RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 G3V3G9 751 aa13.84□□□□□ -0.19
SNCA-207ENST00000502987 ZNF853P0CG23 659 aa13.84□□□□□ -0.19
SNCA-207ENST00000502987 HSP90B1P14625 803 aaKnown RBP13.84□□□□□ -0.19
SNCA-207ENST00000502987 SF3B3Q15393 1217 aaKnown RBP13.84□□□□□ -0.19
SNCA-207ENST00000502987 DCAF8Q5TAQ9 597 aa13.84□□□□□ -0.19
SNCA-207ENST00000502987 CELF1Q92879 486 aaKnown RBP13.84□□□□□ -0.19
SNCA-207ENST00000502987 TRPM7Q96QT4 1865 aa13.84□□□□□ -0.19
SNCA-207ENST00000502987 H7C1D1 291 aa13.83□□□□□ -0.2
SNCA-207ENST00000502987 DDX58O95786 925 aaKnown RBP13.83□□□□□ -0.2
SNCA-207ENST00000502987 FMR1Q06787 632 aaKnown RBP eCLIP13.83□□□□□ -0.2
SNCA-207ENST00000502987 TRIM28Q13263 835 aaKnown RBP13.83□□□□□ -0.2
SNCA-207ENST00000502987 CCDC30Q5VVM6 783 aa13.83□□□□□ -0.2
SNCA-207ENST00000502987 C8orf58Q8NAV2 365 aa13.83□□□□□ -0.2
SNCA-207ENST00000502987 METRNQ9UJH8 293 aa13.83□□□□□ -0.2
SNCA-207ENST00000502987 RASSF10A6NK89 507 aa13.82□□□□□ -0.2
SNCA-207ENST00000502987 TRAF5O00463 557 aa13.82□□□□□ -0.2
SNCA-207ENST00000502987 FOXN1O15353 648 aa13.82□□□□□ -0.2
SNCA-207ENST00000502987 RPS8P62241 208 aaKnown RBP13.82□□□□□ -0.2
SNCA-207ENST00000502987 ZBTB38Q8NAP3 1195 aaPredicted RBP13.82□□□□□ -0.2
SNCA-207ENST00000502987 JARID2Q92833 1246 aaPredicted RBP13.82□□□□□ -0.2
SNCA-207ENST00000502987 EYA3Q99504 573 aa13.82□□□□□ -0.2
SNCA-207ENST00000502987 DBNDD1Q9H9R9 158 aa13.82□□□□□ -0.2
SNCA-207ENST00000502987 CNOT7Q9UIV1 285 aaKnown RBP13.82□□□□□ -0.2
SNCA-207ENST00000502987 WDR33Q9C0J8 1336 aaKnown RBP13.82□□□□□ -0.2
SNCA-207ENST00000502987 CTCFP49711 727 aaPredicted RBP13.81□□□□□ -0.2
SNCA-207ENST00000502987 GPSM2P81274 684 aa13.81□□□□□ -0.2
SNCA-207ENST00000502987 DOK7Q18PE1 504 aa13.81□□□□□ -0.2
SNCA-207ENST00000502987 CCDC85AQ96PX6 553 aaPredicted RBP13.81□□□□□ -0.2
SNCA-207ENST00000502987 STK31Q9BXU1 1019 aa13.81□□□□□ -0.2
SNCA-207ENST00000502987 CWC25Q9NXE8 425 aaPredicted RBP13.81□□□□□ -0.2
SNCA-207ENST00000502987 ANKIB1Q9P2G1 1089 aa13.81□□□□□ -0.2
SNCA-207ENST00000502987 YDJCA8MPS7 323 aa13.8□□□□□ -0.2
SNCA-207ENST00000502987 CCDC152Q4G0S7 254 aa13.8□□□□□ -0.2
SNCA-207ENST00000502987 CCDC191Q8NCU4 936 aa13.8□□□□□ -0.2
SNCA-207ENST00000502987 ZC3H12CQ9C0D7 883 aaKnown RBP13.8□□□□□ -0.2
SNCA-207ENST00000502987 ZNF408Q9H9D4 720 aa13.8□□□□□ -0.2
SNCA-207ENST00000502987 SEC31BQ9NQW1 1179 aa13.8□□□□□ -0.2
SNCA-207ENST00000502987 POLLQ9UGP5 575 aa13.8□□□□□ -0.2
SNCA-207ENST00000502987 PDE8AO60658 829 aa13.79□□□□□ -0.2
SNCA-207ENST00000502987 CELF2O95319 508 aaKnown RBP13.79□□□□□ -0.2
SNCA-207ENST00000502987 PCCAP05165 728 aaPredicted RBP13.79□□□□□ -0.2
SNCA-207ENST00000502987 ECE1P42892 770 aa13.79□□□□□ -0.2
SNCA-207ENST00000502987 MAP2K1Q02750 393 aaPredicted RBP13.79□□□□□ -0.2
SNCA-207ENST00000502987 RBM26Q5T8P6 1007 aaKnown RBP13.79□□□□□ -0.2
SNCA-207ENST00000502987 CST9Q5W186 159 aa13.79□□□□□ -0.2
SNCA-207ENST00000502987 MICALL2Q8IY33 904 aa13.79□□□□□ -0.2
SNCA-207ENST00000502987 TSPYL6Q8N831 410 aa13.79□□□□□ -0.2
SNCA-207ENST00000502987 TSR2Q969E8 191 aaKnown RBP13.79□□□□□ -0.2
SNCA-207ENST00000502987 KIF12Q96FN5 646 aa13.79□□□□□ -0.2
SNCA-207ENST00000502987 CAPNS2Q96L46 248 aa13.79□□□□□ -0.2
SNCA-207ENST00000502987 GPR101Q96P66 508 aaPredicted RBP13.79□□□□□ -0.2
SNCA-207ENST00000502987 BEGAINQ9BUH8 593 aa13.79□□□□□ -0.2
SNCA-207ENST00000502987 METTL22Q9BUU2 404 aaPredicted RBP13.79□□□□□ -0.2
SNCA-207ENST00000502987 GLIS2Q9BZE0 524 aaPredicted RBP13.79□□□□□ -0.2
SNCA-207ENST00000502987 MAP3K2Q9Y2U5 619 aa13.79□□□□□ -0.2
SNCA-207ENST00000502987 LRRC37AA6NMS7 1700 aa13.78□□□□□ -0.2
SNCA-207ENST00000502987 PSMD14O00487 310 aa13.78□□□□□ -0.2
SNCA-207ENST00000502987 ECE2O60344 883 aa13.78□□□□□ -0.2
SNCA-207ENST00000502987 UFL1O94874 794 aa13.78□□□□□ -0.2
SNCA-207ENST00000502987 LBX1P52954 281 aa13.78□□□□□ -0.2
SNCA-207ENST00000502987 NEXNQ0ZGT2 675 aa13.78□□□□□ -0.2
SNCA-207ENST00000502987 CCDC184Q52MB2 194 aa13.78□□□□□ -0.2
SNCA-207ENST00000502987 CYP4F22Q6NT55 531 aa13.78□□□□□ -0.2
SNCA-207ENST00000502987 TBC1D16Q8TBP0 767 aa13.78□□□□□ -0.2
SNCA-207ENST00000502987 WBP1LQ9NX94 342 aa13.78□□□□□ -0.2
SNCA-207ENST00000502987 CDHR2Q9BYE9 1310 aa13.78□□□□□ -0.2
SNCA-207ENST00000502987 SHTN1A0MZ66 631 aa13.77□□□□□ -0.21
SNCA-207ENST00000502987 PI4KAP2A4QPH2 592 aa13.77□□□□□ -0.21
SNCA-207ENST00000502987 POLR2AP24928 1970 aaKnown RBP13.77□□□□□ -0.21
SNCA-207ENST00000502987 TBC1D10BQ4KMP7 808 aaPredicted RBP13.77□□□□□ -0.21
SNCA-207ENST00000502987 CDC37L1Q7L3B6 337 aa13.77□□□□□ -0.21
SNCA-207ENST00000502987 SAMD7Q7Z3H4 446 aa13.77□□□□□ -0.21
SNCA-207ENST00000502987 USP48Q86UV5 1035 aa13.77□□□□□ -0.21
SNCA-207ENST00000502987 ANKRD18AQ8IVF6 992 aa13.77□□□□□ -0.21
SNCA-207ENST00000502987 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
SNCA-207ENST00000502987 PI4KAP1Q8N8J0 262 aa13.77□□□□□ -0.21
SNCA-207ENST00000502987 TRPM4Q8TD43 1214 aa13.77□□□□□ -0.21
SNCA-207ENST00000502987 ZC3H15Q8WU90 426 aaKnown RBP13.77□□□□□ -0.21
SNCA-207ENST00000502987 SLC39A7Q92504 469 aa13.77□□□□□ -0.21
SNCA-207ENST00000502987 PRDM10Q9NQV6 1147 aa13.77□□□□□ -0.21
SNCA-207ENST00000502987 GGA1Q9UJY5 639 aa13.77□□□□□ -0.21
SNCA-207ENST00000502987 SALL2Q9Y467 1007 aaPredicted RBP13.77□□□□□ -0.21
SNCA-207ENST00000502987 DUOX1Q9NRD9 1551 aa13.76□□□□□ -0.21
SNCA-207ENST00000502987 C7P10643 843 aa13.76□□□□□ -0.21
SNCA-207ENST00000502987 HIRAP54198 1017 aaPredicted RBP13.76□□□□□ -0.21
SNCA-207ENST00000502987 TWISTNBQ3B726 338 aaPredicted RBP13.76□□□□□ -0.21
SNCA-207ENST00000502987 KSR2Q6VAB6 950 aa13.76□□□□□ -0.21
SNCA-207ENST00000502987 DPF2Q92785 391 aa13.76□□□□□ -0.21
SNCA-207ENST00000502987 MRS2Q9HD23 443 aa13.76□□□□□ -0.21
SNCA-207ENST00000502987 KCNQ5Q9NR82 932 aa13.76□□□□□ -0.21
SNCA-207ENST00000502987 PGAP2Q9UHJ9 254 aa13.76□□□□□ -0.21
SNCA-207ENST00000502987 TLL2Q9Y6L7 1015 aa13.76□□□□□ -0.21
SNCA-207ENST00000502987 ANP32CO43423 234 aa13.75□□□□□ -0.21
SNCA-207ENST00000502987 WWC1Q8IX03 1113 aa13.75□□□□□ -0.21
SNCA-207ENST00000502987 DCPSQ96C86 337 aaKnown RBP13.75□□□□□ -0.21
SNCA-207ENST00000502987 AOC2O75106 756 aa13.74□□□□□ -0.21
SNCA-207ENST00000502987 RPS12P25398 132 aaKnown RBP13.74□□□□□ -0.21
SNCA-207ENST00000502987 ZEB1P37275 1124 aaPredicted RBP13.74□□□□□ -0.21
SNCA-207ENST00000502987 ATN1P54259 1190 aaPredicted RBP13.74□□□□□ -0.21
SNCA-207ENST00000502987 CDC5LQ99459 802 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 1570.5 ms