RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 NFKBIEO00221 500 aa15.53■□□□□ 0.08
SNCA-208ENST00000505199 SRGAP3O43295 1099 aa15.53■□□□□ 0.08
SNCA-208ENST00000505199 CENPBP07199 599 aaPredicted RBP15.53■□□□□ 0.08
SNCA-208ENST00000505199 RFX5P48382 616 aaPredicted RBP15.53■□□□□ 0.08
SNCA-208ENST00000505199 C20orf194Q5TEA3 1177 aa15.53■□□□□ 0.08
SNCA-208ENST00000505199 DPP8Q6V1X1 898 aaPredicted RBP15.53■□□□□ 0.08
SNCA-208ENST00000505199 SSH3Q8TE77 659 aa15.53■□□□□ 0.08
SNCA-208ENST00000505199 MINPP1Q9UNW1 487 aa15.53■□□□□ 0.08
SNCA-208ENST00000505199 DICER1Q9UPY3 1922 aaKnown RBP15.53■□□□□ 0.08
SNCA-208ENST00000505199 HMMRO75330 724 aa15.52■□□□□ 0.08
SNCA-208ENST00000505199 ATP8B2P98198 1209 aa15.52■□□□□ 0.08
SNCA-208ENST00000505199 PTPN12Q05209 780 aaKnown RBP15.52■□□□□ 0.08
SNCA-208ENST00000505199 POLA2Q14181 598 aa15.52■□□□□ 0.08
SNCA-208ENST00000505199 CCDC85AQ96PX6 553 aaPredicted RBP15.52■□□□□ 0.08
SNCA-208ENST00000505199 EYA3Q99504 573 aa15.52■□□□□ 0.08
SNCA-208ENST00000505199 RIPOR2Q9Y4F9 1068 aa15.52■□□□□ 0.08
SNCA-208ENST00000505199 ATP2B4P23634 1241 aa15.51■□□□□ 0.07
SNCA-208ENST00000505199 IL15P40933 162 aaPredicted RBP15.51■□□□□ 0.07
SNCA-208ENST00000505199 C15orf52Q6ZUT6 534 aaKnown RBP15.51■□□□□ 0.07
SNCA-208ENST00000505199 ANKIB1Q9P2G1 1089 aa15.51■□□□□ 0.07
SNCA-208ENST00000505199 NSFL1CQ9UNZ2 370 aaKnown RBP15.51■□□□□ 0.07
SNCA-208ENST00000505199 COL4A1P02462 1669 aa15.51■□□□□ 0.07
SNCA-208ENST00000505199 DUOX1Q9NRD9 1551 aa15.5■□□□□ 0.07
SNCA-208ENST00000505199 EYA2O00167 538 aa15.5■□□□□ 0.07
SNCA-208ENST00000505199 KIAA2012Q0VF49 1180 aa15.5■□□□□ 0.07
SNCA-208ENST00000505199 CEP85Q6P2H3 762 aa15.5■□□□□ 0.07
SNCA-208ENST00000505199 CNNM1Q9NRU3 951 aa15.5■□□□□ 0.07
SNCA-208ENST00000505199 GGA1Q9UJY5 639 aa15.5■□□□□ 0.07
SNCA-208ENST00000505199 SUPT16HQ9Y5B9 1047 aaKnown RBP15.5■□□□□ 0.07
SNCA-208ENST00000505199 SPEF2Q9C093 1822 aa15.5■□□□□ 0.07
SNCA-208ENST00000505199 MED23Q9ULK4 1368 aa15.49■□□□□ 0.07
SNCA-208ENST00000505199 ZBTB22O15209 634 aa15.49■□□□□ 0.07
SNCA-208ENST00000505199 IARSP41252 1262 aaKnown RBP15.49■□□□□ 0.07
SNCA-208ENST00000505199 CHRNDQ07001 517 aa15.49■□□□□ 0.07
SNCA-208ENST00000505199 UBE4AQ14139 1066 aa15.49■□□□□ 0.07
SNCA-208ENST00000505199 HSP90AB4PQ58FF6 505 aa15.49■□□□□ 0.07
SNCA-208ENST00000505199 TBC1D16Q8TBP0 767 aa15.49■□□□□ 0.07
SNCA-208ENST00000505199 NOP58Q9Y2X3 529 aaKnown RBP15.49■□□□□ 0.07
SNCA-208ENST00000505199 A0A1B0GUL6 1792 aa15.49■□□□□ 0.07
SNCA-208ENST00000505199 PDE8BO95263 885 aa15.48■□□□□ 0.07
SNCA-208ENST00000505199 GPSM2P81274 684 aa15.48■□□□□ 0.07
SNCA-208ENST00000505199 JDP2Q8WYK2 163 aa15.48■□□□□ 0.07
SNCA-208ENST00000505199 WWC3Q9ULE0 1092 aa15.48■□□□□ 0.07
SNCA-208ENST00000505199 PNMA6EA0A0J9YXQ4 647 aa15.47■□□□□ 0.07
SNCA-208ENST00000505199 WASHC4Q2M389 1173 aa15.47■□□□□ 0.07
SNCA-208ENST00000505199 OLFM4Q6UX06 510 aa15.47■□□□□ 0.07
SNCA-208ENST00000505199 VGLL2Q8N8G2 317 aa15.47■□□□□ 0.07
SNCA-208ENST00000505199 ZC3H12CQ9C0D7 883 aaKnown RBP15.47■□□□□ 0.07
SNCA-208ENST00000505199 ZNF219Q9P2Y4 722 aaPredicted RBP15.47■□□□□ 0.07
SNCA-208ENST00000505199 POLLQ9UGP5 575 aa15.47■□□□□ 0.07
SNCA-208ENST00000505199 ZNF804BA4D1E1 1349 aa15.46■□□□□ 0.07
SNCA-208ENST00000505199 CCDC88AQ3V6T2 1871 aa15.46■□□□□ 0.07
SNCA-208ENST00000505199 UFL1O94874 794 aa15.46■□□□□ 0.07
SNCA-208ENST00000505199 ATG9AQ7Z3C6 839 aa15.46■□□□□ 0.07
SNCA-208ENST00000505199 ERC1Q8IUD2 1116 aa15.46■□□□□ 0.07
SNCA-208ENST00000505199 ZNF594Q96JF6 807 aaPredicted RBP15.46■□□□□ 0.07
SNCA-208ENST00000505199 C6orf229H3BNL8 230 aa15.45■□□□□ 0.06
SNCA-208ENST00000505199 FZD9O00144 591 aa15.45■□□□□ 0.06
SNCA-208ENST00000505199 PUM3Q15397 648 aaKnown RBP15.45■□□□□ 0.06
SNCA-208ENST00000505199 METTL24Q5JXM2 366 aa15.45■□□□□ 0.06
SNCA-208ENST00000505199 C9orf131Q5VYM1 1079 aa15.45■□□□□ 0.06
SNCA-208ENST00000505199 PODNQ7Z5L7 613 aa15.45■□□□□ 0.06
SNCA-208ENST00000505199 GPR108Q9NPR9 543 aa15.45■□□□□ 0.06
SNCA-208ENST00000505199 CEP126Q9P2H0 1117 aa15.45■□□□□ 0.06
SNCA-208ENST00000505199 AKAP2Q9Y2D5 859 aa15.45■□□□□ 0.06
SNCA-208ENST00000505199 TIAM2Q8IVF5 1701 aa15.44■□□□□ 0.06
SNCA-208ENST00000505199 PPIP5K2O43314 1243 aa15.44■□□□□ 0.06
SNCA-208ENST00000505199 KCNJ4P48050 445 aa15.44■□□□□ 0.06
SNCA-208ENST00000505199 RASSF7Q02833 373 aa15.44■□□□□ 0.06
SNCA-208ENST00000505199 G3BP1Q13283 466 aaKnown RBP eCLIP15.44■□□□□ 0.06
SNCA-208ENST00000505199 LRRC24Q50LG9 513 aa15.44■□□□□ 0.06
SNCA-208ENST00000505199 LARGE2Q8N3Y3 721 aa15.44■□□□□ 0.06
SNCA-208ENST00000505199 PUS3Q9BZE2 481 aaKnown RBP15.44■□□□□ 0.06
SNCA-208ENST00000505199 COA1Q9GZY4 146 aa15.44■□□□□ 0.06
SNCA-208ENST00000505199 ZNF277Q9NRM2 450 aaPredicted RBP15.44■□□□□ 0.06
SNCA-208ENST00000505199 RNF181Q9P0P0 153 aa15.44■□□□□ 0.06
SNCA-208ENST00000505199 ZNF609O15014 1411 aa15.43■□□□□ 0.06
SNCA-208ENST00000505199 DPY19L2Q6NUT2 758 aa15.43■□□□□ 0.06
SNCA-208ENST00000505199 NIM1KQ8IY84 436 aa15.43■□□□□ 0.06
SNCA-208ENST00000505199 KLHDC4Q8TBB5 520 aa15.43■□□□□ 0.06
SNCA-208ENST00000505199 LPIN2Q92539 896 aa15.43■□□□□ 0.06
SNCA-208ENST00000505199 CRBNQ96SW2 442 aa15.43■□□□□ 0.06
SNCA-208ENST00000505199 C1orf115Q9H7X2 142 aa15.43■□□□□ 0.06
SNCA-208ENST00000505199 ZNRF3Q9ULT6 936 aa15.43■□□□□ 0.06
SNCA-208ENST00000505199 IRS2Q9Y4H2 1338 aa15.43■□□□□ 0.06
SNCA-208ENST00000505199 RAB11FIP3O75154 756 aa15.42■□□□□ 0.06
SNCA-208ENST00000505199 IFIT1P09914 478 aaKnown RBP15.42■□□□□ 0.06
SNCA-208ENST00000505199 FGFR2P21802 821 aa15.42■□□□□ 0.06
SNCA-208ENST00000505199 MMP14P50281 582 aa15.42■□□□□ 0.06
SNCA-208ENST00000505199 PRELPP51888 382 aa15.42■□□□□ 0.06
SNCA-208ENST00000505199 SIRT2Q8IXJ6 389 aa15.42■□□□□ 0.06
SNCA-208ENST00000505199 SURF6O75683 361 aaKnown RBP15.41■□□□□ 0.06
SNCA-208ENST00000505199 HDAC1Q13547 482 aaPredicted RBP15.41■□□□□ 0.06
SNCA-208ENST00000505199 AOC3Q16853 763 aa15.41■□□□□ 0.06
SNCA-208ENST00000505199 ZNF804AQ7Z570 1209 aa15.41■□□□□ 0.06
SNCA-208ENST00000505199 PA2G4Q9UQ80 394 aaKnown RBP15.41■□□□□ 0.06
SNCA-208ENST00000505199 PSME4Q14997 1843 aa15.4■□□□□ 0.06
SNCA-208ENST00000505199 ARAP2Q8WZ64 1704 aa15.4■□□□□ 0.06
SNCA-208ENST00000505199 TAF5LO75529 589 aa15.4■□□□□ 0.06
SNCA-208ENST00000505199 SLC5A1P13866 664 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms