RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 EYA2O00167 538 aa17.33■□□□□ 0.36
DDR1-253ENST00000504651 LRRC24Q50LG9 513 aa17.33■□□□□ 0.36
DDR1-253ENST00000504651 OLFM4Q6UX06 510 aa17.33■□□□□ 0.36
DDR1-253ENST00000504651 PUS3Q9BZE2 481 aaKnown RBP17.33■□□□□ 0.36
DDR1-253ENST00000504651 SNED1Q8TER0 1413 aa17.32■□□□□ 0.36
DDR1-253ENST00000504651 CIAO1O76071 339 aa17.32■□□□□ 0.36
DDR1-253ENST00000504651 OS9Q13438 667 aaPredicted RBP17.32■□□□□ 0.36
DDR1-253ENST00000504651 CC2D2BQ6DHV5 1058 aa17.32■□□□□ 0.36
DDR1-253ENST00000504651 C7orf43Q8WVR3 580 aa17.32■□□□□ 0.36
DDR1-253ENST00000504651 FBXO3Q9UK99 471 aa17.32■□□□□ 0.36
DDR1-253ENST00000504651 MROH5Q6ZUA9 1318 aa17.31■□□□□ 0.36
DDR1-253ENST00000504651 SURF6O75683 361 aaKnown RBP17.31■□□□□ 0.36
DDR1-253ENST00000504651 YBX3P16989 372 aaKnown RBP eCLIP17.31■□□□□ 0.36
DDR1-253ENST00000504651 CHRNDQ07001 517 aa17.31■□□□□ 0.36
DDR1-253ENST00000504651 G3BP1Q13283 466 aaKnown RBP eCLIP17.31■□□□□ 0.36
DDR1-253ENST00000504651 GPR162Q16538 588 aa17.31■□□□□ 0.36
DDR1-253ENST00000504651 MINPP1Q9UNW1 487 aa17.31■□□□□ 0.36
DDR1-253ENST00000504651 XDHP47989 1333 aa17.3■□□□□ 0.36
DDR1-253ENST00000504651 IL15P40933 162 aaPredicted RBP17.3■□□□□ 0.36
DDR1-253ENST00000504651 GPSM2P81274 684 aa17.3■□□□□ 0.36
DDR1-253ENST00000504651 METTL24Q5JXM2 366 aa17.3■□□□□ 0.36
DDR1-253ENST00000504651 MPNDQ8N594 471 aa17.3■□□□□ 0.36
DDR1-253ENST00000504651 ANKRD2Q9GZV1 360 aa17.3■□□□□ 0.36
DDR1-253ENST00000504651 ANKIB1Q9P2G1 1089 aa17.3■□□□□ 0.36
DDR1-253ENST00000504651 EXOC6BQ9Y2D4 811 aa17.3■□□□□ 0.36
DDR1-253ENST00000504651 RIPOR2Q9Y4F9 1068 aa17.3■□□□□ 0.36
DDR1-253ENST00000504651 ARAP2Q8WZ64 1704 aa17.3■□□□□ 0.36
DDR1-253ENST00000504651 GRIPAP1Q4V328 841 aa17.29■□□□□ 0.36
DDR1-253ENST00000504651 DPP8Q6V1X1 898 aaPredicted RBP17.29■□□□□ 0.36
DDR1-253ENST00000504651 ATG9AQ7Z3C6 839 aa17.29■□□□□ 0.36
DDR1-253ENST00000504651 RTKN2Q8IZC4 609 aa17.29■□□□□ 0.36
DDR1-253ENST00000504651 NSFL1CQ9UNZ2 370 aaKnown RBP17.29■□□□□ 0.36
DDR1-253ENST00000504651 NOP58Q9Y2X3 529 aaKnown RBP17.29■□□□□ 0.36
DDR1-253ENST00000504651 HDAC1Q13547 482 aaPredicted RBP17.28■□□□□ 0.36
DDR1-253ENST00000504651 HSP90AB4PQ58FF6 505 aa17.28■□□□□ 0.36
DDR1-253ENST00000504651 HELBQ8NG08 1087 aaPredicted RBP17.28■□□□□ 0.36
DDR1-253ENST00000504651 TAF5LO75529 589 aa17.27■□□□□ 0.36
DDR1-253ENST00000504651 UFL1O94874 794 aa17.27■□□□□ 0.36
DDR1-253ENST00000504651 KCNJ4P48050 445 aa17.27■□□□□ 0.36
DDR1-253ENST00000504651 FKBP4Q02790 459 aaKnown RBP eCLIP17.27■□□□□ 0.36
DDR1-253ENST00000504651 ERC1Q8IUD2 1116 aa17.27■□□□□ 0.36
DDR1-253ENST00000504651 RWDD1Q9H446 243 aaPredicted RBP17.27■□□□□ 0.36
DDR1-253ENST00000504651 PODXL2Q9NZ53 605 aa17.27■□□□□ 0.36
DDR1-253ENST00000504651 GGA1Q9UJY5 639 aa17.27■□□□□ 0.36
DDR1-253ENST00000504651 CCDC88AQ3V6T2 1871 aa17.27■□□□□ 0.35
DDR1-253ENST00000504651 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
DDR1-253ENST00000504651 C6orf229H3BNL8 230 aa17.26■□□□□ 0.35
DDR1-253ENST00000504651 APBB1O00213 710 aa17.26■□□□□ 0.35
DDR1-253ENST00000504651 NFKBIEO00221 500 aa17.26■□□□□ 0.35
DDR1-253ENST00000504651 ATP2B4P23634 1241 aa17.26■□□□□ 0.35
DDR1-253ENST00000504651 RASSF7Q02833 373 aa17.26■□□□□ 0.35
DDR1-253ENST00000504651 ARHGAP27Q6ZUM4 889 aa17.26■□□□□ 0.35
DDR1-253ENST00000504651 VGLL2Q8N8G2 317 aa17.26■□□□□ 0.35
DDR1-253ENST00000504651 SUPT20HQ8NEM7 779 aa17.26■□□□□ 0.35
DDR1-253ENST00000504651 TAOK3Q9H2K8 898 aa17.26■□□□□ 0.35
DDR1-253ENST00000504651 CEP126Q9P2H0 1117 aa17.26■□□□□ 0.35
DDR1-253ENST00000504651 ZNF609O15014 1411 aa17.26■□□□□ 0.35
DDR1-253ENST00000504651 TIAM2Q8IVF5 1701 aa17.26■□□□□ 0.35
DDR1-253ENST00000504651 LTBP3Q9NS15 1303 aa17.25■□□□□ 0.35
DDR1-253ENST00000504651 GRIN3BO60391 1043 aa17.25■□□□□ 0.35
DDR1-253ENST00000504651 PDE8BO95263 885 aa17.25■□□□□ 0.35
DDR1-253ENST00000504651 TFCP2Q12800 502 aa17.25■□□□□ 0.35
DDR1-253ENST00000504651 TBC1D16Q8TBP0 767 aa17.25■□□□□ 0.35
DDR1-253ENST00000504651 PSMD1Q99460 953 aa17.25■□□□□ 0.35
DDR1-253ENST00000504651 LEMD3Q9Y2U8 911 aa17.25■□□□□ 0.35
DDR1-253ENST00000504651 ZNF804BA4D1E1 1349 aa17.24■□□□□ 0.35
DDR1-253ENST00000504651 RAB11FIP3O75154 756 aa17.24■□□□□ 0.35
DDR1-253ENST00000504651 SASH1O94885 1247 aa17.24■□□□□ 0.35
DDR1-253ENST00000504651 PUM3Q15397 648 aaKnown RBP17.24■□□□□ 0.35
DDR1-253ENST00000504651 ERICH6BQ5W0A0 696 aa17.24■□□□□ 0.35
DDR1-253ENST00000504651 GPR101Q96P66 508 aaPredicted RBP17.24■□□□□ 0.35
DDR1-253ENST00000504651 EYA3Q99504 573 aa17.24■□□□□ 0.35
DDR1-253ENST00000504651 RTFDC1Q9BY42 306 aaPredicted RBP17.24■□□□□ 0.35
DDR1-253ENST00000504651 DCTPP1Q9H773 170 aa17.24■□□□□ 0.35
DDR1-253ENST00000504651 SBF1O95248 1867 aa17.24■□□□□ 0.35
DDR1-253ENST00000504651 DICER1Q9UPY3 1922 aaKnown RBP17.23■□□□□ 0.35
DDR1-253ENST00000504651 UBE4AQ14139 1066 aa17.23■□□□□ 0.35
DDR1-253ENST00000504651 ATP2B3Q16720 1220 aa17.23■□□□□ 0.35
DDR1-253ENST00000504651 GCC1Q96CN9 775 aa17.23■□□□□ 0.35
DDR1-253ENST00000504651 KIF1BPQ96EK5 621 aa17.23■□□□□ 0.35
DDR1-253ENST00000504651 POLLQ9UGP5 575 aa17.23■□□□□ 0.35
DDR1-253ENST00000504651 MED23Q9ULK4 1368 aa17.23■□□□□ 0.35
DDR1-253ENST00000504651 SNAP23O00161 211 aa17.22■□□□□ 0.35
DDR1-253ENST00000504651 IGHDP01880 384 aa17.22■□□□□ 0.35
DDR1-253ENST00000504651 SLC5A1P13866 664 aa17.22■□□□□ 0.35
DDR1-253ENST00000504651 RHPN1Q8TCX5 695 aa17.22■□□□□ 0.35
DDR1-253ENST00000504651 ZNF277Q9NRM2 450 aaPredicted RBP17.22■□□□□ 0.35
DDR1-253ENST00000504651 AKAP2Q9Y2D5 859 aa17.22■□□□□ 0.35
DDR1-253ENST00000504651 MYH13Q9UKX3 1938 aa17.21■□□□□ 0.35
DDR1-253ENST00000504651 PPIP5K2O43314 1243 aa17.21■□□□□ 0.35
DDR1-253ENST00000504651 IFIT1P09914 478 aaKnown RBP17.21■□□□□ 0.35
DDR1-253ENST00000504651 AOC3Q16853 763 aa17.21■□□□□ 0.35
DDR1-253ENST00000504651 WASHC4Q2M389 1173 aa17.21■□□□□ 0.35
DDR1-253ENST00000504651 LRRCC1Q9C099 1032 aa17.21■□□□□ 0.35
DDR1-253ENST00000504651 IL1RAPL2Q9NP60 686 aa17.21■□□□□ 0.35
DDR1-253ENST00000504651 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.21■□□□□ 0.35
DDR1-253ENST00000504651 A0A1B0GUL7 405 aa17.2■□□□□ 0.34
DDR1-253ENST00000504651 WTIPA6NIX2 430 aaPredicted RBP17.2■□□□□ 0.34
DDR1-253ENST00000504651 RIMBP2O15034 1052 aa17.2■□□□□ 0.34
DDR1-253ENST00000504651 FGFR2P21802 821 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms