RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 ERC1Q8IUD2 1116 aa12.73□□□□□ -0.37
RFC1-210ENST00000505077 GCC1Q96CN9 775 aa12.73□□□□□ -0.37
RFC1-210ENST00000505077 PPP4R2Q9NY27 417 aa12.73□□□□□ -0.37
RFC1-210ENST00000505077 SBF1O95248 1867 aa12.72□□□□□ -0.37
RFC1-210ENST00000505077 MROH5Q6ZUA9 1318 aa12.72□□□□□ -0.37
RFC1-210ENST00000505077 RPS8P62241 208 aaKnown RBP12.72□□□□□ -0.37
RFC1-210ENST00000505077 CCDC85AQ96PX6 553 aaPredicted RBP12.72□□□□□ -0.37
RFC1-210ENST00000505077 MPHOSPH8Q99549 860 aa12.72□□□□□ -0.37
RFC1-210ENST00000505077 SEC31BQ9NQW1 1179 aa12.72□□□□□ -0.37
RFC1-210ENST00000505077 BSDC1Q9NW68 430 aaPredicted RBP12.72□□□□□ -0.37
RFC1-210ENST00000505077 EYA2O00167 538 aa12.71□□□□□ -0.37
RFC1-210ENST00000505077 RAB11FIP3O75154 756 aa12.71□□□□□ -0.37
RFC1-210ENST00000505077 CHRNA5P30532 468 aa12.71□□□□□ -0.37
RFC1-210ENST00000505077 IL15P40933 162 aaPredicted RBP12.71□□□□□ -0.37
RFC1-210ENST00000505077 GRIPAP1Q4V328 841 aa12.71□□□□□ -0.37
RFC1-210ENST00000505077 LDHAL6AQ6ZMR3 332 aa12.71□□□□□ -0.37
RFC1-210ENST00000505077 TTLL6Q8N841 843 aa12.71□□□□□ -0.37
RFC1-210ENST00000505077 CELF1Q92879 486 aaKnown RBP12.71□□□□□ -0.37
RFC1-210ENST00000505077 CCDC136Q96JN2 1154 aa12.71□□□□□ -0.37
RFC1-210ENST00000505077 TMX4Q9H1E5 349 aaPredicted RBP12.71□□□□□ -0.37
RFC1-210ENST00000505077 DCTPP1Q9H773 170 aa12.71□□□□□ -0.37
RFC1-210ENST00000505077 PIM2Q9P1W9 311 aa12.71□□□□□ -0.37
RFC1-210ENST00000505077 DUOX1Q9NRD9 1551 aa12.71□□□□□ -0.37
RFC1-210ENST00000505077 MYH7P12883 1935 aa12.7□□□□□ -0.38
RFC1-210ENST00000505077 PPEF1O14829 653 aaPredicted RBP12.7□□□□□ -0.38
RFC1-210ENST00000505077 SURF6O75683 361 aaKnown RBP12.7□□□□□ -0.38
RFC1-210ENST00000505077 DPEP1P16444 411 aa12.7□□□□□ -0.38
RFC1-210ENST00000505077 G3BP1Q13283 466 aaKnown RBP eCLIP12.7□□□□□ -0.38
RFC1-210ENST00000505077 SOGA3Q5TF21 947 aa12.7□□□□□ -0.38
RFC1-210ENST00000505077 CC2D2BQ6DHV5 1058 aa12.7□□□□□ -0.38
RFC1-210ENST00000505077 PRPF40BQ6NWY9 871 aaKnown RBP12.7□□□□□ -0.38
RFC1-210ENST00000505077 SMC5Q8IY18 1101 aa12.7□□□□□ -0.38
RFC1-210ENST00000505077 ZNF622Q969S3 477 aaKnown RBP eCLIP12.7□□□□□ -0.38
RFC1-210ENST00000505077 FHDC1Q9C0D6 1143 aaPredicted RBP12.7□□□□□ -0.38
RFC1-210ENST00000505077 CNNM1Q9NRU3 951 aa12.7□□□□□ -0.38
RFC1-210ENST00000505077 ATP6V0A2Q9Y487 856 aa12.7□□□□□ -0.38
RFC1-210ENST00000505077 KCNA3P22001 575 aa12.69□□□□□ -0.38
RFC1-210ENST00000505077 OS9Q13438 667 aaPredicted RBP12.69□□□□□ -0.38
RFC1-210ENST00000505077 CENPQQ7L2Z9 268 aaPredicted RBP12.69□□□□□ -0.38
RFC1-210ENST00000505077 SP8Q8IXZ3 490 aa12.69□□□□□ -0.38
RFC1-210ENST00000505077 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
RFC1-210ENST00000505077 KIF1BPQ96EK5 621 aa12.69□□□□□ -0.38
RFC1-210ENST00000505077 ANKRD2Q9GZV1 360 aa12.69□□□□□ -0.38
RFC1-210ENST00000505077 XDHP47989 1333 aa12.68□□□□□ -0.38
RFC1-210ENST00000505077 KDM2BQ8NHM5 1336 aa12.68□□□□□ -0.38
RFC1-210ENST00000505077 A0A0G2JLW4 131 aa12.68□□□□□ -0.38
RFC1-210ENST00000505077 DALRD3Q5D0E6 543 aaKnown RBP12.68□□□□□ -0.38
RFC1-210ENST00000505077 ATG9AQ7Z3C6 839 aa12.68□□□□□ -0.38
RFC1-210ENST00000505077 ZNF594Q96JF6 807 aaPredicted RBP12.68□□□□□ -0.38
RFC1-210ENST00000505077 SYT17Q9BSW7 474 aa12.68□□□□□ -0.38
RFC1-210ENST00000505077 SIL1Q9H173 461 aa12.68□□□□□ -0.38
RFC1-210ENST00000505077 PA2G4Q9UQ80 394 aaKnown RBP12.68□□□□□ -0.38
RFC1-210ENST00000505077 EXOC6BQ9Y2D4 811 aa12.68□□□□□ -0.38
RFC1-210ENST00000505077 RIPOR2Q9Y4F9 1068 aa12.68□□□□□ -0.38
RFC1-210ENST00000505077 ZNF609O15014 1411 aa12.68□□□□□ -0.38
RFC1-210ENST00000505077 SNED1Q8TER0 1413 aa12.68□□□□□ -0.38
RFC1-210ENST00000505077 AKAP11Q9UKA4 1901 aa12.68□□□□□ -0.38
RFC1-210ENST00000505077 KLHDC4Q8TBB5 520 aa12.67□□□□□ -0.38
RFC1-210ENST00000505077 LRRCC1Q9C099 1032 aa12.67□□□□□ -0.38
RFC1-210ENST00000505077 GPR108Q9NPR9 543 aa12.67□□□□□ -0.38
RFC1-210ENST00000505077 PODXL2Q9NZ53 605 aa12.67□□□□□ -0.38
RFC1-210ENST00000505077 TIAM2Q8IVF5 1701 aa12.67□□□□□ -0.38
RFC1-210ENST00000505077 PDE8BO95263 885 aa12.66□□□□□ -0.38
RFC1-210ENST00000505077 CHRNDQ07001 517 aa12.66□□□□□ -0.38
RFC1-210ENST00000505077 PUM3Q15397 648 aaKnown RBP12.66□□□□□ -0.38
RFC1-210ENST00000505077 LRRC24Q50LG9 513 aa12.66□□□□□ -0.38
RFC1-210ENST00000505077 METTL24Q5JXM2 366 aa12.66□□□□□ -0.38
RFC1-210ENST00000505077 IFNLR1Q8IU57 520 aaPredicted RBP12.66□□□□□ -0.38
RFC1-210ENST00000505077 VGLL2Q8N8G2 317 aa12.66□□□□□ -0.38
RFC1-210ENST00000505077 NLGN2Q8NFZ4 835 aa12.66□□□□□ -0.38
RFC1-210ENST00000505077 CEP126Q9P2H0 1117 aa12.66□□□□□ -0.38
RFC1-210ENST00000505077 ZBTB47Q9UFB7 747 aaPredicted RBP12.66□□□□□ -0.38
RFC1-210ENST00000505077 MINPP1Q9UNW1 487 aa12.66□□□□□ -0.38
RFC1-210ENST00000505077 AKAP2Q9Y2D5 859 aa12.66□□□□□ -0.38
RFC1-210ENST00000505077 ZNF646O15015 1829 aaPredicted RBP12.66□□□□□ -0.38
RFC1-210ENST00000505077 DOCK2Q92608 1830 aa12.65□□□□□ -0.38
RFC1-210ENST00000505077 IGHDP01880 384 aa12.65□□□□□ -0.38
RFC1-210ENST00000505077 CCDC93Q567U6 631 aa12.65□□□□□ -0.38
RFC1-210ENST00000505077 RTKN2Q8IZC4 609 aa12.65□□□□□ -0.38
RFC1-210ENST00000505077 RHPN1Q8TCX5 695 aa12.65□□□□□ -0.38
RFC1-210ENST00000505077 C7orf43Q8WVR3 580 aa12.65□□□□□ -0.38
RFC1-210ENST00000505077 PUS3Q9BZE2 481 aaKnown RBP12.65□□□□□ -0.38
RFC1-210ENST00000505077 LEMD3Q9Y2U8 911 aa12.65□□□□□ -0.38
RFC1-210ENST00000505077 GTF3C3Q9Y5Q9 886 aa12.65□□□□□ -0.38
RFC1-210ENST00000505077 SASH1O94885 1247 aa12.64□□□□□ -0.39
RFC1-210ENST00000505077 UBE4AQ14139 1066 aa12.64□□□□□ -0.39
RFC1-210ENST00000505077 CLASRPQ8N2M8 674 aaKnown RBP12.64□□□□□ -0.39
RFC1-210ENST00000505077 ANKIB1Q9P2G1 1089 aa12.64□□□□□ -0.39
RFC1-210ENST00000505077 MED23Q9ULK4 1368 aa12.64□□□□□ -0.39
RFC1-210ENST00000505077 MAST2Q6P0Q8 1798 aa12.64□□□□□ -0.39
RFC1-210ENST00000505077 NUCB1Q02818 461 aa12.63□□□□□ -0.39
RFC1-210ENST00000505077 TFCP2Q12800 502 aa12.63□□□□□ -0.39
RFC1-210ENST00000505077 ATP2B3Q16720 1220 aa12.63□□□□□ -0.39
RFC1-210ENST00000505077 MPNDQ8N594 471 aa12.63□□□□□ -0.39
RFC1-210ENST00000505077 SUPT20HQ8NEM7 779 aa12.63□□□□□ -0.39
RFC1-210ENST00000505077 LPIN2Q92539 896 aa12.63□□□□□ -0.39
RFC1-210ENST00000505077 PSMD1Q99460 953 aa12.63□□□□□ -0.39
RFC1-210ENST00000505077 RTFDC1Q9BY42 306 aaPredicted RBP12.63□□□□□ -0.39
RFC1-210ENST00000505077 MYO5AQ9Y4I1 1855 aaKnown RBP12.63□□□□□ -0.39
RFC1-210ENST00000505077 SCN9AQ15858 1988 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms