RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 ZC3H4Q9UPT8 1303 aaKnown RBP16.07■□□□□ 0.16
COL6A6-203ENST00000511332 PSME4Q14997 1843 aa16.07■□□□□ 0.16
COL6A6-203ENST00000511332 C9orf131Q5VYM1 1079 aa16.06■□□□□ 0.16
COL6A6-203ENST00000511332 RTFDC1Q9BY42 306 aaPredicted RBP16.06■□□□□ 0.16
COL6A6-203ENST00000511332 VPS33BQ9H267 617 aa16.06■□□□□ 0.16
COL6A6-203ENST00000511332 PODXL2Q9NZ53 605 aa16.06■□□□□ 0.16
COL6A6-203ENST00000511332 NSFL1CQ9UNZ2 370 aaKnown RBP16.06■□□□□ 0.16
COL6A6-203ENST00000511332 COG6Q9Y2V7 657 aa16.06■□□□□ 0.16
COL6A6-203ENST00000511332 ZBTB7BO15156 539 aaPredicted RBP16.05■□□□□ 0.16
COL6A6-203ENST00000511332 IARSP41252 1262 aaKnown RBP16.05■□□□□ 0.16
COL6A6-203ENST00000511332 GPSM2P81274 684 aa16.05■□□□□ 0.16
COL6A6-203ENST00000511332 MTX1Q13505 466 aa16.05■□□□□ 0.16
COL6A6-203ENST00000511332 LDHAL6AQ6ZMR3 332 aa16.05■□□□□ 0.16
COL6A6-203ENST00000511332 ANKRD2Q9GZV1 360 aa16.05■□□□□ 0.16
COL6A6-203ENST00000511332 ZNF277Q9NRM2 450 aaPredicted RBP16.05■□□□□ 0.16
COL6A6-203ENST00000511332 CNNM1Q9NRU3 951 aa16.05■□□□□ 0.16
COL6A6-203ENST00000511332 ARAP2Q8WZ64 1704 aa16.05■□□□□ 0.16
COL6A6-203ENST00000511332 C20orf194Q5TEA3 1177 aa16.04■□□□□ 0.16
COL6A6-203ENST00000511332 ZNF594Q96JF6 807 aaPredicted RBP16.04■□□□□ 0.16
COL6A6-203ENST00000511332 EYA3Q99504 573 aa16.04■□□□□ 0.16
COL6A6-203ENST00000511332 GGA1Q9UJY5 639 aa16.04■□□□□ 0.16
COL6A6-203ENST00000511332 MINPP1Q9UNW1 487 aa16.04■□□□□ 0.16
COL6A6-203ENST00000511332 MYH13Q9UKX3 1938 aa16.04■□□□□ 0.16
COL6A6-203ENST00000511332 COL4A5P29400 1685 aa16.03■□□□□ 0.16
COL6A6-203ENST00000511332 SRGAP3O43295 1099 aa16.03■□□□□ 0.16
COL6A6-203ENST00000511332 UFL1O94874 794 aa16.03■□□□□ 0.16
COL6A6-203ENST00000511332 YY1P25490 414 aa16.03■□□□□ 0.16
COL6A6-203ENST00000511332 PRELPP51888 382 aa16.03■□□□□ 0.16
COL6A6-203ENST00000511332 MROH5Q6ZUA9 1318 aa16.02■□□□□ 0.16
COL6A6-203ENST00000511332 C6orf229H3BNL8 230 aa16.02■□□□□ 0.16
COL6A6-203ENST00000511332 PPIP5K2O43314 1243 aa16.02■□□□□ 0.16
COL6A6-203ENST00000511332 ATP2B4P23634 1241 aa16.02■□□□□ 0.16
COL6A6-203ENST00000511332 RFX5P48382 616 aaPredicted RBP16.02■□□□□ 0.16
COL6A6-203ENST00000511332 CHRNDQ07001 517 aa16.02■□□□□ 0.16
COL6A6-203ENST00000511332 LARGE2Q8N3Y3 721 aa16.02■□□□□ 0.16
COL6A6-203ENST00000511332 TBC1D16Q8TBP0 767 aa16.02■□□□□ 0.16
COL6A6-203ENST00000511332 JDP2Q8WYK2 163 aa16.02■□□□□ 0.16
COL6A6-203ENST00000511332 C1orf115Q9H7X2 142 aa16.02■□□□□ 0.16
COL6A6-203ENST00000511332 FBXO3Q9UK99 471 aa16.02■□□□□ 0.16
COL6A6-203ENST00000511332 MED23Q9ULK4 1368 aa16.01■□□□□ 0.15
COL6A6-203ENST00000511332 KCNJ4P48050 445 aa16.01■□□□□ 0.15
COL6A6-203ENST00000511332 KIAA2012Q0VF49 1180 aa16.01■□□□□ 0.15
COL6A6-203ENST00000511332 AOC3Q16853 763 aa16.01■□□□□ 0.15
COL6A6-203ENST00000511332 WASHC4Q2M389 1173 aa16.01■□□□□ 0.15
COL6A6-203ENST00000511332 POLLQ9UGP5 575 aa16.01■□□□□ 0.15
COL6A6-203ENST00000511332 LEMD3Q9Y2U8 911 aa16.01■□□□□ 0.15
COL6A6-203ENST00000511332 CIAO1O76071 339 aa16■□□□□ 0.15
COL6A6-203ENST00000511332 PTPN12Q05209 780 aaKnown RBP16■□□□□ 0.15
COL6A6-203ENST00000511332 NIM1KQ8IY84 436 aa16■□□□□ 0.15
COL6A6-203ENST00000511332 KLHDC4Q8TBB5 520 aa16■□□□□ 0.15
COL6A6-203ENST00000511332 COPRSQ9NQ92 184 aa16■□□□□ 0.15
COL6A6-203ENST00000511332 ZBTB40Q9NUA8 1239 aa16■□□□□ 0.15
COL6A6-203ENST00000511332 WDR90Q96KV7 1748 aa15.99■□□□□ 0.15
COL6A6-203ENST00000511332 ZNF804BA4D1E1 1349 aa15.99■□□□□ 0.15
COL6A6-203ENST00000511332 ZNF646O15015 1829 aaPredicted RBP15.99■□□□□ 0.15
COL6A6-203ENST00000511332 EYA2O00167 538 aa15.99■□□□□ 0.15
COL6A6-203ENST00000511332 METTL24Q5JXM2 366 aa15.99■□□□□ 0.15
COL6A6-203ENST00000511332 PUS3Q9BZE2 481 aaKnown RBP15.99■□□□□ 0.15
COL6A6-203ENST00000511332 RIPOR2Q9Y4F9 1068 aa15.99■□□□□ 0.15
COL6A6-203ENST00000511332 SCN4AP35499 1836 aa15.98■□□□□ 0.15
COL6A6-203ENST00000511332 SCN9AQ15858 1988 aa15.98■□□□□ 0.15
COL6A6-203ENST00000511332 PNMA6EA0A0J9YXQ4 647 aa15.98■□□□□ 0.15
COL6A6-203ENST00000511332 ATP8B2P98198 1209 aa15.98■□□□□ 0.15
COL6A6-203ENST00000511332 LRRC24Q50LG9 513 aa15.98■□□□□ 0.15
COL6A6-203ENST00000511332 CEP85Q6P2H3 762 aa15.98■□□□□ 0.15
COL6A6-203ENST00000511332 SSH3Q8TE77 659 aa15.98■□□□□ 0.15
COL6A6-203ENST00000511332 ZC3H12CQ9C0D7 883 aaKnown RBP15.98■□□□□ 0.15
COL6A6-203ENST00000511332 SIL1Q9H173 461 aa15.98■□□□□ 0.15
COL6A6-203ENST00000511332 IL15P40933 162 aaPredicted RBP15.97■□□□□ 0.15
COL6A6-203ENST00000511332 POLA2Q14181 598 aa15.97■□□□□ 0.15
COL6A6-203ENST00000511332 SUPT16HQ9Y5B9 1047 aaKnown RBP15.97■□□□□ 0.15
COL6A6-203ENST00000511332 KDM2BQ8NHM5 1336 aa15.96■□□□□ 0.15
COL6A6-203ENST00000511332 G3V3G9 751 aa15.96■□□□□ 0.15
COL6A6-203ENST00000511332 FZD9O00144 591 aa15.96■□□□□ 0.15
COL6A6-203ENST00000511332 RIMBP2O15034 1052 aa15.96■□□□□ 0.15
COL6A6-203ENST00000511332 HMMRO75330 724 aa15.96■□□□□ 0.15
COL6A6-203ENST00000511332 TAF5LO75529 589 aa15.96■□□□□ 0.15
COL6A6-203ENST00000511332 EIF6P56537 245 aaKnown RBP15.96■□□□□ 0.15
COL6A6-203ENST00000511332 DCAF8Q5TAQ9 597 aa15.96■□□□□ 0.15
COL6A6-203ENST00000511332 DPY19L2Q6NUT2 758 aa15.96■□□□□ 0.15
COL6A6-203ENST00000511332 RPAP2Q8IXW5 612 aaPredicted RBP15.96■□□□□ 0.15
COL6A6-203ENST00000511332 VGLL2Q8N8G2 317 aa15.96■□□□□ 0.15
COL6A6-203ENST00000511332 HELBQ8NG08 1087 aaPredicted RBP15.96■□□□□ 0.15
COL6A6-203ENST00000511332 GPR101Q96P66 508 aaPredicted RBP15.96■□□□□ 0.15
COL6A6-203ENST00000511332 ZNRF3Q9ULT6 936 aa15.96■□□□□ 0.15
COL6A6-203ENST00000511332 PA2G4Q9UQ80 394 aaKnown RBP15.96■□□□□ 0.15
COL6A6-203ENST00000511332 PDE8BO95263 885 aa15.95■□□□□ 0.14
COL6A6-203ENST00000511332 UBE4AQ14139 1066 aa15.95■□□□□ 0.14
COL6A6-203ENST00000511332 PUM3Q15397 648 aaKnown RBP15.95■□□□□ 0.14
COL6A6-203ENST00000511332 C15orf52Q6ZUT6 534 aaKnown RBP15.95■□□□□ 0.14
COL6A6-203ENST00000511332 ATG9AQ7Z3C6 839 aa15.95■□□□□ 0.14
COL6A6-203ENST00000511332 ZNF541Q9H0D2 1346 aa15.94■□□□□ 0.14
COL6A6-203ENST00000511332 GLTPD2A6NH11 291 aa15.94■□□□□ 0.14
COL6A6-203ENST00000511332 ECE2O60344 883 aa15.94■□□□□ 0.14
COL6A6-203ENST00000511332 AAMPQ13685 434 aa15.94■□□□□ 0.14
COL6A6-203ENST00000511332 CRBNQ96SW2 442 aa15.94■□□□□ 0.14
COL6A6-203ENST00000511332 DBNDD1Q9H9R9 158 aa15.94■□□□□ 0.14
COL6A6-203ENST00000511332 CEP126Q9P2H0 1117 aa15.94■□□□□ 0.14
COL6A6-203ENST00000511332 G3BP1Q13283 466 aaKnown RBP eCLIP15.93■□□□□ 0.14
COL6A6-203ENST00000511332 OS9Q13438 667 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms