RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 SCN9AQ15858 1988 aa22.81■■□□□ 1.24
NPHP4-210ENST00000506941 GNAI3P08754 354 aa22.8■■□□□ 1.24
NPHP4-210ENST00000506941 AOC3Q16853 763 aa22.8■■□□□ 1.24
NPHP4-210ENST00000506941 ITPRIPQ8IWB1 547 aa22.8■■□□□ 1.24
NPHP4-210ENST00000506941 MPHOSPH8Q99549 860 aa22.8■■□□□ 1.24
NPHP4-210ENST00000506941 ANKIB1Q9P2G1 1089 aa22.8■■□□□ 1.24
NPHP4-210ENST00000506941 WTIPA6NIX2 430 aaPredicted RBP22.79■■□□□ 1.24
NPHP4-210ENST00000506941 SUPT20HQ8NEM7 779 aa22.79■■□□□ 1.24
NPHP4-210ENST00000506941 TBC1D16Q8TBP0 767 aa22.79■■□□□ 1.24
NPHP4-210ENST00000506941 GPR101Q96P66 508 aaPredicted RBP22.79■■□□□ 1.24
NPHP4-210ENST00000506941 XDHP47989 1333 aa22.79■■□□□ 1.24
NPHP4-210ENST00000506941 ZNF646O15015 1829 aaPredicted RBP22.78■■□□□ 1.24
NPHP4-210ENST00000506941 PPIP5K2O43314 1243 aa22.78■■□□□ 1.24
NPHP4-210ENST00000506941 WDR90Q96KV7 1748 aa22.78■■□□□ 1.24
NPHP4-210ENST00000506941 C6orf229H3BNL8 230 aa22.77■■□□□ 1.24
NPHP4-210ENST00000506941 UFL1O94874 794 aa22.77■■□□□ 1.24
NPHP4-210ENST00000506941 RFX5P48382 616 aaPredicted RBP22.77■■□□□ 1.24
NPHP4-210ENST00000506941 KIAA2012Q0VF49 1180 aa22.77■■□□□ 1.24
NPHP4-210ENST00000506941 TAF7LQ5H9L4 462 aa22.77■■□□□ 1.24
NPHP4-210ENST00000506941 C20orf194Q5TEA3 1177 aa22.77■■□□□ 1.24
NPHP4-210ENST00000506941 LARGE2Q8N3Y3 721 aa22.77■■□□□ 1.24
NPHP4-210ENST00000506941 KLHDC4Q8TBB5 520 aa22.77■■□□□ 1.24
NPHP4-210ENST00000506941 ZNF526Q8TF50 670 aaPredicted RBP22.77■■□□□ 1.24
NPHP4-210ENST00000506941 GGA1Q9UJY5 639 aa22.77■■□□□ 1.24
NPHP4-210ENST00000506941 CHRNDQ07001 517 aa22.76■■□□□ 1.23
NPHP4-210ENST00000506941 PUS3Q9BZE2 481 aaKnown RBP22.76■■□□□ 1.23
NPHP4-210ENST00000506941 VPS33BQ9H267 617 aa22.76■■□□□ 1.23
NPHP4-210ENST00000506941 ZNF541Q9H0D2 1346 aa22.76■■□□□ 1.23
NPHP4-210ENST00000506941 ZBTB7BO15156 539 aaPredicted RBP22.75■■□□□ 1.23
NPHP4-210ENST00000506941 MS4A1P11836 297 aa22.75■■□□□ 1.23
NPHP4-210ENST00000506941 LDHAL6AQ6ZMR3 332 aa22.75■■□□□ 1.23
NPHP4-210ENST00000506941 HDAC5Q9UQL6 1122 aa22.75■■□□□ 1.23
NPHP4-210ENST00000506941 FZD9O00144 591 aa22.74■■□□□ 1.23
NPHP4-210ENST00000506941 GNAI2P04899 355 aa22.74■■□□□ 1.23
NPHP4-210ENST00000506941 WASHC4Q2M389 1173 aa22.74■■□□□ 1.23
NPHP4-210ENST00000506941 HELBQ8NG08 1087 aaPredicted RBP22.74■■□□□ 1.23
NPHP4-210ENST00000506941 JDP2Q8WYK2 163 aa22.74■■□□□ 1.23
NPHP4-210ENST00000506941 CNNM1Q9NRU3 951 aa22.74■■□□□ 1.23
NPHP4-210ENST00000506941 SCN4AP35499 1836 aa22.73■■□□□ 1.23
NPHP4-210ENST00000506941 GLTPD2A6NH11 291 aa22.73■■□□□ 1.23
NPHP4-210ENST00000506941 RIMBP2O15034 1052 aa22.73■■□□□ 1.23
NPHP4-210ENST00000506941 ATP2B4P23634 1241 aa22.73■■□□□ 1.23
NPHP4-210ENST00000506941 MVPQ14764 893 aaKnown RBP22.73■■□□□ 1.23
NPHP4-210ENST00000506941 LRRC24Q50LG9 513 aa22.73■■□□□ 1.23
NPHP4-210ENST00000506941 NIM1KQ8IY84 436 aa22.73■■□□□ 1.23
NPHP4-210ENST00000506941 ANKRD2Q9GZV1 360 aa22.73■■□□□ 1.23
NPHP4-210ENST00000506941 COG6Q9Y2V7 657 aa22.73■■□□□ 1.23
NPHP4-210ENST00000506941 RIPOR2Q9Y4F9 1068 aa22.73■■□□□ 1.23
NPHP4-210ENST00000506941 SNAP23O00161 211 aa22.72■■□□□ 1.23
NPHP4-210ENST00000506941 TAF5LO75529 589 aa22.72■■□□□ 1.23
NPHP4-210ENST00000506941 PTPN12Q05209 780 aaKnown RBP22.72■■□□□ 1.23
NPHP4-210ENST00000506941 MTX1Q13505 466 aa22.72■■□□□ 1.23
NPHP4-210ENST00000506941 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.72■■□□□ 1.23
NPHP4-210ENST00000506941 EYA3Q99504 573 aa22.72■■□□□ 1.23
NPHP4-210ENST00000506941 C1orf115Q9H7X2 142 aa22.72■■□□□ 1.23
NPHP4-210ENST00000506941 PDE3AQ14432 1141 aa22.71■■□□□ 1.23
NPHP4-210ENST00000506941 MED23Q9ULK4 1368 aa22.71■■□□□ 1.23
NPHP4-210ENST00000506941 YDJCA8MPS7 323 aa22.7■■□□□ 1.22
NPHP4-210ENST00000506941 KLRK1P26718 216 aa22.7■■□□□ 1.22
NPHP4-210ENST00000506941 DBNDD1Q9H9R9 158 aa22.7■■□□□ 1.22
NPHP4-210ENST00000506941 GPBP1L1Q9HC44 474 aaPredicted RBP22.7■■□□□ 1.22
NPHP4-210ENST00000506941 LEMD3Q9Y2U8 911 aa22.7■■□□□ 1.22
NPHP4-210ENST00000506941 ZNF804BA4D1E1 1349 aa22.7■■□□□ 1.22
NPHP4-210ENST00000506941 MYH13Q9UKX3 1938 aa22.69■■□□□ 1.22
NPHP4-210ENST00000506941 ARAP2Q8WZ64 1704 aa22.69■■□□□ 1.22
NPHP4-210ENST00000506941 KDM2BQ8NHM5 1336 aa22.69■■□□□ 1.22
NPHP4-210ENST00000506941 IRS2Q9Y4H2 1338 aa22.69■■□□□ 1.22
NPHP4-210ENST00000506941 SRGAP3O43295 1099 aa22.69■■□□□ 1.22
NPHP4-210ENST00000506941 DDNO94850 711 aaPredicted RBP22.69■■□□□ 1.22
NPHP4-210ENST00000506941 RRP1P56182 461 aaKnown RBP22.69■■□□□ 1.22
NPHP4-210ENST00000506941 DOK7Q18PE1 504 aa22.69■■□□□ 1.22
NPHP4-210ENST00000506941 TXNRD3Q86VQ6 643 aa22.69■■□□□ 1.22
NPHP4-210ENST00000506941 NMRK2Q9NPI5 230 aa22.69■■□□□ 1.22
NPHP4-210ENST00000506941 ZNRF3Q9ULT6 936 aa22.69■■□□□ 1.22
NPHP4-210ENST00000506941 PA2G4Q9UQ80 394 aaKnown RBP22.69■■□□□ 1.22
NPHP4-210ENST00000506941 PNMA6EA0A0J9YXQ4 647 aa22.68■■□□□ 1.22
NPHP4-210ENST00000506941 DPY19L2Q6NUT2 758 aa22.68■■□□□ 1.22
NPHP4-210ENST00000506941 ATG9AQ7Z3C6 839 aa22.68■■□□□ 1.22
NPHP4-210ENST00000506941 ZC3H12CQ9C0D7 883 aaKnown RBP22.68■■□□□ 1.22
NPHP4-210ENST00000506941 MROH5Q6ZUA9 1318 aa22.67■■□□□ 1.22
NPHP4-210ENST00000506941 EYA2O00167 538 aa22.67■■□□□ 1.22
NPHP4-210ENST00000506941 ECE2O60344 883 aa22.67■■□□□ 1.22
NPHP4-210ENST00000506941 VGLL2Q8N8G2 317 aa22.67■■□□□ 1.22
NPHP4-210ENST00000506941 SIL1Q9H173 461 aa22.67■■□□□ 1.22
NPHP4-210ENST00000506941 DDX19BQ9UMR2 479 aa22.67■■□□□ 1.22
NPHP4-210ENST00000506941 KCNJ4P48050 445 aa22.66■■□□□ 1.22
NPHP4-210ENST00000506941 EIF6P56537 245 aaKnown RBP22.66■■□□□ 1.22
NPHP4-210ENST00000506941 CXCL9Q07325 125 aa22.66■■□□□ 1.22
NPHP4-210ENST00000506941 COPRSQ9NQ92 184 aa22.66■■□□□ 1.22
NPHP4-210ENST00000506941 POTECB2RU33 542 aa22.65■■□□□ 1.22
NPHP4-210ENST00000506941 METTL24Q5JXM2 366 aa22.65■■□□□ 1.22
NPHP4-210ENST00000506941 GPC2Q8N158 579 aa22.65■■□□□ 1.22
NPHP4-210ENST00000506941 RRAGCQ9HB90 399 aa22.65■■□□□ 1.22
NPHP4-210ENST00000506941 KCNQ5Q9NR82 932 aa22.65■■□□□ 1.22
NPHP4-210ENST00000506941 ZBTB40Q9NUA8 1239 aa22.65■■□□□ 1.22
NPHP4-210ENST00000506941 RAD17O75943 681 aa22.64■■□□□ 1.21
NPHP4-210ENST00000506941 POLA2Q14181 598 aa22.64■■□□□ 1.21
NPHP4-210ENST00000506941 KIF3CO14782 793 aa22.63■■□□□ 1.21
NPHP4-210ENST00000506941 CIAO1O76071 339 aa22.63■■□□□ 1.21
NPHP4-210ENST00000506941 ATP8B2P98198 1209 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms