RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 MVPQ14764 893 aaKnown RBP31.44■■■□□ 2.62
LSM6-202ENST00000502781 C20orf194Q5TEA3 1177 aa31.44■■■□□ 2.62
LSM6-202ENST00000502781 SUPT20HQ8NEM7 779 aa31.44■■■□□ 2.62
LSM6-202ENST00000502781 ZNF594Q96JF6 807 aaPredicted RBP31.44■■■□□ 2.62
LSM6-202ENST00000502781 VPS33BQ9H267 617 aa31.44■■■□□ 2.62
LSM6-202ENST00000502781 ZC3H4Q9UPT8 1303 aaKnown RBP31.44■■■□□ 2.62
LSM6-202ENST00000502781 POLLQ9UGP5 575 aa31.43■■■□□ 2.62
LSM6-202ENST00000502781 XDHP47989 1333 aa31.43■■■□□ 2.62
LSM6-202ENST00000502781 RRP1P56182 461 aaKnown RBP31.43■■■□□ 2.62
LSM6-202ENST00000502781 COG6Q9Y2V7 657 aa31.43■■■□□ 2.62
LSM6-202ENST00000502781 TBC1D16Q8TBP0 767 aa31.42■■■□□ 2.62
LSM6-202ENST00000502781 TAF7LQ5H9L4 462 aa31.41■■■□□ 2.62
LSM6-202ENST00000502781 LDHAL6AQ6ZMR3 332 aa31.41■■■□□ 2.62
LSM6-202ENST00000502781 ANKIB1Q9P2G1 1089 aa31.41■■■□□ 2.62
LSM6-202ENST00000502781 DDX19BQ9UMR2 479 aa31.41■■■□□ 2.62
LSM6-202ENST00000502781 KIAA2012Q0VF49 1180 aa31.4■■■□□ 2.62
LSM6-202ENST00000502781 CCDC88AQ3V6T2 1871 aa31.39■■■□□ 2.62
LSM6-202ENST00000502781 DICER1Q9UPY3 1922 aaKnown RBP31.39■■■□□ 2.62
LSM6-202ENST00000502781 CHRNDQ07001 517 aa31.39■■■□□ 2.62
LSM6-202ENST00000502781 ANKRD2Q9GZV1 360 aa31.39■■■□□ 2.62
LSM6-202ENST00000502781 GGA1Q9UJY5 639 aa31.39■■■□□ 2.62
LSM6-202ENST00000502781 SPEF2Q9C093 1822 aa31.39■■■□□ 2.62
LSM6-202ENST00000502781 COL4A5P29400 1685 aa31.38■■■□□ 2.61
LSM6-202ENST00000502781 PTPN12Q05209 780 aaKnown RBP31.38■■■□□ 2.61
LSM6-202ENST00000502781 PUS3Q9BZE2 481 aaKnown RBP31.38■■■□□ 2.61
LSM6-202ENST00000502781 RIPOR2Q9Y4F9 1068 aa31.38■■■□□ 2.61
LSM6-202ENST00000502781 PPIP5K2O43314 1243 aa31.37■■■□□ 2.61
LSM6-202ENST00000502781 ATP2B4P23634 1241 aa31.37■■■□□ 2.61
LSM6-202ENST00000502781 KLHDC4Q8TBB5 520 aa31.37■■■□□ 2.61
LSM6-202ENST00000502781 C6orf229H3BNL8 230 aa31.36■■■□□ 2.61
LSM6-202ENST00000502781 UFL1O94874 794 aa31.36■■■□□ 2.61
LSM6-202ENST00000502781 AOC3Q16853 763 aa31.36■■■□□ 2.61
LSM6-202ENST00000502781 LARGE2Q8N3Y3 721 aa31.36■■■□□ 2.61
LSM6-202ENST00000502781 CNNM1Q9NRU3 951 aa31.36■■■□□ 2.61
LSM6-202ENST00000502781 ZBTB40Q9NUA8 1239 aa31.35■■■□□ 2.61
LSM6-202ENST00000502781 LEMD3Q9Y2U8 911 aa31.35■■■□□ 2.61
LSM6-202ENST00000502781 WASHC4Q2M389 1173 aa31.34■■■□□ 2.61
LSM6-202ENST00000502781 EYA3Q99504 573 aa31.34■■■□□ 2.61
LSM6-202ENST00000502781 COPRSQ9NQ92 184 aa31.34■■■□□ 2.61
LSM6-202ENST00000502781 WTIPA6NIX2 430 aaPredicted RBP31.33■■■□□ 2.61
LSM6-202ENST00000502781 FZD9O00144 591 aa31.33■■■□□ 2.61
LSM6-202ENST00000502781 SRGAP3O43295 1099 aa31.33■■■□□ 2.61
LSM6-202ENST00000502781 LRRC24Q50LG9 513 aa31.33■■■□□ 2.61
LSM6-202ENST00000502781 JDP2Q8WYK2 163 aa31.33■■■□□ 2.61
LSM6-202ENST00000502781 C1orf115Q9H7X2 142 aa31.33■■■□□ 2.61
LSM6-202ENST00000502781 FBXO3Q9UK99 471 aa31.33■■■□□ 2.61
LSM6-202ENST00000502781 TIAM2Q8IVF5 1701 aa31.33■■■□□ 2.61
LSM6-202ENST00000502781 PNMA6EA0A0J9YXQ4 647 aa31.32■■■□□ 2.6
LSM6-202ENST00000502781 EYA2O00167 538 aa31.32■■■□□ 2.6
LSM6-202ENST00000502781 GPR101Q96P66 508 aaPredicted RBP31.32■■■□□ 2.6
LSM6-202ENST00000502781 CHMP4BQ9H444 224 aaKnown RBP31.32■■■□□ 2.6
LSM6-202ENST00000502781 TAF5LO75529 589 aa31.3■■■□□ 2.6
LSM6-202ENST00000502781 ATP8B2P98198 1209 aa31.3■■■□□ 2.6
LSM6-202ENST00000502781 HELBQ8NG08 1087 aaPredicted RBP31.3■■■□□ 2.6
LSM6-202ENST00000502781 ZNF804BA4D1E1 1349 aa31.3■■■□□ 2.6
LSM6-202ENST00000502781 MROH5Q6ZUA9 1318 aa31.3■■■□□ 2.6
LSM6-202ENST00000502781 MED23Q9ULK4 1368 aa31.3■■■□□ 2.6
LSM6-202ENST00000502781 POLA2Q14181 598 aa31.3■■■□□ 2.6
LSM6-202ENST00000502781 ATG9AQ7Z3C6 839 aa31.3■■■□□ 2.6
LSM6-202ENST00000502781 NIM1KQ8IY84 436 aa31.3■■■□□ 2.6
LSM6-202ENST00000502781 CIAO1O76071 339 aa31.29■■■□□ 2.6
LSM6-202ENST00000502781 VGLL2Q8N8G2 317 aa31.29■■■□□ 2.6
LSM6-202ENST00000502781 ZNF784Q8NCA9 323 aaPredicted RBP31.29■■■□□ 2.6
LSM6-202ENST00000502781 SSH3Q8TE77 659 aa31.29■■■□□ 2.6
LSM6-202ENST00000502781 ZC3H12CQ9C0D7 883 aaKnown RBP31.29■■■□□ 2.6
LSM6-202ENST00000502781 PA2G4Q9UQ80 394 aaKnown RBP31.29■■■□□ 2.6
LSM6-202ENST00000502781 GLTPD2A6NH11 291 aa31.28■■■□□ 2.6
LSM6-202ENST00000502781 RIMBP2O15034 1052 aa31.28■■■□□ 2.6
LSM6-202ENST00000502781 CEP85Q6P2H3 762 aa31.28■■■□□ 2.6
LSM6-202ENST00000502781 IRS2Q9Y4H2 1338 aa31.27■■■□□ 2.6
LSM6-202ENST00000502781 A0A1B0GUL6 1792 aa31.27■■■□□ 2.6
LSM6-202ENST00000502781 SNAP23O00161 211 aa31.27■■■□□ 2.6
LSM6-202ENST00000502781 C15orf52Q6ZUT6 534 aaKnown RBP31.27■■■□□ 2.6
LSM6-202ENST00000502781 ZNRF3Q9ULT6 936 aa31.27■■■□□ 2.6
LSM6-202ENST00000502781 ZNF541Q9H0D2 1346 aa31.26■■■□□ 2.59
LSM6-202ENST00000502781 SIL1Q9H173 461 aa31.25■■■□□ 2.59
LSM6-202ENST00000502781 YDJCA8MPS7 323 aa31.24■■■□□ 2.59
LSM6-202ENST00000502781 KLRK1P26718 216 aa31.24■■■□□ 2.59
LSM6-202ENST00000502781 UBE4AQ14139 1066 aa31.24■■■□□ 2.59
LSM6-202ENST00000502781 METTL24Q5JXM2 366 aa31.24■■■□□ 2.59
LSM6-202ENST00000502781 DPY19L2Q6NUT2 758 aa31.24■■■□□ 2.59
LSM6-202ENST00000502781 TXNRD3Q86VQ6 643 aa31.24■■■□□ 2.59
LSM6-202ENST00000502781 PDE8BO95263 885 aa31.23■■■□□ 2.59
LSM6-202ENST00000502781 IL15P40933 162 aaPredicted RBP31.23■■■□□ 2.59
LSM6-202ENST00000502781 KCNJ4P48050 445 aa31.23■■■□□ 2.59
LSM6-202ENST00000502781 DBNDD1Q9H9R9 158 aa31.23■■■□□ 2.59
LSM6-202ENST00000502781 EIF6P56537 245 aaKnown RBP31.22■■■□□ 2.59
LSM6-202ENST00000502781 ECE2O60344 883 aa31.21■■■□□ 2.59
LSM6-202ENST00000502781 DOK7Q18PE1 504 aa31.21■■■□□ 2.59
LSM6-202ENST00000502781 RPAP2Q8IXW5 612 aaPredicted RBP31.21■■■□□ 2.59
LSM6-202ENST00000502781 KDM2BQ8NHM5 1336 aa31.21■■■□□ 2.59
LSM6-202ENST00000502781 SUPT16HQ9Y5B9 1047 aaKnown RBP31.21■■■□□ 2.59
LSM6-202ENST00000502781 DDNO94850 711 aaPredicted RBP31.2■■■□□ 2.59
LSM6-202ENST00000502781 CXCL9Q07325 125 aa31.2■■■□□ 2.59
LSM6-202ENST00000502781 FGFR2P21802 821 aa31.19■■■□□ 2.58
LSM6-202ENST00000502781 GPC2Q8N158 579 aa31.19■■■□□ 2.58
LSM6-202ENST00000502781 PODNQ7Z5L7 613 aa31.18■■■□□ 2.58
LSM6-202ENST00000502781 SIRT2Q8IXJ6 389 aa31.18■■■□□ 2.58
LSM6-202ENST00000502781 ZNF526Q8TF50 670 aaPredicted RBP31.18■■■□□ 2.58
LSM6-202ENST00000502781 L3MBTL3Q96JM7 780 aaPredicted RBP31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms