RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 NEXNQ0ZGT2 675 aa11.03□□□□□ -0.64
SNCA-211ENST00000508895 FSTL1Q12841 308 aa11.03□□□□□ -0.64
SNCA-211ENST00000508895 CCDC152Q4G0S7 254 aa11.03□□□□□ -0.64
SNCA-211ENST00000508895 TXNRD3Q86VQ6 643 aa11.03□□□□□ -0.64
SNCA-211ENST00000508895 NIM1KQ8IY84 436 aa11.03□□□□□ -0.64
SNCA-211ENST00000508895 C16orf71Q8IYS4 520 aaPredicted RBP11.03□□□□□ -0.64
SNCA-211ENST00000508895 SMC1BQ8NDV3 1235 aa11.03□□□□□ -0.64
SNCA-211ENST00000508895 JDP2Q8WYK2 163 aa11.03□□□□□ -0.64
SNCA-211ENST00000508895 YTHDC1Q96MU7 727 aaKnown RBP11.03□□□□□ -0.64
SNCA-211ENST00000508895 MINPP1Q9UNW1 487 aa11.03□□□□□ -0.64
SNCA-211ENST00000508895 ZBTB12Q9Y330 459 aaPredicted RBP11.03□□□□□ -0.64
SNCA-211ENST00000508895 C6orf229H3BNL8 230 aa11.02□□□□□ -0.65
SNCA-211ENST00000508895 ITGBL1O95965 494 aaPredicted RBP11.02□□□□□ -0.65
SNCA-211ENST00000508895 EGFRP00533 1210 aa11.02□□□□□ -0.65
SNCA-211ENST00000508895 CT47B1P0C2W7 299 aaPredicted RBP11.02□□□□□ -0.65
SNCA-211ENST00000508895 NBPF7P0C2Y1 421 aaPredicted RBP11.02□□□□□ -0.65
SNCA-211ENST00000508895 GMPSP49915 693 aaPredicted RBP11.02□□□□□ -0.65
SNCA-211ENST00000508895 HIRAP54198 1017 aaPredicted RBP11.02□□□□□ -0.65
SNCA-211ENST00000508895 EIF6P56537 245 aaKnown RBP11.02□□□□□ -0.65
SNCA-211ENST00000508895 EAPPQ56P03 285 aaPredicted RBP11.02□□□□□ -0.65
SNCA-211ENST00000508895 SLC4A10Q6U841 1118 aa11.02□□□□□ -0.65
SNCA-211ENST00000508895 DLK2Q6UY11 383 aa11.02□□□□□ -0.65
SNCA-211ENST00000508895 GPC2Q8N158 579 aa11.02□□□□□ -0.65
SNCA-211ENST00000508895 SUCLG2Q96I99 432 aa11.02□□□□□ -0.65
SNCA-211ENST00000508895 ZNF594Q96JF6 807 aaPredicted RBP11.02□□□□□ -0.65
SNCA-211ENST00000508895 CHMP4AQ9BY43 222 aa11.02□□□□□ -0.65
SNCA-211ENST00000508895 PODXL2Q9NZ53 605 aa11.02□□□□□ -0.65
SNCA-211ENST00000508895 HACL1Q9UJ83 578 aa11.02□□□□□ -0.65
SNCA-211ENST00000508895 ZNRF3Q9ULT6 936 aa11.02□□□□□ -0.65
SNCA-211ENST00000508895 PSMD14O00487 310 aa11.01□□□□□ -0.65
SNCA-211ENST00000508895 ITGA6P23229 1130 aa11.01□□□□□ -0.65
SNCA-211ENST00000508895 GRIPAP1Q4V328 841 aa11.01□□□□□ -0.65
SNCA-211ENST00000508895 MAP1SQ66K74 1059 aaPredicted RBP11.01□□□□□ -0.65
SNCA-211ENST00000508895 CHADLQ6NUI6 762 aa11.01□□□□□ -0.65
SNCA-211ENST00000508895 ANKRD18AQ8IVF6 992 aa11.01□□□□□ -0.65
SNCA-211ENST00000508895 TRPM4Q8TD43 1214 aa11.01□□□□□ -0.65
SNCA-211ENST00000508895 IRS2Q9Y4H2 1338 aa11.01□□□□□ -0.65
SNCA-211ENST00000508895 GRM8O00222 908 aa11□□□□□ -0.65
SNCA-211ENST00000508895 ECE2O60344 883 aa11□□□□□ -0.65
SNCA-211ENST00000508895 UFL1O94874 794 aa11□□□□□ -0.65
SNCA-211ENST00000508895 WASHC4Q2M389 1173 aa11□□□□□ -0.65
SNCA-211ENST00000508895 CIAPIN1Q6FI81 312 aa11□□□□□ -0.65
SNCA-211ENST00000508895 LMBR1LQ6UX01 489 aa11□□□□□ -0.65
SNCA-211ENST00000508895 TMC4Q7Z404 712 aa11□□□□□ -0.65
SNCA-211ENST00000508895 SUPT20HQ8NEM7 779 aa11□□□□□ -0.65
SNCA-211ENST00000508895 HELBQ8NG08 1087 aaPredicted RBP11□□□□□ -0.65
SNCA-211ENST00000508895 MXD3Q9BW11 206 aa11□□□□□ -0.65
SNCA-211ENST00000508895 BSDC1Q9NW68 430 aaPredicted RBP11□□□□□ -0.65
SNCA-211ENST00000508895 GPRC5DQ9NZD1 345 aa11□□□□□ -0.65
SNCA-211ENST00000508895 PASKQ96RG2 1323 aa11□□□□□ -0.65
SNCA-211ENST00000508895 ALDH1L2Q3SY69 923 aa10.99□□□□□ -0.65
SNCA-211ENST00000508895 ANKRD44Q8N8A2 993 aa10.99□□□□□ -0.65
SNCA-211ENST00000508895 PUS3Q9BZE2 481 aaKnown RBP10.99□□□□□ -0.65
SNCA-211ENST00000508895 SRCIN1Q9C0H9 1055 aa10.99□□□□□ -0.65
SNCA-211ENST00000508895 VPS33BQ9H267 617 aa10.99□□□□□ -0.65
SNCA-211ENST00000508895 SMC4Q9NTJ3 1288 aa10.99□□□□□ -0.65
SNCA-211ENST00000508895 ANKIB1Q9P2G1 1089 aa10.99□□□□□ -0.65
SNCA-211ENST00000508895 GGA1Q9UJY5 639 aa10.99□□□□□ -0.65
SNCA-211ENST00000508895 ASTN2O75129 1339 aaPredicted RBP10.99□□□□□ -0.65
SNCA-211ENST00000508895 TRPM7Q96QT4 1865 aa10.98□□□□□ -0.65
SNCA-211ENST00000508895 TRAF5O00463 557 aa10.98□□□□□ -0.65
SNCA-211ENST00000508895 TAF5LO75529 589 aa10.98□□□□□ -0.65
SNCA-211ENST00000508895 ALDH1L1O75891 902 aa10.98□□□□□ -0.65
SNCA-211ENST00000508895 RARSP54136 660 aaKnown RBP10.98□□□□□ -0.65
SNCA-211ENST00000508895 LDHDQ86WU2 507 aa10.98□□□□□ -0.65
SNCA-211ENST00000508895 USP44Q9H0E7 712 aa10.98□□□□□ -0.65
SNCA-211ENST00000508895 NOB1Q9ULX3 412 aaKnown RBP10.98□□□□□ -0.65
SNCA-211ENST00000508895 UTYO14607 1347 aa10.98□□□□□ -0.65
SNCA-211ENST00000508895 IQCA1LA6NCM1 817 aa10.97□□□□□ -0.65
SNCA-211ENST00000508895 BCAR3O75815 825 aa10.97□□□□□ -0.65
SNCA-211ENST00000508895 CCT4P50991 539 aaKnown RBP10.97□□□□□ -0.65
SNCA-211ENST00000508895 CHRNDQ07001 517 aa10.97□□□□□ -0.65
SNCA-211ENST00000508895 SAMD7Q7Z3H4 446 aa10.97□□□□□ -0.65
SNCA-211ENST00000508895 KLHDC4Q8TBB5 520 aa10.97□□□□□ -0.65
SNCA-211ENST00000508895 CDC5LQ99459 802 aaKnown RBP10.97□□□□□ -0.65
SNCA-211ENST00000508895 TMX4Q9H1E5 349 aaPredicted RBP10.97□□□□□ -0.65
SNCA-211ENST00000508895 BICC1Q9H694 974 aaKnown RBP10.97□□□□□ -0.65
SNCA-211ENST00000508895 CLEC11AQ9Y240 323 aa10.97□□□□□ -0.65
SNCA-211ENST00000508895 XDHP47989 1333 aa10.97□□□□□ -0.65
SNCA-211ENST00000508895 PTPRCP08575 1304 aa10.96□□□□□ -0.65
SNCA-211ENST00000508895 KIF16BQ96L93 1317 aa10.96□□□□□ -0.65
SNCA-211ENST00000508895 ATP2B4P23634 1241 aa10.96□□□□□ -0.65
SNCA-211ENST00000508895 BRPF1P55201 1214 aaPredicted RBP10.96□□□□□ -0.65
SNCA-211ENST00000508895 MICALL2Q8IY33 904 aa10.96□□□□□ -0.65
SNCA-211ENST00000508895 CNTROBQ8N137 903 aa10.96□□□□□ -0.65
SNCA-211ENST00000508895 GMLQ99445 158 aa10.96□□□□□ -0.65
SNCA-211ENST00000508895 C9orf78Q9NZ63 289 aaPredicted RBP10.96□□□□□ -0.65
SNCA-211ENST00000508895 CNOT7Q9UIV1 285 aaKnown RBP10.96□□□□□ -0.65
SNCA-211ENST00000508895 CHMP3Q9Y3E7 222 aa10.96□□□□□ -0.65
SNCA-211ENST00000508895 MYH13Q9UKX3 1938 aa10.96□□□□□ -0.66
SNCA-211ENST00000508895 ANKRD18BA2A2Z9 1011 aa10.95□□□□□ -0.66
SNCA-211ENST00000508895 VIL1P09327 827 aaKnown RBP10.95□□□□□ -0.66
SNCA-211ENST00000508895 HSPA1AP0DMV8 641 aaKnown RBP10.95□□□□□ -0.66
SNCA-211ENST00000508895 HSPA1BP0DMV9 641 aaKnown RBP10.95□□□□□ -0.66
SNCA-211ENST00000508895 RABL6Q3YEC7 729 aaPredicted RBP10.95□□□□□ -0.66
SNCA-211ENST00000508895 TBC1D10BQ4KMP7 808 aaPredicted RBP10.95□□□□□ -0.66
SNCA-211ENST00000508895 LRRC24Q50LG9 513 aa10.95□□□□□ -0.66
SNCA-211ENST00000508895 CST9Q5W186 159 aa10.95□□□□□ -0.66
SNCA-211ENST00000508895 GLIS2Q9BZE0 524 aaPredicted RBP10.95□□□□□ -0.66
SNCA-211ENST00000508895 ZC3H12CQ9C0D7 883 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms