RNA–Protein interactions for RNA: ENST00000507226.1

CCHCR1-221, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-221ENST00000507226 LRRC37AA6NMS7 1700 aa22.29■■□□□ 1.16
CCHCR1-221ENST00000507226 TAF1P21675 1872 aa22.29■■□□□ 1.16
CCHCR1-221ENST00000507226 KLHDC4Q8TBB5 520 aa22.29■■□□□ 1.16
CCHCR1-221ENST00000507226 TBC1D16Q8TBP0 767 aa22.29■■□□□ 1.16
CCHCR1-221ENST00000507226 PUS3Q9BZE2 481 aaKnown RBP22.29■■□□□ 1.16
CCHCR1-221ENST00000507226 XDHP47989 1333 aa22.29■■□□□ 1.16
CCHCR1-221ENST00000507226 CHRNDQ07001 517 aa22.28■■□□□ 1.16
CCHCR1-221ENST00000507226 MTX1Q13505 466 aa22.28■■□□□ 1.16
CCHCR1-221ENST00000507226 VPS33BQ9H267 617 aa22.28■■□□□ 1.16
CCHCR1-221ENST00000507226 C1orf115Q9H7X2 142 aa22.28■■□□□ 1.16
CCHCR1-221ENST00000507226 GGA1Q9UJY5 639 aa22.28■■□□□ 1.16
CCHCR1-221ENST00000507226 DDX19BQ9UMR2 479 aa22.28■■□□□ 1.16
CCHCR1-221ENST00000507226 DUOX1Q9NRD9 1551 aa22.28■■□□□ 1.16
CCHCR1-221ENST00000507226 FER1L6Q2WGJ9 1857 aa22.28■■□□□ 1.16
CCHCR1-221ENST00000507226 C6orf229H3BNL8 230 aa22.27■■□□□ 1.16
CCHCR1-221ENST00000507226 PPIP5K2O43314 1243 aa22.27■■□□□ 1.16
CCHCR1-221ENST00000507226 UFL1O94874 794 aa22.27■■□□□ 1.16
CCHCR1-221ENST00000507226 PTPN12Q05209 780 aaKnown RBP22.27■■□□□ 1.16
CCHCR1-221ENST00000507226 AOC3Q16853 763 aa22.27■■□□□ 1.16
CCHCR1-221ENST00000507226 ANKRD2Q9GZV1 360 aa22.27■■□□□ 1.16
CCHCR1-221ENST00000507226 CNNM1Q9NRU3 951 aa22.27■■□□□ 1.16
CCHCR1-221ENST00000507226 MYH3P11055 1940 aa22.26■■□□□ 1.15
CCHCR1-221ENST00000507226 WTIPA6NIX2 430 aaPredicted RBP22.26■■□□□ 1.15
CCHCR1-221ENST00000507226 ATP2B4P23634 1241 aa22.26■■□□□ 1.15
CCHCR1-221ENST00000507226 KIAA2012Q0VF49 1180 aa22.26■■□□□ 1.15
CCHCR1-221ENST00000507226 LARGE2Q8N3Y3 721 aa22.26■■□□□ 1.15
CCHCR1-221ENST00000507226 GPR101Q96P66 508 aaPredicted RBP22.26■■□□□ 1.15
CCHCR1-221ENST00000507226 RIPOR2Q9Y4F9 1068 aa22.26■■□□□ 1.15
CCHCR1-221ENST00000507226 LRRC24Q50LG9 513 aa22.25■■□□□ 1.15
CCHCR1-221ENST00000507226 HELBQ8NG08 1087 aaPredicted RBP22.25■■□□□ 1.15
CCHCR1-221ENST00000507226 ZC3H4Q9UPT8 1303 aaKnown RBP22.25■■□□□ 1.15
CCHCR1-221ENST00000507226 SRGAP3O43295 1099 aa22.24■■□□□ 1.15
CCHCR1-221ENST00000507226 WASHC4Q2M389 1173 aa22.24■■□□□ 1.15
CCHCR1-221ENST00000507226 EYA3Q99504 573 aa22.24■■□□□ 1.15
CCHCR1-221ENST00000507226 ZBTB40Q9NUA8 1239 aa22.24■■□□□ 1.15
CCHCR1-221ENST00000507226 UTRNP46939 3433 aa22.24■■□□□ 1.15
CCHCR1-221ENST00000507226 COL4A5P29400 1685 aa22.23■■□□□ 1.15
CCHCR1-221ENST00000507226 PNMA6EA0A0J9YXQ4 647 aa22.23■■□□□ 1.15
CCHCR1-221ENST00000507226 RIMBP2O15034 1052 aa22.23■■□□□ 1.15
CCHCR1-221ENST00000507226 TAF5LO75529 589 aa22.23■■□□□ 1.15
CCHCR1-221ENST00000507226 JDP2Q8WYK2 163 aa22.23■■□□□ 1.15
CCHCR1-221ENST00000507226 PA2G4Q9UQ80 394 aaKnown RBP22.23■■□□□ 1.15
CCHCR1-221ENST00000507226 LEMD3Q9Y2U8 911 aa22.23■■□□□ 1.15
CCHCR1-221ENST00000507226 EYA2O00167 538 aa22.22■■□□□ 1.15
CCHCR1-221ENST00000507226 ATP8B2P98198 1209 aa22.22■■□□□ 1.15
CCHCR1-221ENST00000507226 NIM1KQ8IY84 436 aa22.22■■□□□ 1.15
CCHCR1-221ENST00000507226 COPRSQ9NQ92 184 aa22.22■■□□□ 1.15
CCHCR1-221ENST00000507226 LTBP1Q14766 1721 aa22.22■■□□□ 1.15
CCHCR1-221ENST00000507226 FZD9O00144 591 aa22.21■■□□□ 1.15
CCHCR1-221ENST00000507226 SNAP23O00161 211 aa22.21■■□□□ 1.15
CCHCR1-221ENST00000507226 POLA2Q14181 598 aa22.21■■□□□ 1.15
CCHCR1-221ENST00000507226 CHMP4BQ9H444 224 aaKnown RBP22.21■■□□□ 1.15
CCHCR1-221ENST00000507226 ZNF804BA4D1E1 1349 aa22.21■■□□□ 1.15
CCHCR1-221ENST00000507226 MROH5Q6ZUA9 1318 aa22.21■■□□□ 1.15
CCHCR1-221ENST00000507226 CEP85Q6P2H3 762 aa22.2■■□□□ 1.14
CCHCR1-221ENST00000507226 ATG9AQ7Z3C6 839 aa22.2■■□□□ 1.14
CCHCR1-221ENST00000507226 ZC3H12CQ9C0D7 883 aaKnown RBP22.2■■□□□ 1.14
CCHCR1-221ENST00000507226 SIL1Q9H173 461 aa22.2■■□□□ 1.14
CCHCR1-221ENST00000507226 FBXO3Q9UK99 471 aa22.2■■□□□ 1.14
CCHCR1-221ENST00000507226 CIAO1O76071 339 aa22.19■■□□□ 1.14
CCHCR1-221ENST00000507226 KCNJ4P48050 445 aa22.19■■□□□ 1.14
CCHCR1-221ENST00000507226 METTL24Q5JXM2 366 aa22.19■■□□□ 1.14
CCHCR1-221ENST00000507226 ZNF784Q8NCA9 323 aaPredicted RBP22.19■■□□□ 1.14
CCHCR1-221ENST00000507226 ZNF541Q9H0D2 1346 aa22.19■■□□□ 1.14
CCHCR1-221ENST00000507226 MED23Q9ULK4 1368 aa22.19■■□□□ 1.14
CCHCR1-221ENST00000507226 KLRK1P26718 216 aa22.18■■□□□ 1.14
CCHCR1-221ENST00000507226 DOK7Q18PE1 504 aa22.18■■□□□ 1.14
CCHCR1-221ENST00000507226 VGLL2Q8N8G2 317 aa22.18■■□□□ 1.14
CCHCR1-221ENST00000507226 SSH3Q8TE77 659 aa22.18■■□□□ 1.14
CCHCR1-221ENST00000507226 ZNF526Q8TF50 670 aaPredicted RBP22.18■■□□□ 1.14
CCHCR1-221ENST00000507226 ZNRF3Q9ULT6 936 aa22.18■■□□□ 1.14
CCHCR1-221ENST00000507226 SUPT16HQ9Y5B9 1047 aaKnown RBP22.18■■□□□ 1.14
CCHCR1-221ENST00000507226 IRS2Q9Y4H2 1338 aa22.17■■□□□ 1.14
CCHCR1-221ENST00000507226 GLTPD2A6NH11 291 aa22.17■■□□□ 1.14
CCHCR1-221ENST00000507226 TXNRD3Q86VQ6 643 aa22.17■■□□□ 1.14
CCHCR1-221ENST00000507226 DBNDD1Q9H9R9 158 aa22.17■■□□□ 1.14
CCHCR1-221ENST00000507226 CHD4Q14839 1912 aa22.17■■□□□ 1.14
CCHCR1-221ENST00000507226 SBF1O95248 1867 aa22.17■■□□□ 1.14
CCHCR1-221ENST00000507226 YDJCA8MPS7 323 aa22.16■■□□□ 1.14
CCHCR1-221ENST00000507226 ECE2O60344 883 aa22.16■■□□□ 1.14
CCHCR1-221ENST00000507226 PDE8BO95263 885 aa22.16■■□□□ 1.14
CCHCR1-221ENST00000507226 IL15P40933 162 aaPredicted RBP22.16■■□□□ 1.14
CCHCR1-221ENST00000507226 EIF6P56537 245 aaKnown RBP22.16■■□□□ 1.14
CCHCR1-221ENST00000507226 UBE4AQ14139 1066 aa22.16■■□□□ 1.14
CCHCR1-221ENST00000507226 DPY19L2Q6NUT2 758 aa22.16■■□□□ 1.14
CCHCR1-221ENST00000507226 C15orf52Q6ZUT6 534 aaKnown RBP22.16■■□□□ 1.14
CCHCR1-221ENST00000507226 CRBNQ96SW2 442 aa22.16■■□□□ 1.14
CCHCR1-221ENST00000507226 SPEF2Q9C093 1822 aa22.15■■□□□ 1.14
CCHCR1-221ENST00000507226 DDNO94850 711 aaPredicted RBP22.14■■□□□ 1.13
CCHCR1-221ENST00000507226 CXCL9Q07325 125 aa22.14■■□□□ 1.13
CCHCR1-221ENST00000507226 RPAP2Q8IXW5 612 aaPredicted RBP22.14■■□□□ 1.13
CCHCR1-221ENST00000507226 KDM2BQ8NHM5 1336 aa22.13■■□□□ 1.13
CCHCR1-221ENST00000507226 G3V3G9 751 aa22.13■■□□□ 1.13
CCHCR1-221ENST00000507226 DCAF8Q5TAQ9 597 aa22.13■■□□□ 1.13
CCHCR1-221ENST00000507226 SIRT2Q8IXJ6 389 aa22.13■■□□□ 1.13
CCHCR1-221ENST00000507226 CEP126Q9P2H0 1117 aa22.13■■□□□ 1.13
CCHCR1-221ENST00000507226 TIAM2Q8IVF5 1701 aa22.13■■□□□ 1.13
CCHCR1-221ENST00000507226 RAD17O75943 681 aa22.12■■□□□ 1.13
CCHCR1-221ENST00000507226 FGFR2P21802 821 aa22.12■■□□□ 1.13
CCHCR1-221ENST00000507226 PUM3Q15397 648 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms