RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 KIAA2012Q0VF49 1180 aa20.57■□□□□ 0.88
DDR1-261ENST00000507901 SUPT20HQ8NEM7 779 aa20.57■□□□□ 0.88
DDR1-261ENST00000507901 TBC1D16Q8TBP0 767 aa20.57■□□□□ 0.88
DDR1-261ENST00000507901 WDR90Q96KV7 1748 aa20.57■□□□□ 0.88
DDR1-261ENST00000507901 TMX4Q9H1E5 349 aaPredicted RBP20.57■□□□□ 0.88
DDR1-261ENST00000507901 NSFL1CQ9UNZ2 370 aaKnown RBP20.57■□□□□ 0.88
DDR1-261ENST00000507901 XDHP47989 1333 aa20.56■□□□□ 0.88
DDR1-261ENST00000507901 GNAI3P08754 354 aa20.56■□□□□ 0.88
DDR1-261ENST00000507901 ZNF594Q96JF6 807 aaPredicted RBP20.56■□□□□ 0.88
DDR1-261ENST00000507901 LRRFIP2Q9Y608 721 aaKnown RBP20.56■□□□□ 0.88
DDR1-261ENST00000507901 MTX1Q13505 466 aa20.55■□□□□ 0.88
DDR1-261ENST00000507901 AOC3Q16853 763 aa20.55■□□□□ 0.88
DDR1-261ENST00000507901 CCDC57Q2TAC2 916 aa20.55■□□□□ 0.88
DDR1-261ENST00000507901 GLTPD2A6NH11 291 aa20.54■□□□□ 0.88
DDR1-261ENST00000507901 WTIPA6NIX2 430 aaPredicted RBP20.54■□□□□ 0.88
DDR1-261ENST00000507901 ZBTB7BO15156 539 aaPredicted RBP20.54■□□□□ 0.88
DDR1-261ENST00000507901 FTSJ3Q8IY81 847 aaKnown RBP20.54■□□□□ 0.88
DDR1-261ENST00000507901 PANK1Q8TE04 598 aa20.54■□□□□ 0.88
DDR1-261ENST00000507901 MPHOSPH8Q99549 860 aa20.54■□□□□ 0.88
DDR1-261ENST00000507901 CHMP3Q9Y3E7 222 aa20.54■□□□□ 0.88
DDR1-261ENST00000507901 ZNF646O15015 1829 aaPredicted RBP20.54■□□□□ 0.88
DDR1-261ENST00000507901 SCN9AQ15858 1988 aa20.54■□□□□ 0.88
DDR1-261ENST00000507901 ZNF541Q9H0D2 1346 aa20.53■□□□□ 0.88
DDR1-261ENST00000507901 IRS2Q9Y4H2 1338 aa20.53■□□□□ 0.88
DDR1-261ENST00000507901 PSME4Q14997 1843 aa20.53■□□□□ 0.88
DDR1-261ENST00000507901 PPIP5K2O43314 1243 aa20.53■□□□□ 0.88
DDR1-261ENST00000507901 PLIN1O60240 522 aa20.53■□□□□ 0.88
DDR1-261ENST00000507901 CHRNDQ07001 517 aa20.53■□□□□ 0.88
DDR1-261ENST00000507901 C16orf71Q8IYS4 520 aaPredicted RBP20.53■□□□□ 0.88
DDR1-261ENST00000507901 GGA1Q9UJY5 639 aa20.53■□□□□ 0.88
DDR1-261ENST00000507901 RIPOR2Q9Y4F9 1068 aa20.53■□□□□ 0.88
DDR1-261ENST00000507901 HSPA6P17066 643 aa20.52■□□□□ 0.88
DDR1-261ENST00000507901 ATP2B4P23634 1241 aa20.52■□□□□ 0.88
DDR1-261ENST00000507901 DPY19L2Q6NUT2 758 aa20.52■□□□□ 0.88
DDR1-261ENST00000507901 LARGE2Q8N3Y3 721 aa20.52■□□□□ 0.88
DDR1-261ENST00000507901 PUS3Q9BZE2 481 aaKnown RBP20.52■□□□□ 0.88
DDR1-261ENST00000507901 RRAGCQ9HB90 399 aa20.52■□□□□ 0.88
DDR1-261ENST00000507901 ANKIB1Q9P2G1 1089 aa20.52■□□□□ 0.88
DDR1-261ENST00000507901 HDAC5Q9UQL6 1122 aa20.52■□□□□ 0.88
DDR1-261ENST00000507901 MED23Q9ULK4 1368 aa20.51■□□□□ 0.87
DDR1-261ENST00000507901 UFL1O94874 794 aa20.51■□□□□ 0.87
DDR1-261ENST00000507901 PTPN12Q05209 780 aaKnown RBP20.51■□□□□ 0.87
DDR1-261ENST00000507901 LDHAL6AQ6ZMR3 332 aa20.51■□□□□ 0.87
DDR1-261ENST00000507901 GPR101Q96P66 508 aaPredicted RBP20.51■□□□□ 0.87
DDR1-261ENST00000507901 ANKRD2Q9GZV1 360 aa20.51■□□□□ 0.87
DDR1-261ENST00000507901 YDJCA8MPS7 323 aa20.5■□□□□ 0.87
DDR1-261ENST00000507901 POTECB2RU33 542 aa20.5■□□□□ 0.87
DDR1-261ENST00000507901 C6orf229H3BNL8 230 aa20.5■□□□□ 0.87
DDR1-261ENST00000507901 MS4A1P11836 297 aa20.5■□□□□ 0.87
DDR1-261ENST00000507901 PDE3AQ14432 1141 aa20.5■□□□□ 0.87
DDR1-261ENST00000507901 WASHC4Q2M389 1173 aa20.5■□□□□ 0.87
DDR1-261ENST00000507901 ITPRIPQ8IWB1 547 aa20.5■□□□□ 0.87
DDR1-261ENST00000507901 KLHDC4Q8TBB5 520 aa20.5■□□□□ 0.87
DDR1-261ENST00000507901 RBM46Q8TBY0 533 aaKnown RBP20.5■□□□□ 0.87
DDR1-261ENST00000507901 JDP2Q8WYK2 163 aa20.5■□□□□ 0.87
DDR1-261ENST00000507901 EYA3Q99504 573 aa20.5■□□□□ 0.87
DDR1-261ENST00000507901 LEMD3Q9Y2U8 911 aa20.5■□□□□ 0.87
DDR1-261ENST00000507901 SCN4AP35499 1836 aa20.49■□□□□ 0.87
DDR1-261ENST00000507901 GNAI2P04899 355 aa20.49■□□□□ 0.87
DDR1-261ENST00000507901 C20orf194Q5TEA3 1177 aa20.49■□□□□ 0.87
DDR1-261ENST00000507901 NIM1KQ8IY84 436 aa20.49■□□□□ 0.87
DDR1-261ENST00000507901 VGLL2Q8N8G2 317 aa20.49■□□□□ 0.87
DDR1-261ENST00000507901 L3MBTL3Q96JM7 780 aaPredicted RBP20.49■□□□□ 0.87
DDR1-261ENST00000507901 VEGFAP15692 232 aaPredicted RBP20.48■□□□□ 0.87
DDR1-261ENST00000507901 MVPQ14764 893 aaKnown RBP20.48■□□□□ 0.87
DDR1-261ENST00000507901 LRRC24Q50LG9 513 aa20.48■□□□□ 0.87
DDR1-261ENST00000507901 C15orf52Q6ZUT6 534 aaKnown RBP20.48■□□□□ 0.87
DDR1-261ENST00000507901 ZNRF3Q9ULT6 936 aa20.48■□□□□ 0.87
DDR1-261ENST00000507901 DDNO94850 711 aaPredicted RBP20.47■□□□□ 0.87
DDR1-261ENST00000507901 KLRK1P26718 216 aa20.47■□□□□ 0.87
DDR1-261ENST00000507901 TAF7LQ5H9L4 462 aa20.47■□□□□ 0.87
DDR1-261ENST00000507901 ATG9AQ7Z3C6 839 aa20.47■□□□□ 0.87
DDR1-261ENST00000507901 TXNRD3Q86VQ6 643 aa20.47■□□□□ 0.87
DDR1-261ENST00000507901 COPRSQ9NQ92 184 aa20.47■□□□□ 0.87
DDR1-261ENST00000507901 ZNF804BA4D1E1 1349 aa20.47■□□□□ 0.87
DDR1-261ENST00000507901 SNAP23O00161 211 aa20.46■□□□□ 0.87
DDR1-261ENST00000507901 RIMBP2O15034 1052 aa20.46■□□□□ 0.87
DDR1-261ENST00000507901 TAF5LO75529 589 aa20.46■□□□□ 0.87
DDR1-261ENST00000507901 FSTL1Q12841 308 aa20.46■□□□□ 0.87
DDR1-261ENST00000507901 GPC2Q8N158 579 aa20.46■□□□□ 0.87
DDR1-261ENST00000507901 CNNM1Q9NRU3 951 aa20.46■□□□□ 0.87
DDR1-261ENST00000507901 FBXO3Q9UK99 471 aa20.46■□□□□ 0.87
DDR1-261ENST00000507901 MROH5Q6ZUA9 1318 aa20.46■□□□□ 0.87
DDR1-261ENST00000507901 EYA2O00167 538 aa20.45■□□□□ 0.86
DDR1-261ENST00000507901 CIAO1O76071 339 aa20.45■□□□□ 0.86
DDR1-261ENST00000507901 CXCL9Q07325 125 aa20.45■□□□□ 0.86
DDR1-261ENST00000507901 POLA2Q14181 598 aa20.45■□□□□ 0.86
DDR1-261ENST00000507901 HELBQ8NG08 1087 aaPredicted RBP20.45■□□□□ 0.86
DDR1-261ENST00000507901 ZC3H12CQ9C0D7 883 aaKnown RBP20.45■□□□□ 0.86
DDR1-261ENST00000507901 DBNDD1Q9H9R9 158 aa20.45■□□□□ 0.86
DDR1-261ENST00000507901 COG6Q9Y2V7 657 aa20.45■□□□□ 0.86
DDR1-261ENST00000507901 ZNF609O15014 1411 aa20.44■□□□□ 0.86
DDR1-261ENST00000507901 PNMA6EA0A0J9YXQ4 647 aa20.44■□□□□ 0.86
DDR1-261ENST00000507901 ECE2O60344 883 aa20.44■□□□□ 0.86
DDR1-261ENST00000507901 EIF6P56537 245 aaKnown RBP20.44■□□□□ 0.86
DDR1-261ENST00000507901 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.44■□□□□ 0.86
DDR1-261ENST00000507901 ZBTB40Q9NUA8 1239 aa20.44■□□□□ 0.86
DDR1-261ENST00000507901 DDX19BQ9UMR2 479 aa20.44■□□□□ 0.86
DDR1-261ENST00000507901 ADAMTSL1Q8N6G6 1762 aa20.44■□□□□ 0.86
DDR1-261ENST00000507901 SRGAP3O43295 1099 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms