RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 ANKRD18AQ8IVF6 992 aa12.94□□□□□ -0.34
PTPN20-220ENST00000508715 SSH3Q8TE77 659 aa12.94□□□□□ -0.34
PTPN20-220ENST00000508715 CDC5LQ99459 802 aaKnown RBP12.94□□□□□ -0.34
PTPN20-220ENST00000508715 MINPP1Q9UNW1 487 aa12.94□□□□□ -0.34
PTPN20-220ENST00000508715 RIPOR2Q9Y4F9 1068 aa12.94□□□□□ -0.34
PTPN20-220ENST00000508715 PCDHB15Q9Y5E8 787 aa12.94□□□□□ -0.34
PTPN20-220ENST00000508715 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.94□□□□□ -0.34
PTPN20-220ENST00000508715 SCN9AQ15858 1988 aa12.93□□□□□ -0.34
PTPN20-220ENST00000508715 SNAP23O00161 211 aa12.93□□□□□ -0.34
PTPN20-220ENST00000508715 SRGAP3O43295 1099 aa12.93□□□□□ -0.34
PTPN20-220ENST00000508715 COPRSQ9NQ92 184 aa12.93□□□□□ -0.34
PTPN20-220ENST00000508715 CCDC93Q567U6 631 aa12.92□□□□□ -0.34
PTPN20-220ENST00000508715 TMC4Q7Z404 712 aa12.92□□□□□ -0.34
PTPN20-220ENST00000508715 VGLL2Q8N8G2 317 aa12.92□□□□□ -0.34
PTPN20-220ENST00000508715 GPR101Q96P66 508 aaPredicted RBP12.92□□□□□ -0.34
PTPN20-220ENST00000508715 POLLQ9UGP5 575 aa12.92□□□□□ -0.34
PTPN20-220ENST00000508715 ZNF646O15015 1829 aaPredicted RBP12.92□□□□□ -0.34
PTPN20-220ENST00000508715 IRS2Q9Y4H2 1338 aa12.91□□□□□ -0.34
PTPN20-220ENST00000508715 EYA2O00167 538 aa12.91□□□□□ -0.34
PTPN20-220ENST00000508715 IGHMBP2P38935 993 aaKnown RBP12.91□□□□□ -0.34
PTPN20-220ENST00000508715 CHRNDQ07001 517 aa12.91□□□□□ -0.34
PTPN20-220ENST00000508715 CC2D2BQ6DHV5 1058 aa12.91□□□□□ -0.34
PTPN20-220ENST00000508715 LDHAL6AQ6ZMR3 332 aa12.91□□□□□ -0.34
PTPN20-220ENST00000508715 ARHGAP27Q6ZUM4 889 aa12.91□□□□□ -0.34
PTPN20-220ENST00000508715 HELBQ8NG08 1087 aaPredicted RBP12.91□□□□□ -0.34
PTPN20-220ENST00000508715 RTFDC1Q9BY42 306 aaPredicted RBP12.91□□□□□ -0.34
PTPN20-220ENST00000508715 PODXL2Q9NZ53 605 aa12.91□□□□□ -0.34
PTPN20-220ENST00000508715 HDAC5Q9UQL6 1122 aa12.91□□□□□ -0.34
PTPN20-220ENST00000508715 LTBP3Q9NS15 1303 aa12.9□□□□□ -0.34
PTPN20-220ENST00000508715 TAF5LO75529 589 aa12.9□□□□□ -0.34
PTPN20-220ENST00000508715 MPNDQ8N594 471 aa12.9□□□□□ -0.34
PTPN20-220ENST00000508715 PSMD1Q99460 953 aa12.9□□□□□ -0.34
PTPN20-220ENST00000508715 MPHOSPH8Q99549 860 aa12.9□□□□□ -0.34
PTPN20-220ENST00000508715 SIL1Q9H173 461 aa12.9□□□□□ -0.34
PTPN20-220ENST00000508715 NSFL1CQ9UNZ2 370 aaKnown RBP12.9□□□□□ -0.34
PTPN20-220ENST00000508715 TIAM2Q8IVF5 1701 aa12.9□□□□□ -0.34
PTPN20-220ENST00000508715 GRIN3BO60391 1043 aa12.89□□□□□ -0.35
PTPN20-220ENST00000508715 KLRK1P26718 216 aa12.89□□□□□ -0.35
PTPN20-220ENST00000508715 FKBP4Q02790 459 aaKnown RBP eCLIP12.89□□□□□ -0.35
PTPN20-220ENST00000508715 SOGA3Q5TF21 947 aa12.89□□□□□ -0.35
PTPN20-220ENST00000508715 TXNRD3Q86VQ6 643 aa12.89□□□□□ -0.35
PTPN20-220ENST00000508715 RPAP2Q8IXW5 612 aaPredicted RBP12.89□□□□□ -0.35
PTPN20-220ENST00000508715 RTKN2Q8IZC4 609 aa12.89□□□□□ -0.35
PTPN20-220ENST00000508715 TBC1D16Q8TBP0 767 aa12.89□□□□□ -0.35
PTPN20-220ENST00000508715 CNNM1Q9NRU3 951 aa12.89□□□□□ -0.35
PTPN20-220ENST00000508715 NOP58Q9Y2X3 529 aaKnown RBP12.89□□□□□ -0.35
PTPN20-220ENST00000508715 PSME4Q14997 1843 aa12.89□□□□□ -0.35
PTPN20-220ENST00000508715 XDHP47989 1333 aa12.88□□□□□ -0.35
PTPN20-220ENST00000508715 ARAP2Q8WZ64 1704 aa12.88□□□□□ -0.35
PTPN20-220ENST00000508715 CIAO1O76071 339 aa12.88□□□□□ -0.35
PTPN20-220ENST00000508715 SASH1O94885 1247 aa12.88□□□□□ -0.35
PTPN20-220ENST00000508715 CENPBP07199 599 aaPredicted RBP12.88□□□□□ -0.35
PTPN20-220ENST00000508715 TAF7LQ5H9L4 462 aa12.88□□□□□ -0.35
PTPN20-220ENST00000508715 DPP8Q6V1X1 898 aaPredicted RBP12.88□□□□□ -0.35
PTPN20-220ENST00000508715 TAOK3Q9H2K8 898 aa12.88□□□□□ -0.35
PTPN20-220ENST00000508715 ZNF277Q9NRM2 450 aaPredicted RBP12.88□□□□□ -0.35
PTPN20-220ENST00000508715 FGFR2P21802 821 aa12.87□□□□□ -0.35
PTPN20-220ENST00000508715 CHMP4BQ9H444 224 aaKnown RBP12.87□□□□□ -0.35
PTPN20-220ENST00000508715 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
PTPN20-220ENST00000508715 UFL1O94874 794 aa12.86□□□□□ -0.35
PTPN20-220ENST00000508715 GRIPAP1Q4V328 841 aa12.86□□□□□ -0.35
PTPN20-220ENST00000508715 ANKIB1Q9P2G1 1089 aa12.86□□□□□ -0.35
PTPN20-220ENST00000508715 EXOC6BQ9Y2D4 811 aa12.86□□□□□ -0.35
PTPN20-220ENST00000508715 MROH5Q6ZUA9 1318 aa12.86□□□□□ -0.35
PTPN20-220ENST00000508715 SURF6O75683 361 aaKnown RBP12.85□□□□□ -0.35
PTPN20-220ENST00000508715 PDE8BO95263 885 aa12.85□□□□□ -0.35
PTPN20-220ENST00000508715 ATP2B4P23634 1241 aa12.85□□□□□ -0.35
PTPN20-220ENST00000508715 IL15P40933 162 aaPredicted RBP12.85□□□□□ -0.35
PTPN20-220ENST00000508715 IARSP41252 1262 aaKnown RBP12.85□□□□□ -0.35
PTPN20-220ENST00000508715 KIAA2012Q0VF49 1180 aa12.85□□□□□ -0.35
PTPN20-220ENST00000508715 TFCP2Q12800 502 aa12.85□□□□□ -0.35
PTPN20-220ENST00000508715 AOC3Q16853 763 aa12.85□□□□□ -0.35
PTPN20-220ENST00000508715 METTL24Q5JXM2 366 aa12.85□□□□□ -0.35
PTPN20-220ENST00000508715 C9orf131Q5VYM1 1079 aa12.85□□□□□ -0.35
PTPN20-220ENST00000508715 ANKRD2Q9GZV1 360 aa12.85□□□□□ -0.35
PTPN20-220ENST00000508715 GGA1Q9UJY5 639 aa12.85□□□□□ -0.35
PTPN20-220ENST00000508715 LEMD3Q9Y2U8 911 aa12.85□□□□□ -0.35
PTPN20-220ENST00000508715 AKAP11Q9UKA4 1901 aa12.85□□□□□ -0.35
PTPN20-220ENST00000508715 MYH13Q9UKX3 1938 aa12.85□□□□□ -0.35
PTPN20-220ENST00000508715 ZNF804BA4D1E1 1349 aa12.85□□□□□ -0.35
PTPN20-220ENST00000508715 YDJCA8MPS7 323 aa12.84□□□□□ -0.35
PTPN20-220ENST00000508715 C6orf229H3BNL8 230 aa12.84□□□□□ -0.35
PTPN20-220ENST00000508715 RIMBP2O15034 1052 aa12.84□□□□□ -0.35
PTPN20-220ENST00000508715 IGHDP01880 384 aa12.84□□□□□ -0.35
PTPN20-220ENST00000508715 LMNB1P20700 586 aa12.84□□□□□ -0.35
PTPN20-220ENST00000508715 C15orf52Q6ZUT6 534 aaKnown RBP12.84□□□□□ -0.35
PTPN20-220ENST00000508715 MED23Q9ULK4 1368 aa12.83□□□□□ -0.36
PTPN20-220ENST00000508715 MYO5AQ9Y4I1 1855 aaKnown RBP12.83□□□□□ -0.36
PTPN20-220ENST00000508715 PPIP5K2O43314 1243 aa12.83□□□□□ -0.36
PTPN20-220ENST00000508715 UBE4AQ14139 1066 aa12.83□□□□□ -0.36
PTPN20-220ENST00000508715 WASHC4Q2M389 1173 aa12.83□□□□□ -0.36
PTPN20-220ENST00000508715 DCTPP1Q9H773 170 aa12.83□□□□□ -0.36
PTPN20-220ENST00000508715 KCNQ5Q9NR82 932 aa12.83□□□□□ -0.36
PTPN20-220ENST00000508715 RNF181Q9P0P0 153 aa12.83□□□□□ -0.36
PTPN20-220ENST00000508715 ZNF609O15014 1411 aa12.82□□□□□ -0.36
PTPN20-220ENST00000508715 FZD9O00144 591 aa12.82□□□□□ -0.36
PTPN20-220ENST00000508715 ADORA1P30542 326 aa12.82□□□□□ -0.36
PTPN20-220ENST00000508715 TIMM10P62072 90 aa12.82□□□□□ -0.36
PTPN20-220ENST00000508715 G3BP1Q13283 466 aaKnown RBP eCLIP12.82□□□□□ -0.36
PTPN20-220ENST00000508715 HDAC1Q13547 482 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms