RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 ZC3H12CQ9C0D7 883 aaKnown RBP15.2■□□□□ 0.02
CCHCR1-219ENST00000505392 SF3B3Q15393 1217 aaKnown RBP15.19■□□□□ 0.02
CCHCR1-219ENST00000505392 TBC1D16Q8TBP0 767 aa15.19■□□□□ 0.02
CCHCR1-219ENST00000505392 FAM89AQ96GI7 184 aa15.19■□□□□ 0.02
CCHCR1-219ENST00000505392 FKBP1BP68106 108 aa15.18■□□□□ 0.02
CCHCR1-219ENST00000505392 MOB2Q70IA6 237 aa15.18■□□□□ 0.02
CCHCR1-219ENST00000505392 PNNQ9H307 717 aaKnown RBP15.18■□□□□ 0.02
CCHCR1-219ENST00000505392 POLR2AP24928 1970 aaKnown RBP15.18■□□□□ 0.02
CCHCR1-219ENST00000505392 KDM3BQ7LBC6 1761 aa15.17■□□□□ 0.02
CCHCR1-219ENST00000505392 DUOX1Q9NRD9 1551 aa15.17■□□□□ 0.02
CCHCR1-219ENST00000505392 UBE2Q2LH0YL09 131 aa15.17■□□□□ 0.02
CCHCR1-219ENST00000505392 RPS8P62241 208 aaKnown RBP15.17■□□□□ 0.02
CCHCR1-219ENST00000505392 RTL5Q5HYW3 569 aaPredicted RBP15.17■□□□□ 0.02
CCHCR1-219ENST00000505392 SCAF8Q9UPN6 1271 aaKnown RBP15.17■□□□□ 0.02
CCHCR1-219ENST00000505392 MAPK8IP3Q9UPT6 1336 aa15.17■□□□□ 0.02
CCHCR1-219ENST00000505392 ATP5J2-PTCD1G3V325 749 aa15.16■□□□□ 0.02
CCHCR1-219ENST00000505392 GPR25O00155 361 aa15.16■□□□□ 0.02
CCHCR1-219ENST00000505392 RIPK4P57078 832 aa15.16■□□□□ 0.02
CCHCR1-219ENST00000505392 ZNF280AP59817 542 aaPredicted RBP15.16■□□□□ 0.02
CCHCR1-219ENST00000505392 GCC1Q96CN9 775 aa15.16■□□□□ 0.02
CCHCR1-219ENST00000505392 TM4SF4P48230 202 aa15.15■□□□□ 0.02
CCHCR1-219ENST00000505392 PRAMEF18Q5VWM3 479 aa15.15■□□□□ 0.02
CCHCR1-219ENST00000505392 RSBN1LQ6PCB5 846 aaPredicted RBP15.15■□□□□ 0.02
CCHCR1-219ENST00000505392 FBXO46Q6PJ61 603 aaPredicted RBP15.15■□□□□ 0.02
CCHCR1-219ENST00000505392 ANKRD13DQ6ZTN6 518 aa15.15■□□□□ 0.02
CCHCR1-219ENST00000505392 AGBL3Q8NEM8 1001 aa15.15■□□□□ 0.02
CCHCR1-219ENST00000505392 ISCA1Q9BUE6 129 aa15.15■□□□□ 0.02
CCHCR1-219ENST00000505392 BABAM1Q9NWV8 329 aa15.15■□□□□ 0.02
CCHCR1-219ENST00000505392 ANKIB1Q9P2G1 1089 aa15.15■□□□□ 0.02
CCHCR1-219ENST00000505392 AKAP11Q9UKA4 1901 aa15.15■□□□□ 0.02
CCHCR1-219ENST00000505392 TAF1P21675 1872 aa15.14■□□□□ 0.01
CCHCR1-219ENST00000505392 USP17L8P0C7I0 530 aa15.14■□□□□ 0.01
CCHCR1-219ENST00000505392 PLBD2Q8NHP8 589 aa15.14■□□□□ 0.01
CCHCR1-219ENST00000505392 MYOZ2Q9NPC6 264 aa15.14■□□□□ 0.01
CCHCR1-219ENST00000505392 ANKRD36CQ5JPF3 1778 aa15.13■□□□□ 0.01
CCHCR1-219ENST00000505392 IRS4O14654 1257 aaPredicted RBP15.13■□□□□ 0.01
CCHCR1-219ENST00000505392 UFL1O94874 794 aa15.13■□□□□ 0.01
CCHCR1-219ENST00000505392 MKRN3Q13064 507 aaKnown RBP15.13■□□□□ 0.01
CCHCR1-219ENST00000505392 TTLL12Q14166 644 aaPredicted RBP15.13■□□□□ 0.01
CCHCR1-219ENST00000505392 KRT24Q2M2I5 525 aa15.13■□□□□ 0.01
CCHCR1-219ENST00000505392 PODXL2Q9NZ53 605 aa15.13■□□□□ 0.01
CCHCR1-219ENST00000505392 CHPF2Q9P2E5 772 aa15.13■□□□□ 0.01
CCHCR1-219ENST00000505392 GGA1Q9UJY5 639 aa15.13■□□□□ 0.01
CCHCR1-219ENST00000505392 NOM1Q5C9Z4 860 aaKnown RBP15.12■□□□□ 0.01
CCHCR1-219ENST00000505392 HABP4Q5JVS0 413 aaKnown RBP15.12■□□□□ 0.01
CCHCR1-219ENST00000505392 SEC31BQ9NQW1 1179 aa15.12■□□□□ 0.01
CCHCR1-219ENST00000505392 PITPNM2Q9BZ72 1349 aa15.12■□□□□ 0.01
CCHCR1-219ENST00000505392 LAMB2P55268 1798 aa15.11■□□□□ 0.01
CCHCR1-219ENST00000505392 FKTNO75072 461 aa15.11■□□□□ 0.01
CCHCR1-219ENST00000505392 GMLQ99445 158 aa15.11■□□□□ 0.01
CCHCR1-219ENST00000505392 R3HDMLQ9H3Y0 253 aa15.11■□□□□ 0.01
CCHCR1-219ENST00000505392 DLG5Q8TDM6 1919 aa15.1■□□□□ 0.01
CCHCR1-219ENST00000505392 NBPF9Q3BBW0 867 aa15.1■□□□□ 0.01
CCHCR1-219ENST00000505392 USP17L3A6NCW0 530 aa15.09■□□□□ 0.01
CCHCR1-219ENST00000505392 USP17L4A6NCW7 530 aa15.09■□□□□ 0.01
CCHCR1-219ENST00000505392 TMPOP42166 694 aaKnown RBP15.09■□□□□ 0.01
CCHCR1-219ENST00000505392 SREBF2Q12772 1141 aa15.09■□□□□ 0.01
CCHCR1-219ENST00000505392 TRIM28Q13263 835 aaKnown RBP15.09■□□□□ 0.01
CCHCR1-219ENST00000505392 HDGFL1Q5TGJ6 251 aa15.09■□□□□ 0.01
CCHCR1-219ENST00000505392 USP17L1Q7RTZ2 530 aa15.09■□□□□ 0.01
CCHCR1-219ENST00000505392 PODNQ7Z5L7 613 aa15.09■□□□□ 0.01
CCHCR1-219ENST00000505392 LAS1LQ9Y4W2 734 aaKnown RBP15.09■□□□□ 0.01
CCHCR1-219ENST00000505392 CHL1O00533 1208 aa15.08■□□□□ 0
CCHCR1-219ENST00000505392 NF2P35240 595 aa15.08■□□□□ 0
CCHCR1-219ENST00000505392 LMOD3Q0VAK6 560 aa15.08■□□□□ 0
CCHCR1-219ENST00000505392 DBF4Q9UBU7 674 aaPredicted RBP15.08■□□□□ 0
CCHCR1-219ENST00000505392 LRRC37AA6NMS7 1700 aa15.08■□□□□ 0
CCHCR1-219ENST00000505392 POTEFA5A3E0 1075 aa15.07■□□□□ 0
CCHCR1-219ENST00000505392 PTPN12Q05209 780 aaKnown RBP15.07■□□□□ 0
CCHCR1-219ENST00000505392 PRKG1Q13976 671 aa15.07■□□□□ 0
CCHCR1-219ENST00000505392 NEUROD2Q15784 382 aa15.07■□□□□ 0
CCHCR1-219ENST00000505392 OGFOD1Q8N543 542 aa15.07■□□□□ 0
CCHCR1-219ENST00000505392 ZBTB38Q8NAP3 1195 aaPredicted RBP15.07■□□□□ 0
CCHCR1-219ENST00000505392 CCDC85AQ96PX6 553 aaPredicted RBP15.07■□□□□ 0
CCHCR1-219ENST00000505392 CFHR5Q9BXR6 569 aa15.07■□□□□ 0
CCHCR1-219ENST00000505392 TRIM17Q9Y577 477 aa15.07■□□□□ 0
CCHCR1-219ENST00000505392 COL4A1P02462 1669 aa15.06■□□□□ 0
CCHCR1-219ENST00000505392 WNT10BO00744 389 aa15.06■□□□□ 0
CCHCR1-219ENST00000505392 HSP90B1P14625 803 aaKnown RBP15.06■□□□□ 0
CCHCR1-219ENST00000505392 ATP2B4P23634 1241 aa15.06■□□□□ 0
CCHCR1-219ENST00000505392 CCDC152Q4G0S7 254 aa15.06■□□□□ 0
CCHCR1-219ENST00000505392 INTS3Q68E01 1043 aaKnown RBP15.06■□□□□ 0
CCHCR1-219ENST00000505392 ARMC9Q7Z3E5 817 aa15.06■□□□□ 0
CCHCR1-219ENST00000505392 RIC3Q7Z5B4 369 aa15.06■□□□□ 0
CCHCR1-219ENST00000505392 MXD3Q9BW11 206 aa15.06■□□□□ 0
CCHCR1-219ENST00000505392 HYPKQ9NX55 129 aa15.06■□□□□ 0
CCHCR1-219ENST00000505392 PAPPA2Q9BXP8 1791 aa15.06■□□□□ 0
CCHCR1-219ENST00000505392 SCN9AQ15858 1988 aa15.05■□□□□ 0
CCHCR1-219ENST00000505392 WTIPA6NIX2 430 aaPredicted RBP15.05■□□□□ -0
CCHCR1-219ENST00000505392 ALDH1A1P00352 501 aa15.05■□□□□ -0
CCHCR1-219ENST00000505392 JARID2Q92833 1246 aaPredicted RBP15.05■□□□□ -0
CCHCR1-219ENST00000505392 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.05■□□□□ -0
CCHCR1-219ENST00000505392 ZNF609O15014 1411 aa15.04■□□□□ -0
CCHCR1-219ENST00000505392 XDHP47989 1333 aa15.04■□□□□ -0
CCHCR1-219ENST00000505392 PDE8AO60658 829 aa15.04■□□□□ -0
CCHCR1-219ENST00000505392 SPRYD7Q5W111 196 aa15.04■□□□□ -0
CCHCR1-219ENST00000505392 ANKRD18AQ8IVF6 992 aa15.04■□□□□ -0
CCHCR1-219ENST00000505392 FBXW7Q969H0 707 aa15.04■□□□□ -0
CCHCR1-219ENST00000505392 DDX60Q8IY21 1712 aaKnown RBP15.03■□□□□ -0
CCHCR1-219ENST00000505392 INHBEP58166 350 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms