RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ANKRD18BA2A2Z9 1011 aa25.11■■□□□ 1.61
SFXN1-209ENST00000508290 ATP2B4P23634 1241 aa25.11■■□□□ 1.61
SFXN1-209ENST00000508290 MPHOSPH8Q99549 860 aa25.11■■□□□ 1.61
SFXN1-209ENST00000508290 GJA3Q9Y6H8 435 aa25.11■■□□□ 1.61
SFXN1-209ENST00000508290 KIF16BQ96L93 1317 aa25.11■■□□□ 1.61
SFXN1-209ENST00000508290 COL4A1P02462 1669 aa25.1■■□□□ 1.61
SFXN1-209ENST00000508290 UFL1O94874 794 aa25.1■■□□□ 1.61
SFXN1-209ENST00000508290 IFIT5Q13325 482 aaKnown RBP25.1■■□□□ 1.61
SFXN1-209ENST00000508290 FAM161AQ3B820 660 aa25.1■■□□□ 1.61
SFXN1-209ENST00000508290 CIAPIN1Q6FI81 312 aa25.1■■□□□ 1.61
SFXN1-209ENST00000508290 LDHDQ86WU2 507 aa25.1■■□□□ 1.61
SFXN1-209ENST00000508290 BCL2L13Q9BXK5 485 aa25.1■■□□□ 1.61
SFXN1-209ENST00000508290 EPHX2P34913 555 aa25.09■■□□□ 1.61
SFXN1-209ENST00000508290 FOXO4P98177 505 aa25.09■■□□□ 1.61
SFXN1-209ENST00000508290 CXCL9Q07325 125 aa25.09■■□□□ 1.61
SFXN1-209ENST00000508290 API5Q9BZZ5 524 aaKnown RBP25.09■■□□□ 1.61
SFXN1-209ENST00000508290 ANKRD2Q9GZV1 360 aa25.09■■□□□ 1.61
SFXN1-209ENST00000508290 CHADLQ6NUI6 762 aa25.08■■□□□ 1.61
SFXN1-209ENST00000508290 MINPP1Q9UNW1 487 aa25.08■■□□□ 1.61
SFXN1-209ENST00000508290 CCT4P50991 539 aaKnown RBP25.07■■□□□ 1.6
SFXN1-209ENST00000508290 RARSP54136 660 aaKnown RBP25.07■■□□□ 1.6
SFXN1-209ENST00000508290 CCDC57Q2TAC2 916 aa25.07■■□□□ 1.6
SFXN1-209ENST00000508290 ARHGAP45Q92619 1136 aa25.07■■□□□ 1.6
SFXN1-209ENST00000508290 ZBED9Q6R2W3 1325 aa25.07■■□□□ 1.6
SFXN1-209ENST00000508290 G3V3G9 751 aa25.06■■□□□ 1.6
SFXN1-209ENST00000508290 DCAF8Q5TAQ9 597 aa25.06■■□□□ 1.6
SFXN1-209ENST00000508290 LMBR1LQ6UX01 489 aa25.06■■□□□ 1.6
SFXN1-209ENST00000508290 LEMD3Q9Y2U8 911 aa25.06■■□□□ 1.6
SFXN1-209ENST00000508290 RIMBP2O15034 1052 aa25.05■■□□□ 1.6
SFXN1-209ENST00000508290 SCNN1DP51172 638 aa25.05■■□□□ 1.6
SFXN1-209ENST00000508290 HDAC5Q9UQL6 1122 aa25.05■■□□□ 1.6
SFXN1-209ENST00000508290 MED23Q9ULK4 1368 aa25.05■■□□□ 1.6
SFXN1-209ENST00000508290 ECE2O60344 883 aa25.04■■□□□ 1.6
SFXN1-209ENST00000508290 USP50Q70EL3 339 aaPredicted RBP25.04■■□□□ 1.6
SFXN1-209ENST00000508290 GPRC5DQ9NZD1 345 aa25.04■■□□□ 1.6
SFXN1-209ENST00000508290 CHMP3Q9Y3E7 222 aa25.04■■□□□ 1.6
SFXN1-209ENST00000508290 IPO8O15397 1037 aaKnown RBP25.03■■□□□ 1.6
SFXN1-209ENST00000508290 NBPF7P0C2Y1 421 aaPredicted RBP25.03■■□□□ 1.6
SFXN1-209ENST00000508290 RPS12P25398 132 aaKnown RBP25.03■■□□□ 1.6
SFXN1-209ENST00000508290 NOB1Q9ULX3 412 aaKnown RBP25.03■■□□□ 1.6
SFXN1-209ENST00000508290 YDJCA8MPS7 323 aa25.02■■□□□ 1.6
SFXN1-209ENST00000508290 RAD17O75943 681 aa25.02■■□□□ 1.6
SFXN1-209ENST00000508290 EAPPQ56P03 285 aaPredicted RBP25.02■■□□□ 1.6
SFXN1-209ENST00000508290 TAF7LQ5H9L4 462 aa25.02■■□□□ 1.6
SFXN1-209ENST00000508290 PODNQ7Z5L7 613 aa25.02■■□□□ 1.6
SFXN1-209ENST00000508290 DPF2Q92785 391 aa25.02■■□□□ 1.6
SFXN1-209ENST00000508290 DBNDD1Q9H9R9 158 aa25.02■■□□□ 1.6
SFXN1-209ENST00000508290 ADARB2Q9NS39 739 aaKnown RBP25.02■■□□□ 1.6
SFXN1-209ENST00000508290 RABL6Q3YEC7 729 aaPredicted RBP25.01■■□□□ 1.59
SFXN1-209ENST00000508290 GMPSP49915 693 aaPredicted RBP25■■□□□ 1.59
SFXN1-209ENST00000508290 EPHA10Q5JZY3 1008 aa25■■□□□ 1.59
SFXN1-209ENST00000508290 SUCLG2Q96I99 432 aa25■■□□□ 1.59
SFXN1-209ENST00000508290 ZNF804BA4D1E1 1349 aa24.99■■□□□ 1.59
SFXN1-209ENST00000508290 ZNF609O15014 1411 aa24.99■■□□□ 1.59
SFXN1-209ENST00000508290 DOK7Q18PE1 504 aa24.99■■□□□ 1.59
SFXN1-209ENST00000508290 USP44Q9H0E7 712 aa24.99■■□□□ 1.59
SFXN1-209ENST00000508290 EPS15P42566 896 aa24.98■■□□□ 1.59
SFXN1-209ENST00000508290 KCNJ4P48050 445 aa24.98■■□□□ 1.59
SFXN1-209ENST00000508290 CHRNDQ07001 517 aa24.98■■□□□ 1.59
SFXN1-209ENST00000508290 LDHAL6AQ6ZMR3 332 aa24.98■■□□□ 1.59
SFXN1-209ENST00000508290 KAZALD1Q96I82 304 aa24.98■■□□□ 1.59
SFXN1-209ENST00000508290 CLEC11AQ9Y240 323 aa24.98■■□□□ 1.59
SFXN1-209ENST00000508290 ADAMTSL1Q8N6G6 1762 aa24.98■■□□□ 1.59
SFXN1-209ENST00000508290 H7C1D1 291 aa24.97■■□□□ 1.59
SFXN1-209ENST00000508290 PSMD14O00487 310 aa24.97■■□□□ 1.59
SFXN1-209ENST00000508290 POTEIP0CG38 1075 aa24.97■■□□□ 1.59
SFXN1-209ENST00000508290 POTEJP0CG39 1038 aa24.97■■□□□ 1.59
SFXN1-209ENST00000508290 GPR101Q96P66 508 aaPredicted RBP24.97■■□□□ 1.59
SFXN1-209ENST00000508290 COA1Q9GZY4 146 aa24.97■■□□□ 1.59
SFXN1-209ENST00000508290 CNNM1Q9NRU3 951 aa24.97■■□□□ 1.59
SFXN1-209ENST00000508290 BICC1Q9H694 974 aaKnown RBP24.96■■□□□ 1.59
SFXN1-209ENST00000508290 VIL1P09327 827 aaKnown RBP24.95■■□□□ 1.58
SFXN1-209ENST00000508290 UBTFL1P0CB47 393 aaPredicted RBP24.95■■□□□ 1.58
SFXN1-209ENST00000508290 C15orf52Q6ZUT6 534 aaKnown RBP24.95■■□□□ 1.58
SFXN1-209ENST00000508290 ZC3H15Q8WU90 426 aaKnown RBP24.95■■□□□ 1.58
SFXN1-209ENST00000508290 CNOT7Q9UIV1 285 aaKnown RBP24.95■■□□□ 1.58
SFXN1-209ENST00000508290 SPEF2Q9C093 1822 aa24.94■■□□□ 1.58
SFXN1-209ENST00000508290 INTS3Q68E01 1043 aaKnown RBP24.94■■□□□ 1.58
SFXN1-209ENST00000508290 AGBL3Q8NEM8 1001 aa24.94■■□□□ 1.58
SFXN1-209ENST00000508290 USP17L3A6NCW0 530 aa24.93■■□□□ 1.58
SFXN1-209ENST00000508290 USP17L4A6NCW7 530 aa24.93■■□□□ 1.58
SFXN1-209ENST00000508290 MMP14P50281 582 aa24.93■■□□□ 1.58
SFXN1-209ENST00000508290 ATF7IPQ6VMQ6 1270 aa24.93■■□□□ 1.58
SFXN1-209ENST00000508290 USP17L1Q7RTZ2 530 aa24.93■■□□□ 1.58
SFXN1-209ENST00000508290 ANKRD44Q8N8A2 993 aa24.93■■□□□ 1.58
SFXN1-209ENST00000508290 MROH5Q6ZUA9 1318 aa24.92■■□□□ 1.58
SFXN1-209ENST00000508290 MYO3BQ8WXR4 1341 aa24.92■■□□□ 1.58
SFXN1-209ENST00000508290 PASKQ96RG2 1323 aa24.92■■□□□ 1.58
SFXN1-209ENST00000508290 RSBN1LQ6PCB5 846 aaPredicted RBP24.92■■□□□ 1.58
SFXN1-209ENST00000508290 MICALL2Q8IY33 904 aa24.92■■□□□ 1.58
SFXN1-209ENST00000508290 CNTROBQ8N137 903 aa24.92■■□□□ 1.58
SFXN1-209ENST00000508290 ITGBL1O95965 494 aaPredicted RBP24.91■■□□□ 1.58
SFXN1-209ENST00000508290 CREBZFQ9NS37 354 aa24.91■■□□□ 1.58
SFXN1-209ENST00000508290 GNAI3P08754 354 aa24.9■■□□□ 1.58
SFXN1-209ENST00000508290 STRIP1Q5VSL9 837 aa24.9■■□□□ 1.58
SFXN1-209ENST00000508290 ZNF594Q96JF6 807 aaPredicted RBP24.9■■□□□ 1.58
SFXN1-209ENST00000508290 PGAP2Q9UHJ9 254 aa24.9■■□□□ 1.58
SFXN1-209ENST00000508290 ZBTB12Q9Y330 459 aaPredicted RBP24.9■■□□□ 1.58
SFXN1-209ENST00000508290 ZNF804AQ7Z570 1209 aa24.89■■□□□ 1.58
SFXN1-209ENST00000508290 BCAR3O75815 825 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms