RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 CCDC85AQ96PX6 553 aaPredicted RBP14.69□□□□□ -0.06
SIL1-208ENST00000505945 EYA3Q99504 573 aa14.69□□□□□ -0.06
SIL1-208ENST00000505945 BEGAINQ9BUH8 593 aa14.69□□□□□ -0.06
SIL1-208ENST00000505945 EGFRP00533 1210 aa14.68□□□□□ -0.06
SIL1-208ENST00000505945 PCCAP05165 728 aaPredicted RBP14.68□□□□□ -0.06
SIL1-208ENST00000505945 HSP90B1P14625 803 aaKnown RBP14.68□□□□□ -0.06
SIL1-208ENST00000505945 MAP2K2P36507 400 aa14.68□□□□□ -0.06
SIL1-208ENST00000505945 RBM26Q5T8P6 1007 aaKnown RBP14.68□□□□□ -0.06
SIL1-208ENST00000505945 CCDC30Q5VVM6 783 aa14.68□□□□□ -0.06
SIL1-208ENST00000505945 METTL22Q9BUU2 404 aaPredicted RBP14.68□□□□□ -0.06
SIL1-208ENST00000505945 ZC3H12CQ9C0D7 883 aaKnown RBP14.68□□□□□ -0.06
SIL1-208ENST00000505945 CWC25Q9NXE8 425 aaPredicted RBP14.68□□□□□ -0.06
SIL1-208ENST00000505945 PDE8AO60658 829 aa14.67□□□□□ -0.06
SIL1-208ENST00000505945 DDX58O95786 925 aaKnown RBP14.67□□□□□ -0.06
SIL1-208ENST00000505945 CCDC152Q4G0S7 254 aa14.67□□□□□ -0.06
SIL1-208ENST00000505945 CCDC184Q52MB2 194 aa14.67□□□□□ -0.06
SIL1-208ENST00000505945 PODXL2Q9NZ53 605 aa14.67□□□□□ -0.06
SIL1-208ENST00000505945 ANKIB1Q9P2G1 1089 aa14.67□□□□□ -0.06
SIL1-208ENST00000505945 MAP3K2Q9Y2U5 619 aa14.67□□□□□ -0.06
SIL1-208ENST00000505945 RTL9Q8NET4 1388 aa14.67□□□□□ -0.06
SIL1-208ENST00000505945 G3V3G9 751 aa14.66□□□□□ -0.06
SIL1-208ENST00000505945 UFL1O94874 794 aa14.66□□□□□ -0.06
SIL1-208ENST00000505945 RPS12P25398 132 aaKnown RBP14.66□□□□□ -0.06
SIL1-208ENST00000505945 DCAF8Q5TAQ9 597 aa14.66□□□□□ -0.06
SIL1-208ENST00000505945 TSR2Q969E8 191 aaKnown RBP14.66□□□□□ -0.06
SIL1-208ENST00000505945 HHIPL1Q96JK4 782 aa14.66□□□□□ -0.06
SIL1-208ENST00000505945 TSKSQ9UJT2 592 aa14.66□□□□□ -0.06
SIL1-208ENST00000505945 PI4KAP2A4QPH2 592 aa14.65□□□□□ -0.06
SIL1-208ENST00000505945 KRT26Q7Z3Y9 468 aa14.65□□□□□ -0.06
SIL1-208ENST00000505945 PI4KAP1Q8N8J0 262 aa14.65□□□□□ -0.06
SIL1-208ENST00000505945 CHMP4AQ9BY43 222 aa14.65□□□□□ -0.06
SIL1-208ENST00000505945 GGA1Q9UJY5 639 aa14.65□□□□□ -0.06
SIL1-208ENST00000505945 THSD7BQ9C0I4 1608 aa14.65□□□□□ -0.06
SIL1-208ENST00000505945 POLR2AP24928 1970 aaKnown RBP14.65□□□□□ -0.06
SIL1-208ENST00000505945 IGKV5-2P06315 115 aa14.64□□□□□ -0.07
SIL1-208ENST00000505945 VIL1P09327 827 aaKnown RBP14.64□□□□□ -0.07
SIL1-208ENST00000505945 KSR2Q6VAB6 950 aa14.64□□□□□ -0.07
SIL1-208ENST00000505945 ANKRD18AQ8IVF6 992 aa14.64□□□□□ -0.07
SIL1-208ENST00000505945 DCPSQ96C86 337 aaKnown RBP14.64□□□□□ -0.07
SIL1-208ENST00000505945 SCN9AQ15858 1988 aa14.64□□□□□ -0.07
SIL1-208ENST00000505945 WTIPA6NIX2 430 aaPredicted RBP14.63□□□□□ -0.07
SIL1-208ENST00000505945 ADM5C9JUS6 153 aa14.63□□□□□ -0.07
SIL1-208ENST00000505945 HUNKP57058 714 aa14.63□□□□□ -0.07
SIL1-208ENST00000505945 KIF4BQ2VIQ3 1234 aa14.63□□□□□ -0.07
SIL1-208ENST00000505945 ABHD8Q96I13 439 aa14.63□□□□□ -0.07
SIL1-208ENST00000505945 BRPF1P55201 1214 aaPredicted RBP14.62□□□□□ -0.07
SIL1-208ENST00000505945 CTSWP56202 376 aa14.62□□□□□ -0.07
SIL1-208ENST00000505945 CWF19L2Q2TBE0 894 aaKnown RBP14.62□□□□□ -0.07
SIL1-208ENST00000505945 G2E3Q7L622 706 aa14.62□□□□□ -0.07
SIL1-208ENST00000505945 WWC1Q8IX03 1113 aa14.62□□□□□ -0.07
SIL1-208ENST00000505945 ZIC5Q96T25 663 aa14.62□□□□□ -0.07
SIL1-208ENST00000505945 STK31Q9BXU1 1019 aa14.62□□□□□ -0.07
SIL1-208ENST00000505945 ASTN2O75129 1339 aaPredicted RBP14.62□□□□□ -0.07
SIL1-208ENST00000505945 XDHP47989 1333 aa14.62□□□□□ -0.07
SIL1-208ENST00000505945 NEXNQ0ZGT2 675 aa14.61□□□□□ -0.07
SIL1-208ENST00000505945 TWISTNBQ3B726 338 aaPredicted RBP14.61□□□□□ -0.07
SIL1-208ENST00000505945 RSBN1LQ6PCB5 846 aaPredicted RBP14.61□□□□□ -0.07
SIL1-208ENST00000505945 TTLL11Q8NHH1 800 aa14.61□□□□□ -0.07
SIL1-208ENST00000505945 CDC5LQ99459 802 aaKnown RBP14.61□□□□□ -0.07
SIL1-208ENST00000505945 CA12O43570 354 aa14.6□□□□□ -0.07
SIL1-208ENST00000505945 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
SIL1-208ENST00000505945 ATP2B4P23634 1241 aa14.6□□□□□ -0.07
SIL1-208ENST00000505945 NOGQ13253 232 aa14.6□□□□□ -0.07
SIL1-208ENST00000505945 CCDC27Q2M243 656 aa14.6□□□□□ -0.07
SIL1-208ENST00000505945 RGMBQ6NW40 437 aa14.6□□□□□ -0.07
SIL1-208ENST00000505945 SULF1Q8IWU6 871 aa14.6□□□□□ -0.07
SIL1-208ENST00000505945 C2orf69Q8N8R5 385 aa14.6□□□□□ -0.07
SIL1-208ENST00000505945 GREM2Q9H772 168 aa14.6□□□□□ -0.07
SIL1-208ENST00000505945 GBA2Q9HCG7 927 aaPredicted RBP14.6□□□□□ -0.07
SIL1-208ENST00000505945 GGA3Q9NZ52 723 aa14.6□□□□□ -0.07
SIL1-208ENST00000505945 NEURL1BA8MQ27 555 aa14.59□□□□□ -0.07
SIL1-208ENST00000505945 ZNF280AP59817 542 aaPredicted RBP14.59□□□□□ -0.07
SIL1-208ENST00000505945 SCARF1Q14162 830 aa14.59□□□□□ -0.07
SIL1-208ENST00000505945 AGBL3Q8NEM8 1001 aa14.59□□□□□ -0.07
SIL1-208ENST00000505945 GMLQ99445 158 aa14.59□□□□□ -0.07
SIL1-208ENST00000505945 BSDC1Q9NW68 430 aaPredicted RBP14.59□□□□□ -0.07
SIL1-208ENST00000505945 MINPP1Q9UNW1 487 aa14.59□□□□□ -0.07
SIL1-208ENST00000505945 USP17L3A6NCW0 530 aa14.58□□□□□ -0.08
SIL1-208ENST00000505945 USP17L4A6NCW7 530 aa14.58□□□□□ -0.08
SIL1-208ENST00000505945 FAM155AB1AL88 458 aaPredicted RBP14.58□□□□□ -0.08
SIL1-208ENST00000505945 H7C1W4 665 aa14.58□□□□□ -0.08
SIL1-208ENST00000505945 USP17L8P0C7I0 530 aa14.58□□□□□ -0.08
SIL1-208ENST00000505945 ANGEL2Q5VTE6 544 aaKnown RBP14.58□□□□□ -0.08
SIL1-208ENST00000505945 USP17L1Q7RTZ2 530 aa14.58□□□□□ -0.08
SIL1-208ENST00000505945 UBE3BQ7Z3V4 1068 aa14.58□□□□□ -0.08
SIL1-208ENST00000505945 PODNQ7Z5L7 613 aa14.58□□□□□ -0.08
SIL1-208ENST00000505945 CASP8AP2Q9UKL3 1982 aa14.58□□□□□ -0.08
SIL1-208ENST00000505945 CCDC85CA6NKD9 419 aa14.57□□□□□ -0.08
SIL1-208ENST00000505945 ZNF157P51786 506 aaPredicted RBP14.57□□□□□ -0.08
SIL1-208ENST00000505945 CCDC102AQ96A19 550 aa14.57□□□□□ -0.08
SIL1-208ENST00000505945 CDCA5Q96FF9 252 aa14.57□□□□□ -0.08
SIL1-208ENST00000505945 MYOZ2Q9NPC6 264 aa14.57□□□□□ -0.08
SIL1-208ENST00000505945 CCT4P50991 539 aaKnown RBP14.56□□□□□ -0.08
SIL1-208ENST00000505945 KIF23Q02241 960 aaPredicted RBP14.56□□□□□ -0.08
SIL1-208ENST00000505945 GCKRQ14397 625 aa14.56□□□□□ -0.08
SIL1-208ENST00000505945 MXD3Q9BW11 206 aa14.56□□□□□ -0.08
SIL1-208ENST00000505945 SCAF8Q9UPN6 1271 aaKnown RBP14.56□□□□□ -0.08
SIL1-208ENST00000505945 SALL2Q9Y467 1007 aaPredicted RBP14.56□□□□□ -0.08
SIL1-208ENST00000505945 IL16Q14005 1332 aa14.56□□□□□ -0.08
SIL1-208ENST00000505945 FLIIQ13045 1269 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms