RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 HSP90B1P14625 803 aaKnown RBP13.48□□□□□ -0.25
MBD4-208ENST00000509828 TTLL12Q14166 644 aaPredicted RBP13.48□□□□□ -0.25
MBD4-208ENST00000509828 SF3B3Q15393 1217 aaKnown RBP13.48□□□□□ -0.25
MBD4-208ENST00000509828 HDGFL1Q5TGJ6 251 aa13.48□□□□□ -0.25
MBD4-208ENST00000509828 TBC1D16Q8TBP0 767 aa13.48□□□□□ -0.25
MBD4-208ENST00000509828 CDCA5Q96FF9 252 aa13.48□□□□□ -0.25
MBD4-208ENST00000509828 CSRNP1Q96S65 589 aa13.48□□□□□ -0.25
MBD4-208ENST00000509828 CHPF2Q9P2E5 772 aa13.48□□□□□ -0.25
MBD4-208ENST00000509828 IRS4O14654 1257 aaPredicted RBP13.47□□□□□ -0.25
MBD4-208ENST00000509828 UFL1O94874 794 aa13.47□□□□□ -0.25
MBD4-208ENST00000509828 SLC10A3P09131 477 aa13.47□□□□□ -0.25
MBD4-208ENST00000509828 TMPOP42166 694 aaKnown RBP13.47□□□□□ -0.25
MBD4-208ENST00000509828 SCARF1Q14162 830 aa13.47□□□□□ -0.25
MBD4-208ENST00000509828 GGA1Q9UJY5 639 aa13.47□□□□□ -0.25
MBD4-208ENST00000509828 ANGEL2Q5VTE6 544 aaKnown RBP13.46□□□□□ -0.25
MBD4-208ENST00000509828 RIC3Q7Z5B4 369 aa13.46□□□□□ -0.25
MBD4-208ENST00000509828 DBF4Q9UBU7 674 aaPredicted RBP13.46□□□□□ -0.25
MBD4-208ENST00000509828 VIL1P09327 827 aaKnown RBP13.45□□□□□ -0.26
MBD4-208ENST00000509828 KRT24Q2M2I5 525 aa13.45□□□□□ -0.26
MBD4-208ENST00000509828 ISCA1Q9BUE6 129 aa13.45□□□□□ -0.26
MBD4-208ENST00000509828 HYPKQ9NX55 129 aa13.45□□□□□ -0.26
MBD4-208ENST00000509828 DLG5Q8TDM6 1919 aa13.45□□□□□ -0.26
MBD4-208ENST00000509828 ASTN2O75129 1339 aaPredicted RBP13.44□□□□□ -0.26
MBD4-208ENST00000509828 USP17L8P0C7I0 530 aa13.44□□□□□ -0.26
MBD4-208ENST00000509828 FKBP1BP68106 108 aa13.44□□□□□ -0.26
MBD4-208ENST00000509828 GOLGA2Q08379 1002 aa13.44□□□□□ -0.26
MBD4-208ENST00000509828 PKN2Q16513 984 aaKnown RBP13.44□□□□□ -0.26
MBD4-208ENST00000509828 CCDC146Q8IYE0 955 aa13.44□□□□□ -0.26
MBD4-208ENST00000509828 AGBL3Q8NEM8 1001 aa13.44□□□□□ -0.26
MBD4-208ENST00000509828 FBXW7Q969H0 707 aa13.44□□□□□ -0.26
MBD4-208ENST00000509828 RTL9Q8NET4 1388 aa13.44□□□□□ -0.26
MBD4-208ENST00000509828 UBE2Q2LH0YL09 131 aa13.43□□□□□ -0.26
MBD4-208ENST00000509828 CHL1O00533 1208 aa13.43□□□□□ -0.26
MBD4-208ENST00000509828 NF2P35240 595 aa13.43□□□□□ -0.26
MBD4-208ENST00000509828 CCDC152Q4G0S7 254 aa13.43□□□□□ -0.26
MBD4-208ENST00000509828 PRPF38BQ5VTL8 546 aaKnown RBP13.43□□□□□ -0.26
MBD4-208ENST00000509828 RSBN1LQ6PCB5 846 aaPredicted RBP13.43□□□□□ -0.26
MBD4-208ENST00000509828 RASAL3Q86YV0 1011 aa13.43□□□□□ -0.26
MBD4-208ENST00000509828 CCDC85AQ96PX6 553 aaPredicted RBP13.43□□□□□ -0.26
MBD4-208ENST00000509828 SEC31BQ9NQW1 1179 aa13.43□□□□□ -0.26
MBD4-208ENST00000509828 TBC1D8O95759 1140 aa13.42□□□□□ -0.26
MBD4-208ENST00000509828 WDR43Q15061 677 aaKnown RBP eCLIP13.42□□□□□ -0.26
MBD4-208ENST00000509828 OGFOD1Q8N543 542 aa13.42□□□□□ -0.26
MBD4-208ENST00000509828 MYOZ2Q9NPC6 264 aa13.42□□□□□ -0.26
MBD4-208ENST00000509828 PODXL2Q9NZ53 605 aa13.42□□□□□ -0.26
MBD4-208ENST00000509828 HPS5Q9UPZ3 1129 aa13.42□□□□□ -0.26
MBD4-208ENST00000509828 ANKRD36CQ5JPF3 1778 aa13.41□□□□□ -0.26
MBD4-208ENST00000509828 USP17L3A6NCW0 530 aa13.41□□□□□ -0.26
MBD4-208ENST00000509828 USP17L4A6NCW7 530 aa13.41□□□□□ -0.26
MBD4-208ENST00000509828 HOXB7P09629 217 aa13.41□□□□□ -0.26
MBD4-208ENST00000509828 ZNF280AP59817 542 aaPredicted RBP13.41□□□□□ -0.26
MBD4-208ENST00000509828 MKRN3Q13064 507 aaKnown RBP13.41□□□□□ -0.26
MBD4-208ENST00000509828 USP17L1Q7RTZ2 530 aa13.41□□□□□ -0.26
MBD4-208ENST00000509828 ANKRD18AQ8IVF6 992 aa13.41□□□□□ -0.26
MBD4-208ENST00000509828 ZBTB38Q8NAP3 1195 aaPredicted RBP13.41□□□□□ -0.26
MBD4-208ENST00000509828 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.41□□□□□ -0.26
MBD4-208ENST00000509828 DUOX1Q9NRD9 1551 aa13.41□□□□□ -0.26
MBD4-208ENST00000509828 ATP2B4P23634 1241 aa13.4□□□□□ -0.26
MBD4-208ENST00000509828 TRIM28Q13263 835 aaKnown RBP13.4□□□□□ -0.26
MBD4-208ENST00000509828 RALBP1Q15311 655 aa13.4□□□□□ -0.26
MBD4-208ENST00000509828 PRAMEF18Q5VWM3 479 aa13.4□□□□□ -0.26
MBD4-208ENST00000509828 DUSP27Q5VZP5 1158 aa13.4□□□□□ -0.26
MBD4-208ENST00000509828 MOB2Q70IA6 237 aa13.4□□□□□ -0.26
MBD4-208ENST00000509828 ZNF296Q8WUU4 475 aaPredicted RBP13.4□□□□□ -0.26
MBD4-208ENST00000509828 MYD88Q99836 296 aa13.4□□□□□ -0.26
MBD4-208ENST00000509828 SCAF8Q9UPN6 1271 aaKnown RBP13.4□□□□□ -0.26
MBD4-208ENST00000509828 LAMB2P55268 1798 aa13.4□□□□□ -0.26
MBD4-208ENST00000509828 XDHP47989 1333 aa13.39□□□□□ -0.27
MBD4-208ENST00000509828 PDE8AO60658 829 aa13.39□□□□□ -0.27
MBD4-208ENST00000509828 PODNQ7Z5L7 613 aa13.39□□□□□ -0.27
MBD4-208ENST00000509828 JARID2Q92833 1246 aaPredicted RBP13.39□□□□□ -0.27
MBD4-208ENST00000509828 RUNDC1Q96C34 613 aa13.39□□□□□ -0.27
MBD4-208ENST00000509828 TAF1P21675 1872 aa13.39□□□□□ -0.27
MBD4-208ENST00000509828 PITPNM2Q9BZ72 1349 aa13.39□□□□□ -0.27
MBD4-208ENST00000509828 DDX58O95786 925 aaKnown RBP13.38□□□□□ -0.27
MBD4-208ENST00000509828 SREBF2Q12772 1141 aa13.38□□□□□ -0.27
MBD4-208ENST00000509828 PRKG1Q13976 671 aa13.38□□□□□ -0.27
MBD4-208ENST00000509828 ARMC9Q7Z3E5 817 aa13.38□□□□□ -0.27
MBD4-208ENST00000509828 CDC5LQ99459 802 aaKnown RBP13.38□□□□□ -0.27
MBD4-208ENST00000509828 CWC25Q9NXE8 425 aaPredicted RBP13.38□□□□□ -0.27
MBD4-208ENST00000509828 GPR25O00155 361 aa13.37□□□□□ -0.27
MBD4-208ENST00000509828 ELL2O00472 640 aaPredicted RBP13.37□□□□□ -0.27
MBD4-208ENST00000509828 FKTNO75072 461 aa13.37□□□□□ -0.27
MBD4-208ENST00000509828 PCCAP05165 728 aaPredicted RBP13.37□□□□□ -0.27
MBD4-208ENST00000509828 CCDC191Q8NCU4 936 aa13.37□□□□□ -0.27
MBD4-208ENST00000509828 NBPF9Q3BBW0 867 aa13.36□□□□□ -0.27
MBD4-208ENST00000509828 FBXO46Q6PJ61 603 aaPredicted RBP13.36□□□□□ -0.27
MBD4-208ENST00000509828 CHMP4AQ9BY43 222 aa13.36□□□□□ -0.27
MBD4-208ENST00000509828 PHAXQ9H814 394 aaKnown RBP13.36□□□□□ -0.27
MBD4-208ENST00000509828 TRIM35Q9UPQ4 493 aa13.36□□□□□ -0.27
MBD4-208ENST00000509828 AKAP11Q9UKA4 1901 aa13.35□□□□□ -0.27
MBD4-208ENST00000509828 POLR2AP24928 1970 aaKnown RBP13.35□□□□□ -0.27
MBD4-208ENST00000509828 TM4SF4P48230 202 aa13.35□□□□□ -0.27
MBD4-208ENST00000509828 GCC1Q96CN9 775 aa13.35□□□□□ -0.27
MBD4-208ENST00000509828 GMLQ99445 158 aa13.35□□□□□ -0.27
MBD4-208ENST00000509828 MBIPQ9NS73 344 aa13.35□□□□□ -0.27
MBD4-208ENST00000509828 LRRC37AA6NMS7 1700 aa13.35□□□□□ -0.27
MBD4-208ENST00000509828 PDE4DIPQ5VU43 2346 aa13.35□□□□□ -0.27
MBD4-208ENST00000509828 CALD1Q05682 793 aaKnown RBP13.34□□□□□ -0.27
MBD4-208ENST00000509828 SLC10A4Q96EP9 437 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms