RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 EPHX2P34913 555 aa19.66■□□□□ 0.74
MED28-204ENST00000506409 IGHMBP2P38935 993 aaKnown RBP19.66■□□□□ 0.74
MED28-204ENST00000506409 FOXO4P98177 505 aa19.66■□□□□ 0.74
MED28-204ENST00000506409 GPR101Q96P66 508 aaPredicted RBP19.66■□□□□ 0.74
MED28-204ENST00000506409 POTEIP0CG38 1075 aa19.65■□□□□ 0.74
MED28-204ENST00000506409 POTEJP0CG39 1038 aa19.65■□□□□ 0.74
MED28-204ENST00000506409 APLP1P51693 650 aa19.65■□□□□ 0.74
MED28-204ENST00000506409 EAPPQ56P03 285 aaPredicted RBP19.65■□□□□ 0.74
MED28-204ENST00000506409 CIAPIN1Q6FI81 312 aa19.65■□□□□ 0.74
MED28-204ENST00000506409 ZC3H12CQ9C0D7 883 aaKnown RBP19.65■□□□□ 0.74
MED28-204ENST00000506409 DBNDD1Q9H9R9 158 aa19.65■□□□□ 0.74
MED28-204ENST00000506409 CHMP3Q9Y3E7 222 aa19.65■□□□□ 0.74
MED28-204ENST00000506409 SPEF2Q9C093 1822 aa19.65■□□□□ 0.74
MED28-204ENST00000506409 ANKRD18BA2A2Z9 1011 aa19.64■□□□□ 0.73
MED28-204ENST00000506409 YDJCA8MPS7 323 aa19.64■□□□□ 0.73
MED28-204ENST00000506409 RAD17O75943 681 aa19.64■□□□□ 0.73
MED28-204ENST00000506409 SCNN1DP51172 638 aa19.64■□□□□ 0.73
MED28-204ENST00000506409 CHADLQ6NUI6 762 aa19.64■□□□□ 0.73
MED28-204ENST00000506409 MPHOSPH8Q99549 860 aa19.64■□□□□ 0.73
MED28-204ENST00000506409 MINPP1Q9UNW1 487 aa19.64■□□□□ 0.73
MED28-204ENST00000506409 ATP2B4P23634 1241 aa19.63■□□□□ 0.73
MED28-204ENST00000506409 IFIT5Q13325 482 aaKnown RBP19.63■□□□□ 0.73
MED28-204ENST00000506409 TNIP1Q15025 636 aa19.63■□□□□ 0.73
MED28-204ENST00000506409 EPHA10Q5JZY3 1008 aa19.63■□□□□ 0.73
MED28-204ENST00000506409 LMBR1LQ6UX01 489 aa19.63■□□□□ 0.73
MED28-204ENST00000506409 PNMA8AQ86V59 439 aaPredicted RBP19.63■□□□□ 0.73
MED28-204ENST00000506409 LDHDQ86WU2 507 aa19.63■□□□□ 0.73
MED28-204ENST00000506409 CEP350Q5VT06 3117 aa19.62■□□□□ 0.73
MED28-204ENST00000506409 ECE2O60344 883 aa19.62■□□□□ 0.73
MED28-204ENST00000506409 NBPF7P0C2Y1 421 aaPredicted RBP19.62■□□□□ 0.73
MED28-204ENST00000506409 RARSP54136 660 aaKnown RBP19.62■□□□□ 0.73
MED28-204ENST00000506409 DOK7Q18PE1 504 aa19.62■□□□□ 0.73
MED28-204ENST00000506409 UTYO14607 1347 aa19.61■□□□□ 0.73
MED28-204ENST00000506409 G3V3G9 751 aa19.61■□□□□ 0.73
MED28-204ENST00000506409 EPS15P42566 896 aa19.61■□□□□ 0.73
MED28-204ENST00000506409 BRPF1P55201 1214 aaPredicted RBP19.61■□□□□ 0.73
MED28-204ENST00000506409 DCAF8Q5TAQ9 597 aa19.61■□□□□ 0.73
MED28-204ENST00000506409 SUCLG2Q96I99 432 aa19.61■□□□□ 0.73
MED28-204ENST00000506409 NOB1Q9ULX3 412 aaKnown RBP19.61■□□□□ 0.73
MED28-204ENST00000506409 CLEC11AQ9Y240 323 aa19.61■□□□□ 0.73
MED28-204ENST00000506409 GMPSP49915 693 aaPredicted RBP19.6■□□□□ 0.73
MED28-204ENST00000506409 CCT4P50991 539 aaKnown RBP19.6■□□□□ 0.73
MED28-204ENST00000506409 CCDC57Q2TAC2 916 aa19.6■□□□□ 0.73
MED28-204ENST00000506409 ANKRD2Q9GZV1 360 aa19.6■□□□□ 0.73
MED28-204ENST00000506409 GPRC5DQ9NZD1 345 aa19.6■□□□□ 0.73
MED28-204ENST00000506409 TAF7LQ5H9L4 462 aa19.59■□□□□ 0.73
MED28-204ENST00000506409 API5Q9BZZ5 524 aaKnown RBP19.59■□□□□ 0.73
MED28-204ENST00000506409 KIF16BQ96L93 1317 aa19.58■□□□□ 0.73
MED28-204ENST00000506409 PSMD14O00487 310 aa19.58■□□□□ 0.72
MED28-204ENST00000506409 KAZALD1Q96I82 304 aa19.58■□□□□ 0.72
MED28-204ENST00000506409 LEMD3Q9Y2U8 911 aa19.58■□□□□ 0.72
MED28-204ENST00000506409 MED23Q9ULK4 1368 aa19.57■□□□□ 0.72
MED28-204ENST00000506409 ADAMTSL1Q8N6G6 1762 aa19.57■□□□□ 0.72
MED28-204ENST00000506409 WTIPA6NIX2 430 aaPredicted RBP19.57■□□□□ 0.72
MED28-204ENST00000506409 CHRNDQ07001 517 aa19.57■□□□□ 0.72
MED28-204ENST00000506409 USP50Q70EL3 339 aaPredicted RBP19.57■□□□□ 0.72
MED28-204ENST00000506409 USP44Q9H0E7 712 aa19.57■□□□□ 0.72
MED28-204ENST00000506409 BICC1Q9H694 974 aaKnown RBP19.57■□□□□ 0.72
MED28-204ENST00000506409 KCNQ5Q9NR82 932 aa19.57■□□□□ 0.72
MED28-204ENST00000506409 ADARB2Q9NS39 739 aaKnown RBP19.57■□□□□ 0.72
MED28-204ENST00000506409 ZBED9Q6R2W3 1325 aa19.56■□□□□ 0.72
MED28-204ENST00000506409 KCNJ4P48050 445 aa19.56■□□□□ 0.72
MED28-204ENST00000506409 HTRA3P83110 453 aa19.56■□□□□ 0.72
MED28-204ENST00000506409 ZNF594Q96JF6 807 aaPredicted RBP19.56■□□□□ 0.72
MED28-204ENST00000506409 ZBTB12Q9Y330 459 aaPredicted RBP19.56■□□□□ 0.72
MED28-204ENST00000506409 ZNF804BA4D1E1 1349 aa19.55■□□□□ 0.72
MED28-204ENST00000506409 RABL6Q3YEC7 729 aaPredicted RBP19.55■□□□□ 0.72
MED28-204ENST00000506409 MAP1SQ66K74 1059 aaPredicted RBP19.55■□□□□ 0.72
MED28-204ENST00000506409 LDHAL6AQ6ZMR3 332 aa19.55■□□□□ 0.72
MED28-204ENST00000506409 SCN9AQ15858 1988 aa19.54■□□□□ 0.72
MED28-204ENST00000506409 RPS12P25398 132 aaKnown RBP19.54■□□□□ 0.72
MED28-204ENST00000506409 PODNQ7Z5L7 613 aa19.54■□□□□ 0.72
MED28-204ENST00000506409 ARHGAP45Q92619 1136 aa19.54■□□□□ 0.72
MED28-204ENST00000506409 DPF2Q92785 391 aa19.54■□□□□ 0.72
MED28-204ENST00000506409 CNNM1Q9NRU3 951 aa19.54■□□□□ 0.72
MED28-204ENST00000506409 CNOT7Q9UIV1 285 aaKnown RBP19.54■□□□□ 0.72
MED28-204ENST00000506409 H7C1D1 291 aa19.53■□□□□ 0.72
MED28-204ENST00000506409 TAF5LO75529 589 aa19.53■□□□□ 0.72
MED28-204ENST00000506409 VIL1P09327 827 aaKnown RBP19.53■□□□□ 0.72
MED28-204ENST00000506409 MICALL2Q8IY33 904 aa19.53■□□□□ 0.72
MED28-204ENST00000506409 CNTROBQ8N137 903 aa19.53■□□□□ 0.72
MED28-204ENST00000506409 ANKRD44Q8N8A2 993 aa19.53■□□□□ 0.72
MED28-204ENST00000506409 HELBQ8NG08 1087 aaPredicted RBP19.53■□□□□ 0.72
MED28-204ENST00000506409 IPO8O15397 1037 aaKnown RBP19.52■□□□□ 0.72
MED28-204ENST00000506409 BCAR3O75815 825 aa19.52■□□□□ 0.72
MED28-204ENST00000506409 ITGBL1O95965 494 aaPredicted RBP19.52■□□□□ 0.72
MED28-204ENST00000506409 KLRK1P26718 216 aa19.52■□□□□ 0.72
MED28-204ENST00000506409 TXNRD3Q86VQ6 643 aa19.52■□□□□ 0.72
MED28-204ENST00000506409 COA1Q9GZY4 146 aa19.52■□□□□ 0.72
MED28-204ENST00000506409 PASKQ96RG2 1323 aa19.51■□□□□ 0.71
MED28-204ENST00000506409 SHTN1A0MZ66 631 aa19.51■□□□□ 0.71
MED28-204ENST00000506409 UBTFL1P0CB47 393 aaPredicted RBP19.51■□□□□ 0.71
MED28-204ENST00000506409 DNAJC5GQ8N7S2 189 aa19.51■□□□□ 0.71
MED28-204ENST00000506409 FRAT1Q92837 279 aaPredicted RBP19.51■□□□□ 0.71
MED28-204ENST00000506409 USP17L3A6NCW0 530 aa19.5■□□□□ 0.71
MED28-204ENST00000506409 USP17L4A6NCW7 530 aa19.5■□□□□ 0.71
MED28-204ENST00000506409 SNAP23O00161 211 aa19.5■□□□□ 0.71
MED28-204ENST00000506409 PLIN1O60240 522 aa19.5■□□□□ 0.71
MED28-204ENST00000506409 RSBN1LQ6PCB5 846 aaPredicted RBP19.5■□□□□ 0.71
MED28-204ENST00000506409 USP17L1Q7RTZ2 530 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms