RNA–Protein interactions for RNA: ENST00000512234.1

SQSTM1-214, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 1,722 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-214ENST00000512234 SBF1O95248 1867 aa19.23■□□□□ 0.67
SQSTM1-214ENST00000512234 CCDC88AQ3V6T2 1871 aa19.23■□□□□ 0.67
SQSTM1-214ENST00000512234 C6orf229H3BNL8 230 aa19.23■□□□□ 0.67
SQSTM1-214ENST00000512234 GNAI3P08754 354 aa19.23■□□□□ 0.67
SQSTM1-214ENST00000512234 RFX5P48382 616 aaPredicted RBP19.23■□□□□ 0.67
SQSTM1-214ENST00000512234 RRP1P56182 461 aaKnown RBP19.23■□□□□ 0.67
SQSTM1-214ENST00000512234 MVPQ14764 893 aaKnown RBP19.22■□□□□ 0.67
SQSTM1-214ENST00000512234 LDHAL6AQ6ZMR3 332 aa19.22■□□□□ 0.67
SQSTM1-214ENST00000512234 SIL1Q9H173 461 aa19.22■□□□□ 0.67
SQSTM1-214ENST00000512234 DUOX1Q9NRD9 1551 aa19.22■□□□□ 0.67
SQSTM1-214ENST00000512234 PNMA6EA0A0J9YXQ4 647 aa19.22■□□□□ 0.67
SQSTM1-214ENST00000512234 GNAI2P04899 355 aa19.22■□□□□ 0.67
SQSTM1-214ENST00000512234 IARSP41252 1262 aaKnown RBP19.22■□□□□ 0.67
SQSTM1-214ENST00000512234 CHRNDQ07001 517 aa19.22■□□□□ 0.67
SQSTM1-214ENST00000512234 CC2D2BQ6DHV5 1058 aa19.22■□□□□ 0.67
SQSTM1-214ENST00000512234 TBC1D16Q8TBP0 767 aa19.22■□□□□ 0.67
SQSTM1-214ENST00000512234 PSMD1Q99460 953 aa19.22■□□□□ 0.67
SQSTM1-214ENST00000512234 CHD4Q14839 1912 aa19.22■□□□□ 0.67
SQSTM1-214ENST00000512234 LTBP3Q9NS15 1303 aa19.21■□□□□ 0.67
SQSTM1-214ENST00000512234 UFL1O94874 794 aa19.21■□□□□ 0.67
SQSTM1-214ENST00000512234 KLRK1P26718 216 aa19.21■□□□□ 0.67
SQSTM1-214ENST00000512234 CNNM1Q9NRU3 951 aa19.21■□□□□ 0.67
SQSTM1-214ENST00000512234 SUPT16HQ9Y5B9 1047 aaKnown RBP19.21■□□□□ 0.67
SQSTM1-214ENST00000512234 LRRC37AA6NMS7 1700 aa19.2■□□□□ 0.66
SQSTM1-214ENST00000512234 PPIP5K2O43314 1243 aa19.2■□□□□ 0.66
SQSTM1-214ENST00000512234 TMC4Q7Z404 712 aa19.2■□□□□ 0.66
SQSTM1-214ENST00000512234 PTPN12Q05209 780 aaKnown RBP19.2■□□□□ 0.66
SQSTM1-214ENST00000512234 DOK7Q18PE1 504 aa19.2■□□□□ 0.66
SQSTM1-214ENST00000512234 LARGE2Q8N3Y3 721 aa19.2■□□□□ 0.66
SQSTM1-214ENST00000512234 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.2■□□□□ 0.66
SQSTM1-214ENST00000512234 RTFDC1Q9BY42 306 aaPredicted RBP19.2■□□□□ 0.66
SQSTM1-214ENST00000512234 SRGAP3O43295 1099 aa19.19■□□□□ 0.66
SQSTM1-214ENST00000512234 TXNRD3Q86VQ6 643 aa19.19■□□□□ 0.66
SQSTM1-214ENST00000512234 GGA1Q9UJY5 639 aa19.19■□□□□ 0.66
SQSTM1-214ENST00000512234 DBNDD1Q9H9R9 158 aa19.18■□□□□ 0.66
SQSTM1-214ENST00000512234 KCNQ5Q9NR82 932 aa19.18■□□□□ 0.66
SQSTM1-214ENST00000512234 XDHP47989 1333 aa19.18■□□□□ 0.66
SQSTM1-214ENST00000512234 MS4A1P11836 297 aa19.17■□□□□ 0.66
SQSTM1-214ENST00000512234 PDE3AQ14432 1141 aa19.17■□□□□ 0.66
SQSTM1-214ENST00000512234 WASHC4Q2M389 1173 aa19.17■□□□□ 0.66
SQSTM1-214ENST00000512234 PODXL2Q9NZ53 605 aa19.17■□□□□ 0.66
SQSTM1-214ENST00000512234 RIPOR2Q9Y4F9 1068 aa19.17■□□□□ 0.66
SQSTM1-214ENST00000512234 ZNF541Q9H0D2 1346 aa19.17■□□□□ 0.66
SQSTM1-214ENST00000512234 IRX6P78412 446 aaPredicted RBP19.17■□□□□ 0.66
SQSTM1-214ENST00000512234 LTBP1Q14766 1721 aa19.16■□□□□ 0.66
SQSTM1-214ENST00000512234 ZNF784Q8NCA9 323 aaPredicted RBP19.16■□□□□ 0.66
SQSTM1-214ENST00000512234 CRBNQ96SW2 442 aa19.16■□□□□ 0.66
SQSTM1-214ENST00000512234 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.16■□□□□ 0.66
SQSTM1-214ENST00000512234 DDNO94850 711 aaPredicted RBP19.15■□□□□ 0.66
SQSTM1-214ENST00000512234 KIAA2012Q0VF49 1180 aa19.15■□□□□ 0.66
SQSTM1-214ENST00000512234 ATG9AQ7Z3C6 839 aa19.15■□□□□ 0.66
SQSTM1-214ENST00000512234 ZBTB40Q9NUA8 1239 aa19.15■□□□□ 0.66
SQSTM1-214ENST00000512234 DDX19BQ9UMR2 479 aa19.15■□□□□ 0.66
SQSTM1-214ENST00000512234 ZNF804BA4D1E1 1349 aa19.14■□□□□ 0.65
SQSTM1-214ENST00000512234 TIAM2Q8IVF5 1701 aa19.14■□□□□ 0.65
SQSTM1-214ENST00000512234 YDJCA8MPS7 323 aa19.14■□□□□ 0.65
SQSTM1-214ENST00000512234 EYA2O00167 538 aa19.14■□□□□ 0.65
SQSTM1-214ENST00000512234 ATP2B4P23634 1241 aa19.14■□□□□ 0.65
SQSTM1-214ENST00000512234 METTL24Q5JXM2 366 aa19.14■□□□□ 0.65
SQSTM1-214ENST00000512234 CEP85Q6P2H3 762 aa19.14■□□□□ 0.65
SQSTM1-214ENST00000512234 SUPT20HQ8NEM7 779 aa19.14■□□□□ 0.65
SQSTM1-214ENST00000512234 JDP2Q8WYK2 163 aa19.14■□□□□ 0.65
SQSTM1-214ENST00000512234 RAD17O75943 681 aa19.13■□□□□ 0.65
SQSTM1-214ENST00000512234 KCNJ4P48050 445 aa19.13■□□□□ 0.65
SQSTM1-214ENST00000512234 ATP8B2P98198 1209 aa19.13■□□□□ 0.65
SQSTM1-214ENST00000512234 MTX1Q13505 466 aa19.13■□□□□ 0.65
SQSTM1-214ENST00000512234 GRIPAP1Q4V328 841 aa19.13■□□□□ 0.65
SQSTM1-214ENST00000512234 NIM1KQ8IY84 436 aa19.13■□□□□ 0.65
SQSTM1-214ENST00000512234 ZC3H12CQ9C0D7 883 aaKnown RBP19.13■□□□□ 0.65
SQSTM1-214ENST00000512234 ANKRD2Q9GZV1 360 aa19.13■□□□□ 0.65
SQSTM1-214ENST00000512234 NMRK2Q9NPI5 230 aa19.13■□□□□ 0.65
SQSTM1-214ENST00000512234 SIRT2Q8IXJ6 389 aa19.12■□□□□ 0.65
SQSTM1-214ENST00000512234 HDAC5Q9UQL6 1122 aa19.12■□□□□ 0.65
SQSTM1-214ENST00000512234 GJA3Q9Y6H8 435 aa19.12■□□□□ 0.65
SQSTM1-214ENST00000512234 FZD9O00144 591 aa19.11■□□□□ 0.65
SQSTM1-214ENST00000512234 ECE2O60344 883 aa19.11■□□□□ 0.65
SQSTM1-214ENST00000512234 POLA2Q14181 598 aa19.11■□□□□ 0.65
SQSTM1-214ENST00000512234 VGLL2Q8N8G2 317 aa19.11■□□□□ 0.65
SQSTM1-214ENST00000512234 COPRSQ9NQ92 184 aa19.11■□□□□ 0.65
SQSTM1-214ENST00000512234 DICER1Q9UPY3 1922 aaKnown RBP19.1■□□□□ 0.65
SQSTM1-214ENST00000512234 CXCL9Q07325 125 aa19.1■□□□□ 0.65
SQSTM1-214ENST00000512234 EYA3Q99504 573 aa19.1■□□□□ 0.65
SQSTM1-214ENST00000512234 BCL11AQ9H165 835 aa19.1■□□□□ 0.65
SQSTM1-214ENST00000512234 RRAGCQ9HB90 399 aa19.1■□□□□ 0.65
SQSTM1-214ENST00000512234 ZNRF3Q9ULT6 936 aa19.1■□□□□ 0.65
SQSTM1-214ENST00000512234 LEMD3Q9Y2U8 911 aa19.1■□□□□ 0.65
SQSTM1-214ENST00000512234 A0A1B0GUL6 1792 aa19.09■□□□□ 0.65
SQSTM1-214ENST00000512234 GLTPD2A6NH11 291 aa19.09■□□□□ 0.65
SQSTM1-214ENST00000512234 GYG1P46976 350 aa19.09■□□□□ 0.65
SQSTM1-214ENST00000512234 SSH3Q8TE77 659 aa19.09■□□□□ 0.65
SQSTM1-214ENST00000512234 MXD3Q9BW11 206 aa19.09■□□□□ 0.65
SQSTM1-214ENST00000512234 JAG2Q9Y219 1238 aa19.09■□□□□ 0.65
SQSTM1-214ENST00000512234 MROH5Q6ZUA9 1318 aa19.09■□□□□ 0.65
SQSTM1-214ENST00000512234 IRS2Q9Y4H2 1338 aa19.09■□□□□ 0.65
SQSTM1-214ENST00000512234 G3V3G9 751 aa19.08■□□□□ 0.65
SQSTM1-214ENST00000512234 TFCP2Q12800 502 aa19.08■□□□□ 0.65
SQSTM1-214ENST00000512234 DCAF8Q5TAQ9 597 aa19.08■□□□□ 0.65
SQSTM1-214ENST00000512234 PDE8BO95263 885 aa19.08■□□□□ 0.64
SQSTM1-214ENST00000512234 EXOC6Q8TAG9 804 aa19.08■□□□□ 0.64
SQSTM1-214ENST00000512234 GPBP1L1Q9HC44 474 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms