RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 CAMTA2O94983 1202 aa11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 NASPP49321 788 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 RRP1P56182 461 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 SUFUQ9UMX1 484 aa11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 MRVI1Q9Y6F6 885 aa11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 PXDNLA1KZ92 1463 aa11.49□□□□□ -0.57
PDLIM5-207ENST00000503974 BCAR3O75815 825 aa11.49□□□□□ -0.57
PDLIM5-207ENST00000503974 ARHGAP45Q92619 1136 aa11.49□□□□□ -0.57
PDLIM5-207ENST00000503974 RASSF4Q9H2L5 321 aa11.49□□□□□ -0.57
PDLIM5-207ENST00000503974 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
PDLIM5-207ENST00000503974 DDX11L8A8MPP1 907 aa11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 PPP1R12AO14974 1030 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 MTA1Q13330 715 aa11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 ZC3H12AQ5D1E8 599 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 PLBD2Q8NHP8 589 aa11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 ANKRD7Q92527 254 aa11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 BCL2L12Q9HB09 334 aa11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 KLHL33A6NCF5 533 aa11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 CLEC4GQ6UXB4 293 aa11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 KIF6Q6ZMV9 814 aa11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 ANKRD23Q86SG2 305 aa11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 CREBRFQ8IUR6 639 aa11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 CXorf56Q9H5V9 222 aa11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 TBC1D2BQ9UPU7 963 aa11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 ZNF330Q9Y3S2 320 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 IBTKQ9P2D0 1353 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-207ENST00000503974 DDX58O95786 925 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 GYS1P13807 737 aa11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 RFC4P35249 363 aa11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 RAD51AP2Q09MP3 1159 aa11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 AIMP1Q12904 312 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 C11orf91Q3C1V1 193 aa11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 SWT1Q5T5J6 900 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 KSR2Q6VAB6 950 aa11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 DNAJC14Q6Y2X3 702 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 GIGYF2Q6Y7W6 1299 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 ANKRD13DQ6ZTN6 518 aa11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 SKAP1Q86WV1 359 aa11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 SLC16A10Q8TF71 515 aa11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 PDLIM2Q96JY6 352 aa11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 SRP68Q9UHB9 627 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 FKBP5Q13451 457 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 LRCH2Q5VUJ6 765 aa11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 USPL1Q5W0Q7 1092 aa11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 TRERF1Q96PN7 1200 aa11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 TMX1Q9H3N1 280 aa11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 NOB1Q9ULX3 412 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-207ENST00000503974 NRXN2Q9P2S2 1712 aa11.46□□□□□ -0.57
PDLIM5-207ENST00000503974 PI4KAP2A4QPH2 592 aa11.46□□□□□ -0.57
PDLIM5-207ENST00000503974 MPHOSPH10O00566 681 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-207ENST00000503974 R3HDM1Q15032 1099 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-207ENST00000503974 HLFQ16534 295 aa11.46□□□□□ -0.57
PDLIM5-207ENST00000503974 TSHZ1Q6ZSZ6 1077 aa11.46□□□□□ -0.57
PDLIM5-207ENST00000503974 PI4KAP1Q8N8J0 262 aa11.46□□□□□ -0.57
PDLIM5-207ENST00000503974 ZBTB3Q9H5J0 574 aa11.46□□□□□ -0.57
PDLIM5-207ENST00000503974 ZPR1O75312 459 aa11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 GSCP56915 257 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 TNPO1Q92973 898 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 FAM210AQ96ND0 272 aa11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 METTL22Q9BUU2 404 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 API5Q9BZZ5 524 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 PDGFDQ9GZP0 370 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 ZNF652Q9Y2D9 606 aa11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 ABCC4O15439 1325 aa11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 AFDNP55196 1824 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 KIF3CO14782 793 aa11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 IPO8O15397 1037 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 TRIM27P14373 513 aa11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 ZKSCAN2Q63HK3 967 aa11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 ATF7IPQ6VMQ6 1270 aa11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 RINLQ6ZS11 566 aa11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 DNAAF4Q8WXU2 420 aa11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 MAP3K2Q9Y2U5 619 aa11.45□□□□□ -0.58
PDLIM5-207ENST00000503974 CALRP27797 417 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-207ENST00000503974 HNRNPH2P55795 449 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-207ENST00000503974 TRIM28Q13263 835 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-207ENST00000503974 BIRC2Q13490 618 aa11.44□□□□□ -0.58
PDLIM5-207ENST00000503974 RIC3Q7Z5B4 369 aa11.44□□□□□ -0.58
PDLIM5-207ENST00000503974 ZNF34Q8IZ26 560 aa11.44□□□□□ -0.58
PDLIM5-207ENST00000503974 NOL10Q9BSC4 688 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-207ENST00000503974 ISCA1Q9BUE6 129 aa11.44□□□□□ -0.58
PDLIM5-207ENST00000503974 MORC2Q9Y6X9 1032 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-207ENST00000503974 CASQ1P31415 396 aa11.44□□□□□ -0.58
PDLIM5-207ENST00000503974 TCIRG1Q13488 830 aa11.44□□□□□ -0.58
PDLIM5-207ENST00000503974 NLGN1Q8N2Q7 840 aa11.44□□□□□ -0.58
PDLIM5-207ENST00000503974 JMYQ8N9B5 988 aa11.44□□□□□ -0.58
PDLIM5-207ENST00000503974 UBN2Q6ZU65 1347 aa11.43□□□□□ -0.58
PDLIM5-207ENST00000503974 F6X3S4 739 aa11.43□□□□□ -0.58
PDLIM5-207ENST00000503974 TNNT1P13805 278 aa11.43□□□□□ -0.58
PDLIM5-207ENST00000503974 TM4SF1P30408 202 aa11.43□□□□□ -0.58
PDLIM5-207ENST00000503974 BEND3Q5T5X7 828 aa11.43□□□□□ -0.58
PDLIM5-207ENST00000503974 NBPF3Q9H094 633 aa11.43□□□□□ -0.58
PDLIM5-207ENST00000503974 TOMM22Q9NS69 142 aa11.43□□□□□ -0.58
PDLIM5-207ENST00000503974 PSDA5PKW4 1024 aaPredicted RBP11.42□□□□□ -0.58
PDLIM5-207ENST00000503974 IGKV5-2P06315 115 aa11.42□□□□□ -0.58
PDLIM5-207ENST00000503974 SKOR2Q2VWA4 1001 aaPredicted RBP11.42□□□□□ -0.58
PDLIM5-207ENST00000503974 TBC1D9BQ66K14 1250 aa11.42□□□□□ -0.58
PDLIM5-207ENST00000503974 LINS1Q8NG48 757 aa11.42□□□□□ -0.58
PDLIM5-207ENST00000503974 MTFR1LQ9H019 292 aa11.42□□□□□ -0.58
PDLIM5-207ENST00000503974 CHMP5Q9NZZ3 219 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms