512293 IGKV5-2P06315 115 aa22.52■■□□□ 1.2
PDLIM3-207ENST00000512293 TTLL11Q8NHH1 800 aa22.52■■□□□ 1.2
PDLIM3-207ENST00000512293 CCDC85AQ96PX6 553 aaPredicted RBP22.52■■□□□ 1.2
PDLIM3-207ENST00000512293 RASAL3Q86YV0 1011 aa22.51■■□□□ 1.19
PDLIM3-207ENST00000512293 JARID2Q92833 1246 aaPredicted RBP22.51■■□□□ 1.19
PDLIM3-207ENST00000512293 MINPP1Q9UNW1 487 aa22.51■■□□□ 1.19
PDLIM3-207ENST00000512293 PI4KAP2A4QPH2 592 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms