RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 A1BGP04217 495 aa8.5□□□□□ -1.05
SNX25-202ENST00000504273 IFIT2P09913 472 aaKnown RBP8.5□□□□□ -1.05
SNX25-202ENST00000504273 MCM2P49736 904 aa8.5□□□□□ -1.05
SNX25-202ENST00000504273 SKOR2Q2VWA4 1001 aaPredicted RBP8.5□□□□□ -1.05
SNX25-202ENST00000504273 EDC3Q96F86 508 aaKnown RBP8.5□□□□□ -1.05
SNX25-202ENST00000504273 GRPEL1Q9HAV7 217 aa8.5□□□□□ -1.05
SNX25-202ENST00000504273 WNK3Q9BYP7 1800 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 PCDH11XQ9BZA7 1347 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 PCDH11YQ9BZA8 1340 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 A0A0D9SFI3 127 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 MCCP23508 829 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 AK2P54819 239 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 NMIQ13287 307 aaPredicted RBP8.49□□□□□ -1.05
SNX25-202ENST00000504273 UBE3BQ7Z3V4 1068 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 TTC5Q8N0Z6 440 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 EVI5LQ96CN4 794 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 CARD10Q9BWT7 1032 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 DBNLQ9UJU6 430 aaKnown RBP8.49□□□□□ -1.05
SNX25-202ENST00000504273 MED23Q9ULK4 1368 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 ERVV-2B6SEH9 535 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 DTNBO60941 627 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 TFCP2Q12800 502 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 G3BP1Q13283 466 aaKnown RBP eCLIP8.49□□□□□ -1.05
SNX25-202ENST00000504273 ZC3H4Q9UPT8 1303 aaKnown RBP8.49□□□□□ -1.05
SNX25-202ENST00000504273 TOM1L2Q6ZVM7 507 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 BOLA2Q9H3K6 86 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 CEP350Q5VT06 3117 aa8.49□□□□□ -1.05
SNX25-202ENST00000504273 FOXN1O15353 648 aa8.48□□□□□ -1.05
SNX25-202ENST00000504273 NEXNQ0ZGT2 675 aa8.48□□□□□ -1.05
SNX25-202ENST00000504273 FOXD4L5Q5VV16 416 aaPredicted RBP8.48□□□□□ -1.05
SNX25-202ENST00000504273 ATG9AQ7Z3C6 839 aa8.48□□□□□ -1.05
SNX25-202ENST00000504273 FLAD1Q8NFF5 587 aa8.48□□□□□ -1.05
SNX25-202ENST00000504273 FOXD4L4Q8WXT5 416 aaPredicted RBP8.48□□□□□ -1.05
SNX25-202ENST00000504273 MAP4K1Q92918 833 aa8.48□□□□□ -1.05
SNX25-202ENST00000504273 RRAGDQ9NQL2 400 aaPredicted RBP8.48□□□□□ -1.05
SNX25-202ENST00000504273 NDUFB9Q9Y6M9 179 aa8.48□□□□□ -1.05
SNX25-202ENST00000504273 A0A087WZG4 1122 aa8.48□□□□□ -1.05
SNX25-202ENST00000504273 MRE11P49959 708 aa8.48□□□□□ -1.05
SNX25-202ENST00000504273 TNNI3KQ59H18 835 aa8.48□□□□□ -1.05
SNX25-202ENST00000504273 ZNF589Q86UQ0 364 aaPredicted RBP8.48□□□□□ -1.05
SNX25-202ENST00000504273 ZSWIM6Q9HCJ5 1215 aa8.48□□□□□ -1.05
SNX25-202ENST00000504273 HDAC5Q9UQL6 1122 aa8.48□□□□□ -1.05
SNX25-202ENST00000504273 FPGT-TNNI3KV9GXZ4 949 aa8.48□□□□□ -1.05
SNX25-202ENST00000504273 CCDC171Q6TFL3 1326 aa8.48□□□□□ -1.05
SNX25-202ENST00000504273 PRPF40AO75400 957 aaKnown RBP8.47□□□□□ -1.05
SNX25-202ENST00000504273 IL2RBP14784 551 aa8.47□□□□□ -1.05
SNX25-202ENST00000504273 RBM27Q9P2N5 1060 aaKnown RBP8.47□□□□□ -1.05
SNX25-202ENST00000504273 ERBB4Q15303 1308 aa8.47□□□□□ -1.05
SNX25-202ENST00000504273 PNPLA7Q6ZV29 1317 aa8.47□□□□□ -1.05
SNX25-202ENST00000504273 PTMSP20962 102 aa8.47□□□□□ -1.05
SNX25-202ENST00000504273 PRPF40BQ6NWY9 871 aaKnown RBP8.47□□□□□ -1.05
SNX25-202ENST00000504273 DDX54Q8TDD1 881 aaKnown RBP8.47□□□□□ -1.05
SNX25-202ENST00000504273 NMRK2Q9NPI5 230 aa8.47□□□□□ -1.05
SNX25-202ENST00000504273 DIAPH3Q9NSV4 1193 aa8.47□□□□□ -1.05
SNX25-202ENST00000504273 ZNF609O15014 1411 aa8.47□□□□□ -1.05
SNX25-202ENST00000504273 ATP5JP18859 108 aa8.47□□□□□ -1.05
SNX25-202ENST00000504273 DDX49Q9Y6V7 483 aaKnown RBP8.47□□□□□ -1.05
SNX25-202ENST00000504273 ANKRD36CQ5JPF3 1778 aa8.46□□□□□ -1.05
SNX25-202ENST00000504273 ZNF445P59923 1031 aa8.46□□□□□ -1.05
SNX25-202ENST00000504273 HTRA3P83110 453 aa8.46□□□□□ -1.05
SNX25-202ENST00000504273 ZSCAN23Q3MJ62 389 aa8.46□□□□□ -1.05
SNX25-202ENST00000504273 CREB3L3Q68CJ9 461 aa8.46□□□□□ -1.05
SNX25-202ENST00000504273 LMBR1LQ6UX01 489 aa8.46□□□□□ -1.05
SNX25-202ENST00000504273 DBNDD2Q9BQY9 259 aa8.46□□□□□ -1.05
SNX25-202ENST00000504273 TM6SF1Q9BZW5 370 aa8.46□□□□□ -1.05
SNX25-202ENST00000504273 CREBZFQ9NS37 354 aa8.46□□□□□ -1.05
SNX25-202ENST00000504273 TMEM63CQ9P1W3 806 aa8.46□□□□□ -1.05
SNX25-202ENST00000504273 RBM8AQ9Y5S9 174 aaKnown RBP8.46□□□□□ -1.05
SNX25-202ENST00000504273 CCDC85CA6NKD9 419 aa8.46□□□□□ -1.06
SNX25-202ENST00000504273 SLC27A2O14975 620 aa8.46□□□□□ -1.06
SNX25-202ENST00000504273 CASTP20810 708 aaKnown RBP8.46□□□□□ -1.06
SNX25-202ENST00000504273 SLFNL1Q499Z3 407 aa8.46□□□□□ -1.06
SNX25-202ENST00000504273 SLC4A9Q96Q91 983 aa8.46□□□□□ -1.06
SNX25-202ENST00000504273 ISY1Q9ULR0 285 aaKnown RBP8.46□□□□□ -1.06
SNX25-202ENST00000504273 NUP98P52948 1817 aa8.45□□□□□ -1.06
SNX25-202ENST00000504273 TAF5LO75529 589 aa8.45□□□□□ -1.06
SNX25-202ENST00000504273 ZNF827Q17R98 1081 aa8.45□□□□□ -1.06
SNX25-202ENST00000504273 CAVIN1Q6NZI2 390 aaKnown RBP8.45□□□□□ -1.06
SNX25-202ENST00000504273 FAM43AQ8N2R8 423 aa8.45□□□□□ -1.06
SNX25-202ENST00000504273 GPATCH3Q96I76 525 aa8.45□□□□□ -1.06
SNX25-202ENST00000504273 LIMCH1Q9UPQ0 1083 aa8.45□□□□□ -1.06
SNX25-202ENST00000504273 GADD45BO75293 160 aaPredicted RBP8.45□□□□□ -1.06
SNX25-202ENST00000504273 LRRC24Q50LG9 513 aa8.45□□□□□ -1.06
SNX25-202ENST00000504273 VPS53Q5VIR6 699 aa8.45□□□□□ -1.06
SNX25-202ENST00000504273 USPL1Q5W0Q7 1092 aa8.45□□□□□ -1.06
SNX25-202ENST00000504273 RUFY2Q8WXA3 655 aa8.45□□□□□ -1.06
SNX25-202ENST00000504273 PIGBQ92521 554 aa8.45□□□□□ -1.06
SNX25-202ENST00000504273 JAKMIP1Q96N16 626 aaKnown RBP8.45□□□□□ -1.06
SNX25-202ENST00000504273 SEC62Q99442 399 aaKnown RBP8.45□□□□□ -1.06
SNX25-202ENST00000504273 ISCA1Q9BUE6 129 aa8.45□□□□□ -1.06
SNX25-202ENST00000504273 ZBTB3Q9H5J0 574 aa8.45□□□□□ -1.06
SNX25-202ENST00000504273 ASAP1Q9ULH1 1129 aa8.45□□□□□ -1.06
SNX25-202ENST00000504273 ME3Q16798 604 aa8.44□□□□□ -1.06
SNX25-202ENST00000504273 KIAA1211Q6ZU35 1233 aa8.44□□□□□ -1.06
SNX25-202ENST00000504273 ZNF594Q96JF6 807 aaPredicted RBP8.44□□□□□ -1.06
SNX25-202ENST00000504273 HAUS7Q99871 368 aa8.44□□□□□ -1.06
SNX25-202ENST00000504273 TPCN1Q9ULQ1 816 aa8.44□□□□□ -1.06
SNX25-202ENST00000504273 MYO5AQ9Y4I1 1855 aaKnown RBP8.44□□□□□ -1.06
SNX25-202ENST00000504273 MARCH10Q8NA82 808 aaPredicted RBP8.44□□□□□ -1.06
SNX25-202ENST00000504273 ARID3AQ99856 593 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms