RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 LDHDQ86WU2 507 aa11.07□□□□□ -0.64
PDLIM5-213ENST00000509357 CDC5LQ99459 802 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-213ENST00000509357 RCAN3Q9UKA8 241 aa11.07□□□□□ -0.64
PDLIM5-213ENST00000509357 RAD17O75943 681 aa11.06□□□□□ -0.64
PDLIM5-213ENST00000509357 UFL1O94874 794 aa11.06□□□□□ -0.64
PDLIM5-213ENST00000509357 NBPF7P0C2Y1 421 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-213ENST00000509357 POTEIP0CG38 1075 aa11.06□□□□□ -0.64
PDLIM5-213ENST00000509357 POTEJP0CG39 1038 aa11.06□□□□□ -0.64
PDLIM5-213ENST00000509357 CXCL9Q07325 125 aa11.06□□□□□ -0.64
PDLIM5-213ENST00000509357 TNIP1Q15025 636 aa11.06□□□□□ -0.64
PDLIM5-213ENST00000509357 CIAPIN1Q6FI81 312 aa11.06□□□□□ -0.64
PDLIM5-213ENST00000509357 ZC3H12CQ9C0D7 883 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-213ENST00000509357 GGA1Q9UJY5 639 aa11.06□□□□□ -0.64
PDLIM5-213ENST00000509357 DICER1Q9UPY3 1922 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 IGHMBP2P38935 993 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 DOK7Q18PE1 504 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 ATF7IPQ6VMQ6 1270 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 TMEM57Q8N5G2 664 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 TTLL11Q8NHH1 800 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 TBC1D16Q8TBP0 767 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 FRAT1Q92837 279 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 CLUAP1Q96AJ1 413 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 SUCLG2Q96I99 432 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 WDR90Q96KV7 1748 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 USP44Q9H0E7 712 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 GREM2Q9H772 168 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 DBNDD1Q9H9R9 158 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 DUOX1Q9NRD9 1551 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 POLLQ9UGP5 575 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 CHMP3Q9Y3E7 222 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 UTYO14607 1347 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 KIF16BQ96L93 1317 aa11.05□□□□□ -0.64
PDLIM5-213ENST00000509357 EPS15P42566 896 aa11.04□□□□□ -0.64
PDLIM5-213ENST00000509357 GMPSP49915 693 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-213ENST00000509357 FOXO4P98177 505 aa11.04□□□□□ -0.64
PDLIM5-213ENST00000509357 PANK1Q8TE04 598 aa11.04□□□□□ -0.64
PDLIM5-213ENST00000509357 ARHGAP45Q92619 1136 aa11.04□□□□□ -0.64
PDLIM5-213ENST00000509357 GPR101Q96P66 508 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-213ENST00000509357 MPHOSPH8Q99549 860 aa11.04□□□□□ -0.64
PDLIM5-213ENST00000509357 C9orf78Q9NZ63 289 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-213ENST00000509357 COL4A5P29400 1685 aa11.04□□□□□ -0.64
PDLIM5-213ENST00000509357 ECE2O60344 883 aa11.03□□□□□ -0.64
PDLIM5-213ENST00000509357 ALDH1L1O75891 902 aa11.03□□□□□ -0.64
PDLIM5-213ENST00000509357 ITGA6P23229 1130 aa11.03□□□□□ -0.64
PDLIM5-213ENST00000509357 ATP2B4P23634 1241 aa11.03□□□□□ -0.64
PDLIM5-213ENST00000509357 SCNN1DP51172 638 aa11.03□□□□□ -0.64
PDLIM5-213ENST00000509357 MAP1SQ66K74 1059 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-213ENST00000509357 INTS3Q68E01 1043 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-213ENST00000509357 MEIS3Q99687 375 aa11.03□□□□□ -0.64
PDLIM5-213ENST00000509357 SRCIN1Q9C0H9 1055 aa11.03□□□□□ -0.64
PDLIM5-213ENST00000509357 PODXL2Q9NZ53 605 aa11.03□□□□□ -0.64
PDLIM5-213ENST00000509357 XDHP47989 1333 aa11.03□□□□□ -0.64
PDLIM5-213ENST00000509357 ANKRD18BA2A2Z9 1011 aa11.02□□□□□ -0.65
PDLIM5-213ENST00000509357 H7C1D1 291 aa11.02□□□□□ -0.65
PDLIM5-213ENST00000509357 GRM8O00222 908 aa11.02□□□□□ -0.65
PDLIM5-213ENST00000509357 FAM161AQ3B820 660 aa11.02□□□□□ -0.65
PDLIM5-213ENST00000509357 TAF7LQ5H9L4 462 aa11.02□□□□□ -0.65
PDLIM5-213ENST00000509357 ZKSCAN2Q63HK3 967 aa11.02□□□□□ -0.65
PDLIM5-213ENST00000509357 USP50Q70EL3 339 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-213ENST00000509357 CNTROBQ8N137 903 aa11.02□□□□□ -0.65
PDLIM5-213ENST00000509357 ANKRD44Q8N8A2 993 aa11.02□□□□□ -0.65
PDLIM5-213ENST00000509357 PLA2G12BQ9BX93 195 aa11.02□□□□□ -0.65
PDLIM5-213ENST00000509357 ADARB2Q9NS39 739 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-213ENST00000509357 BSDC1Q9NW68 430 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-213ENST00000509357 GPRC5DQ9NZD1 345 aa11.02□□□□□ -0.65
PDLIM5-213ENST00000509357 ZNF646O15015 1829 aaPredicted RBP11.01□□□□□ -0.65
PDLIM5-213ENST00000509357 YDJCA8MPS7 323 aa11.01□□□□□ -0.65
PDLIM5-213ENST00000509357 PSMD14O00487 310 aa11.01□□□□□ -0.65
PDLIM5-213ENST00000509357 KCNJ4P48050 445 aa11.01□□□□□ -0.65
PDLIM5-213ENST00000509357 IFIT5Q13325 482 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-213ENST00000509357 DNAJC5GQ8N7S2 189 aa11.01□□□□□ -0.65
PDLIM5-213ENST00000509357 KLRG1Q96E93 195 aa11.01□□□□□ -0.65
PDLIM5-213ENST00000509357 API5Q9BZZ5 524 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-213ENST00000509357 CNOT7Q9UIV1 285 aaKnown RBP11.01□□□□□ -0.65
PDLIM5-213ENST00000509357 MINPP1Q9UNW1 487 aa11.01□□□□□ -0.65
PDLIM5-213ENST00000509357 ZBTB12Q9Y330 459 aaPredicted RBP11.01□□□□□ -0.65
PDLIM5-213ENST00000509357 WTIPA6NIX2 430 aaPredicted RBP11□□□□□ -0.65
PDLIM5-213ENST00000509357 CSF1RP07333 972 aa11□□□□□ -0.65
PDLIM5-213ENST00000509357 CCDC57Q2TAC2 916 aa11□□□□□ -0.65
PDLIM5-213ENST00000509357 LMBR1LQ6UX01 489 aa11□□□□□ -0.65
PDLIM5-213ENST00000509357 MICALL2Q8IY33 904 aa11□□□□□ -0.65
PDLIM5-213ENST00000509357 FBXW7Q969H0 707 aa11□□□□□ -0.65
PDLIM5-213ENST00000509357 ANKRD2Q9GZV1 360 aa11□□□□□ -0.65
PDLIM5-213ENST00000509357 RTL9Q8NET4 1388 aa11□□□□□ -0.65
PDLIM5-213ENST00000509357 CCT4P50991 539 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-213ENST00000509357 RBM26Q5T8P6 1007 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-213ENST00000509357 BICC1Q9H694 974 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-213ENST00000509357 KCNQ5Q9NR82 932 aa10.99□□□□□ -0.65
PDLIM5-213ENST00000509357 CREBZFQ9NS37 354 aa10.99□□□□□ -0.65
PDLIM5-213ENST00000509357 MKRN1Q9UHC7 482 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-213ENST00000509357 SCN4AP35499 1836 aa10.99□□□□□ -0.65
PDLIM5-213ENST00000509357 TMEM88BA6NKF7 163 aa10.98□□□□□ -0.65
PDLIM5-213ENST00000509357 ZBTB7BO15156 539 aaPredicted RBP10.98□□□□□ -0.65
PDLIM5-213ENST00000509357 ITGBL1O95965 494 aaPredicted RBP10.98□□□□□ -0.65
PDLIM5-213ENST00000509357 RPS12P25398 132 aaKnown RBP10.98□□□□□ -0.65
PDLIM5-213ENST00000509357 RRP1P56182 461 aaKnown RBP10.98□□□□□ -0.65
PDLIM5-213ENST00000509357 RABL6Q3YEC7 729 aaPredicted RBP10.98□□□□□ -0.65
PDLIM5-213ENST00000509357 DZIP1LQ8IYY4 767 aaKnown RBP10.98□□□□□ -0.65
PDLIM5-213ENST00000509357 DPF2Q92785 391 aa10.98□□□□□ -0.65
PDLIM5-213ENST00000509357 C1orf115Q9H7X2 142 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms