RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 LTBP1Q14766 1721 aa20.63■□□□□ 0.89
SCLT1-205ENST00000503401 LMNB1P20700 586 aa20.63■□□□□ 0.89
SCLT1-205ENST00000503401 PSMD1Q99460 953 aa20.63■□□□□ 0.89
SCLT1-205ENST00000503401 ANKIB1Q9P2G1 1089 aa20.63■□□□□ 0.89
SCLT1-205ENST00000503401 DICER1Q9UPY3 1922 aaKnown RBP20.63■□□□□ 0.89
SCLT1-205ENST00000503401 PUS3Q9BZE2 481 aaKnown RBP20.62■□□□□ 0.89
SCLT1-205ENST00000503401 DDX19BQ9UMR2 479 aa20.62■□□□□ 0.89
SCLT1-205ENST00000503401 A0A1B0GUL6 1792 aa20.62■□□□□ 0.89
SCLT1-205ENST00000503401 WTIPA6NIX2 430 aaPredicted RBP20.61■□□□□ 0.89
SCLT1-205ENST00000503401 RFX5P48382 616 aaPredicted RBP20.61■□□□□ 0.89
SCLT1-205ENST00000503401 LDHAL6AQ6ZMR3 332 aa20.61■□□□□ 0.89
SCLT1-205ENST00000503401 GPR101Q96P66 508 aaPredicted RBP20.61■□□□□ 0.89
SCLT1-205ENST00000503401 POLLQ9UGP5 575 aa20.61■□□□□ 0.89
SCLT1-205ENST00000503401 SUPT16HQ9Y5B9 1047 aaKnown RBP20.61■□□□□ 0.89
SCLT1-205ENST00000503401 TIAM2Q8IVF5 1701 aa20.61■□□□□ 0.89
SCLT1-205ENST00000503401 GRIPAP1Q4V328 841 aa20.6■□□□□ 0.89
SCLT1-205ENST00000503401 CNNM1Q9NRU3 951 aa20.6■□□□□ 0.89
SCLT1-205ENST00000503401 C6orf229H3BNL8 230 aa20.6■□□□□ 0.89
SCLT1-205ENST00000503401 SRGAP3O43295 1099 aa20.6■□□□□ 0.89
SCLT1-205ENST00000503401 IARSP41252 1262 aaKnown RBP20.6■□□□□ 0.89
SCLT1-205ENST00000503401 CHRNDQ07001 517 aa20.6■□□□□ 0.89
SCLT1-205ENST00000503401 HELBQ8NG08 1087 aaPredicted RBP20.6■□□□□ 0.89
SCLT1-205ENST00000503401 RTFDC1Q9BY42 306 aaPredicted RBP20.6■□□□□ 0.89
SCLT1-205ENST00000503401 COL4A5P29400 1685 aa20.59■□□□□ 0.89
SCLT1-205ENST00000503401 XDHP47989 1333 aa20.59■□□□□ 0.89
SCLT1-205ENST00000503401 PNMA6EA0A0J9YXQ4 647 aa20.59■□□□□ 0.89
SCLT1-205ENST00000503401 UFL1O94874 794 aa20.59■□□□□ 0.89
SCLT1-205ENST00000503401 PTPN12Q05209 780 aaKnown RBP20.59■□□□□ 0.89
SCLT1-205ENST00000503401 LRRC24Q50LG9 513 aa20.59■□□□□ 0.89
SCLT1-205ENST00000503401 TBC1D16Q8TBP0 767 aa20.59■□□□□ 0.89
SCLT1-205ENST00000503401 PA2G4Q9UQ80 394 aaKnown RBP20.59■□□□□ 0.89
SCLT1-205ENST00000503401 TAF5LO75529 589 aa20.58■□□□□ 0.89
SCLT1-205ENST00000503401 YY1P25490 414 aa20.58■□□□□ 0.89
SCLT1-205ENST00000503401 AOC3Q16853 763 aa20.58■□□□□ 0.89
SCLT1-205ENST00000503401 SIL1Q9H173 461 aa20.58■□□□□ 0.89
SCLT1-205ENST00000503401 ZBTB40Q9NUA8 1239 aa20.58■□□□□ 0.89
SCLT1-205ENST00000503401 PODXL2Q9NZ53 605 aa20.58■□□□□ 0.89
SCLT1-205ENST00000503401 GGA1Q9UJY5 639 aa20.58■□□□□ 0.89
SCLT1-205ENST00000503401 SNAP23O00161 211 aa20.57■□□□□ 0.88
SCLT1-205ENST00000503401 PPIP5K2O43314 1243 aa20.57■□□□□ 0.88
SCLT1-205ENST00000503401 MTX1Q13505 466 aa20.57■□□□□ 0.88
SCLT1-205ENST00000503401 SUPT20HQ8NEM7 779 aa20.57■□□□□ 0.88
SCLT1-205ENST00000503401 RIMBP2O15034 1052 aa20.56■□□□□ 0.88
SCLT1-205ENST00000503401 LARGE2Q8N3Y3 721 aa20.56■□□□□ 0.88
SCLT1-205ENST00000503401 RIPOR2Q9Y4F9 1068 aa20.56■□□□□ 0.88
SCLT1-205ENST00000503401 WASHC4Q2M389 1173 aa20.55■□□□□ 0.88
SCLT1-205ENST00000503401 CEP85Q6P2H3 762 aa20.55■□□□□ 0.88
SCLT1-205ENST00000503401 CRBNQ96SW2 442 aa20.55■□□□□ 0.88
SCLT1-205ENST00000503401 ANKRD2Q9GZV1 360 aa20.55■□□□□ 0.88
SCLT1-205ENST00000503401 ATP2B4P23634 1241 aa20.54■□□□□ 0.88
SCLT1-205ENST00000503401 ATP8B2P98198 1209 aa20.54■□□□□ 0.88
SCLT1-205ENST00000503401 EYA2O00167 538 aa20.53■□□□□ 0.88
SCLT1-205ENST00000503401 KIAA2012Q0VF49 1180 aa20.53■□□□□ 0.88
SCLT1-205ENST00000503401 ZNF804BA4D1E1 1349 aa20.53■□□□□ 0.88
SCLT1-205ENST00000503401 KLRK1P26718 216 aa20.53■□□□□ 0.88
SCLT1-205ENST00000503401 KCNJ4P48050 445 aa20.53■□□□□ 0.88
SCLT1-205ENST00000503401 METTL24Q5JXM2 366 aa20.53■□□□□ 0.88
SCLT1-205ENST00000503401 ATG9AQ7Z3C6 839 aa20.53■□□□□ 0.88
SCLT1-205ENST00000503401 JDP2Q8WYK2 163 aa20.53■□□□□ 0.88
SCLT1-205ENST00000503401 COPRSQ9NQ92 184 aa20.53■□□□□ 0.88
SCLT1-205ENST00000503401 MROH5Q6ZUA9 1318 aa20.52■□□□□ 0.88
SCLT1-205ENST00000503401 ZNF526Q8TF50 670 aaPredicted RBP20.52■□□□□ 0.88
SCLT1-205ENST00000503401 EYA3Q99504 573 aa20.52■□□□□ 0.88
SCLT1-205ENST00000503401 ZC3H12CQ9C0D7 883 aaKnown RBP20.52■□□□□ 0.88
SCLT1-205ENST00000503401 CHMP4BQ9H444 224 aaKnown RBP20.52■□□□□ 0.88
SCLT1-205ENST00000503401 DBNDD1Q9H9R9 158 aa20.52■□□□□ 0.88
SCLT1-205ENST00000503401 LEMD3Q9Y2U8 911 aa20.52■□□□□ 0.88
SCLT1-205ENST00000503401 POLA2Q14181 598 aa20.51■□□□□ 0.87
SCLT1-205ENST00000503401 DOK7Q18PE1 504 aa20.51■□□□□ 0.87
SCLT1-205ENST00000503401 TXNRD3Q86VQ6 643 aa20.51■□□□□ 0.87
SCLT1-205ENST00000503401 NIM1KQ8IY84 436 aa20.51■□□□□ 0.87
SCLT1-205ENST00000503401 SSH3Q8TE77 659 aa20.51■□□□□ 0.87
SCLT1-205ENST00000503401 VGLL2Q8N8G2 317 aa20.5■□□□□ 0.87
SCLT1-205ENST00000503401 VPS33BQ9H267 617 aa20.5■□□□□ 0.87
SCLT1-205ENST00000503401 ZNF541Q9H0D2 1346 aa20.5■□□□□ 0.87
SCLT1-205ENST00000503401 CIAO1O76071 339 aa20.49■□□□□ 0.87
SCLT1-205ENST00000503401 IRX6P78412 446 aaPredicted RBP20.49■□□□□ 0.87
SCLT1-205ENST00000503401 SIRT2Q8IXJ6 389 aa20.49■□□□□ 0.87
SCLT1-205ENST00000503401 ZC3H4Q9UPT8 1303 aaKnown RBP20.48■□□□□ 0.87
SCLT1-205ENST00000503401 MED23Q9ULK4 1368 aa20.48■□□□□ 0.87
SCLT1-205ENST00000503401 SCN9AQ15858 1988 aa20.48■□□□□ 0.87
SCLT1-205ENST00000503401 YDJCA8MPS7 323 aa20.48■□□□□ 0.87
SCLT1-205ENST00000503401 FZD9O00144 591 aa20.48■□□□□ 0.87
SCLT1-205ENST00000503401 PDE8BO95263 885 aa20.48■□□□□ 0.87
SCLT1-205ENST00000503401 FBXO3Q9UK99 471 aa20.48■□□□□ 0.87
SCLT1-205ENST00000503401 ECE2O60344 883 aa20.47■□□□□ 0.87
SCLT1-205ENST00000503401 IL15P40933 162 aaPredicted RBP20.47■□□□□ 0.87
SCLT1-205ENST00000503401 ZNRF3Q9ULT6 936 aa20.47■□□□□ 0.87
SCLT1-205ENST00000503401 G3V3G9 751 aa20.46■□□□□ 0.87
SCLT1-205ENST00000503401 SURF6O75683 361 aaKnown RBP20.46■□□□□ 0.87
SCLT1-205ENST00000503401 DCAF8Q5TAQ9 597 aa20.46■□□□□ 0.87
SCLT1-205ENST00000503401 RPAP2Q8IXW5 612 aaPredicted RBP20.46■□□□□ 0.87
SCLT1-205ENST00000503401 KCNQ5Q9NR82 932 aa20.46■□□□□ 0.87
SCLT1-205ENST00000503401 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.46■□□□□ 0.87
SCLT1-205ENST00000503401 IRS2Q9Y4H2 1338 aa20.46■□□□□ 0.87
SCLT1-205ENST00000503401 DDNO94850 711 aaPredicted RBP20.45■□□□□ 0.87
SCLT1-205ENST00000503401 G3BP1Q13283 466 aaKnown RBP eCLIP20.45■□□□□ 0.87
SCLT1-205ENST00000503401 UBE4AQ14139 1066 aa20.45■□□□□ 0.87
SCLT1-205ENST00000503401 ZNF784Q8NCA9 323 aaPredicted RBP20.45■□□□□ 0.87
SCLT1-205ENST00000503401 CEP126Q9P2H0 1117 aa20.45■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms