RNA–Protein interactions for RNA: ENST00000510679.1

SMN1-207, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 3

Gene SMN1, Length 1,045 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-207ENST00000510679 LTBP3Q9NS15 1303 aa13.44□□□□□ -0.26
SMN1-207ENST00000510679 HOXA10P31260 410 aaPredicted RBP13.44□□□□□ -0.26
SMN1-207ENST00000510679 RTKN2Q8IZC4 609 aa13.44□□□□□ -0.26
SMN1-207ENST00000510679 LARP6Q9BRS8 491 aaKnown RBP13.44□□□□□ -0.26
SMN1-207ENST00000510679 ISCA1Q9BUE6 129 aa13.44□□□□□ -0.26
SMN1-207ENST00000510679 PHAXQ9H814 394 aaKnown RBP13.44□□□□□ -0.26
SMN1-207ENST00000510679 NUP98P52948 1817 aa13.43□□□□□ -0.26
SMN1-207ENST00000510679 KDM2BQ8NHM5 1336 aa13.43□□□□□ -0.26
SMN1-207ENST00000510679 RASSF7Q02833 373 aa13.43□□□□□ -0.26
SMN1-207ENST00000510679 NEXNQ0ZGT2 675 aa13.43□□□□□ -0.26
SMN1-207ENST00000510679 ANKRD31Q8N7Z5 1873 aa13.43□□□□□ -0.26
SMN1-207ENST00000510679 OXER1Q8TDS5 423 aa13.43□□□□□ -0.26
SMN1-207ENST00000510679 BBXQ8WY36 941 aaPredicted RBP13.43□□□□□ -0.26
SMN1-207ENST00000510679 CRAMP1Q96RY5 1269 aa13.43□□□□□ -0.26
SMN1-207ENST00000510679 ATP5J2-PTCD1G3V325 749 aa13.42□□□□□ -0.26
SMN1-207ENST00000510679 NFKBIEO00221 500 aa13.42□□□□□ -0.26
SMN1-207ENST00000510679 LSM11P83369 360 aaKnown RBP eCLIP13.42□□□□□ -0.26
SMN1-207ENST00000510679 EXOSC9Q06265 439 aaKnown RBP13.42□□□□□ -0.26
SMN1-207ENST00000510679 DIEXFQ68CQ4 756 aaKnown RBP13.42□□□□□ -0.26
SMN1-207ENST00000510679 KSR2Q6VAB6 950 aa13.42□□□□□ -0.26
SMN1-207ENST00000510679 CCDC191Q8NCU4 936 aa13.42□□□□□ -0.26
SMN1-207ENST00000510679 ZNF526Q8TF50 670 aaPredicted RBP13.42□□□□□ -0.26
SMN1-207ENST00000510679 DDX27Q96GQ7 796 aaKnown RBP13.42□□□□□ -0.26
SMN1-207ENST00000510679 MYD88Q99836 296 aa13.42□□□□□ -0.26
SMN1-207ENST00000510679 E9PSI1 815 aa13.41□□□□□ -0.26
SMN1-207ENST00000510679 VAMP4O75379 141 aa13.41□□□□□ -0.26
SMN1-207ENST00000510679 DDX46Q7L014 1031 aaKnown RBP13.41□□□□□ -0.26
SMN1-207ENST00000510679 C7orf43Q8WVR3 580 aa13.41□□□□□ -0.26
SMN1-207ENST00000510679 METTL22Q9BUU2 404 aaPredicted RBP13.41□□□□□ -0.26
SMN1-207ENST00000510679 COL11A2P13942 1736 aaPredicted RBP13.41□□□□□ -0.26
SMN1-207ENST00000510679 ZNF521Q96K83 1311 aa13.4□□□□□ -0.26
SMN1-207ENST00000510679 PI4KAP2A4QPH2 592 aa13.4□□□□□ -0.26
SMN1-207ENST00000510679 BBOX1O75936 387 aa13.4□□□□□ -0.26
SMN1-207ENST00000510679 HCLS1P14317 486 aaPredicted RBP13.4□□□□□ -0.26
SMN1-207ENST00000510679 FKBP4Q02790 459 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMN1-207ENST00000510679 TMC4Q7Z404 712 aa13.4□□□□□ -0.26
SMN1-207ENST00000510679 PI4KAP1Q8N8J0 262 aa13.4□□□□□ -0.26
SMN1-207ENST00000510679 ZBTB38Q8NAP3 1195 aaPredicted RBP13.4□□□□□ -0.26
SMN1-207ENST00000510679 CWC25Q9NXE8 425 aaPredicted RBP13.4□□□□□ -0.26
SMN1-207ENST00000510679 MAP3K2Q9Y2U5 619 aa13.4□□□□□ -0.26
SMN1-207ENST00000510679 IRS4O14654 1257 aaPredicted RBP13.39□□□□□ -0.27
SMN1-207ENST00000510679 PPEF1O14829 653 aaPredicted RBP13.39□□□□□ -0.27
SMN1-207ENST00000510679 FLIIQ13045 1269 aa13.39□□□□□ -0.27
SMN1-207ENST00000510679 FKBP5Q13451 457 aaPredicted RBP13.39□□□□□ -0.27
SMN1-207ENST00000510679 FAM89AQ96GI7 184 aa13.39□□□□□ -0.27
SMN1-207ENST00000510679 PSMD1Q99460 953 aa13.39□□□□□ -0.27
SMN1-207ENST00000510679 TCERG1O14776 1098 aaKnown RBP13.38□□□□□ -0.27
SMN1-207ENST00000510679 PCCAP05165 728 aaPredicted RBP13.38□□□□□ -0.27
SMN1-207ENST00000510679 C1QTNF8P60827 252 aa13.38□□□□□ -0.27
SMN1-207ENST00000510679 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
SMN1-207ENST00000510679 ANKRD36CQ5JPF3 1778 aa13.37□□□□□ -0.27
SMN1-207ENST00000510679 GLTPD2A6NH11 291 aa13.37□□□□□ -0.27
SMN1-207ENST00000510679 GRAPQ13588 217 aa13.37□□□□□ -0.27
SMN1-207ENST00000510679 PPP4R3BQ5MIZ7 849 aa13.37□□□□□ -0.27
SMN1-207ENST00000510679 C16orf71Q8IYS4 520 aaPredicted RBP13.37□□□□□ -0.27
SMN1-207ENST00000510679 GRAPLQ8TC17 118 aaPredicted RBP13.37□□□□□ -0.27
SMN1-207ENST00000510679 RNF166Q96A37 237 aaPredicted RBP13.37□□□□□ -0.27
SMN1-207ENST00000510679 ZNF428Q96B54 188 aa13.37□□□□□ -0.27
SMN1-207ENST00000510679 ATP6V0A2Q9Y487 856 aa13.37□□□□□ -0.27
SMN1-207ENST00000510679 TNRC6CQ9HCJ0 1690 aaKnown RBP13.37□□□□□ -0.27
SMN1-207ENST00000510679 ABCC4O15439 1325 aa13.37□□□□□ -0.27
SMN1-207ENST00000510679 MFSD10Q14728 455 aa13.36□□□□□ -0.27
SMN1-207ENST00000510679 SUPT20HQ8NEM7 779 aa13.36□□□□□ -0.27
SMN1-207ENST00000510679 DNAAF4Q8WXU2 420 aa13.36□□□□□ -0.27
SMN1-207ENST00000510679 JDP2Q8WYK2 163 aa13.36□□□□□ -0.27
SMN1-207ENST00000510679 VPS33BQ9H267 617 aa13.36□□□□□ -0.27
SMN1-207ENST00000510679 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.36□□□□□ -0.27
SMN1-207ENST00000510679 CDHR2Q9BYE9 1310 aa13.36□□□□□ -0.27
SMN1-207ENST00000510679 ARFGEF2Q9Y6D5 1785 aa13.35□□□□□ -0.27
SMN1-207ENST00000510679 SLX4Q8IY92 1834 aa13.35□□□□□ -0.27
SMN1-207ENST00000510679 PDE8AO60658 829 aa13.35□□□□□ -0.27
SMN1-207ENST00000510679 TOMM70O94826 608 aa13.35□□□□□ -0.27
SMN1-207ENST00000510679 IARSP41252 1262 aaKnown RBP13.35□□□□□ -0.27
SMN1-207ENST00000510679 PRELPP51888 382 aa13.35□□□□□ -0.27
SMN1-207ENST00000510679 CCDC152Q4G0S7 254 aa13.35□□□□□ -0.27
SMN1-207ENST00000510679 RTL5Q5HYW3 569 aaPredicted RBP13.35□□□□□ -0.27
SMN1-207ENST00000510679 POTEEQ6S8J3 1075 aa13.35□□□□□ -0.27
SMN1-207ENST00000510679 G2E3Q7L622 706 aa13.35□□□□□ -0.27
SMN1-207ENST00000510679 SP8Q8IXZ3 490 aa13.35□□□□□ -0.27
SMN1-207ENST00000510679 SYNE4Q8N205 404 aa13.35□□□□□ -0.27
SMN1-207ENST00000510679 NEURL1BA8MQ27 555 aa13.34□□□□□ -0.27
SMN1-207ENST00000510679 ARHGAP33O14559 1287 aa13.34□□□□□ -0.27
SMN1-207ENST00000510679 CT47B1P0C2W7 299 aaPredicted RBP13.34□□□□□ -0.27
SMN1-207ENST00000510679 SLFN5Q08AF3 891 aa13.34□□□□□ -0.27
SMN1-207ENST00000510679 LINS1Q8NG48 757 aa13.34□□□□□ -0.27
SMN1-207ENST00000510679 NMRK2Q9NPI5 230 aa13.34□□□□□ -0.27
SMN1-207ENST00000510679 ZNF277Q9NRM2 450 aaPredicted RBP13.34□□□□□ -0.27
SMN1-207ENST00000510679 IGKV5-2P06315 115 aa13.33□□□□□ -0.28
SMN1-207ENST00000510679 VEGFAP15692 232 aaPredicted RBP13.33□□□□□ -0.28
SMN1-207ENST00000510679 OLFM4Q6UX06 510 aa13.33□□□□□ -0.28
SMN1-207ENST00000510679 DPP8Q6V1X1 898 aaPredicted RBP13.33□□□□□ -0.28
SMN1-207ENST00000510679 MPNDQ8N594 471 aa13.33□□□□□ -0.28
SMN1-207ENST00000510679 GCKRQ14397 625 aa13.32□□□□□ -0.28
SMN1-207ENST00000510679 CWF19L2Q2TBE0 894 aaKnown RBP13.32□□□□□ -0.28
SMN1-207ENST00000510679 LARGE2Q8N3Y3 721 aa13.32□□□□□ -0.28
SMN1-207ENST00000510679 RRAGCQ9HB90 399 aa13.32□□□□□ -0.28
SMN1-207ENST00000510679 FER1L6Q2WGJ9 1857 aa13.31□□□□□ -0.28
SMN1-207ENST00000510679 SNED1Q8TER0 1413 aa13.31□□□□□ -0.28
SMN1-207ENST00000510679 IQCA1LA6NCM1 817 aa13.31□□□□□ -0.28
SMN1-207ENST00000510679 EIF6P56537 245 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms