RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 DOK7Q18PE1 504 aa16.62■□□□□ 0.25
LMNA-218ENST00000502357 CCDC102AQ96A19 550 aa16.62■□□□□ 0.25
LMNA-218ENST00000502357 PNNQ9H307 717 aaKnown RBP16.62■□□□□ 0.25
LMNA-218ENST00000502357 PODXL2Q9NZ53 605 aa16.62■□□□□ 0.25
LMNA-218ENST00000502357 ANKRD13DQ6ZTN6 518 aa16.61■□□□□ 0.25
LMNA-218ENST00000502357 GMLQ99445 158 aa16.61■□□□□ 0.25
LMNA-218ENST00000502357 ZNF646O15015 1829 aaPredicted RBP16.61■□□□□ 0.25
LMNA-218ENST00000502357 ATP5J2-PTCD1G3V325 749 aa16.6■□□□□ 0.25
LMNA-218ENST00000502357 TRPA1O75762 1119 aa16.6■□□□□ 0.25
LMNA-218ENST00000502357 ZNF280AP59817 542 aaPredicted RBP16.6■□□□□ 0.25
LMNA-218ENST00000502357 KIF4BQ2VIQ3 1234 aa16.6■□□□□ 0.25
LMNA-218ENST00000502357 RBM26Q5T8P6 1007 aaKnown RBP16.6■□□□□ 0.25
LMNA-218ENST00000502357 C2orf69Q8N8R5 385 aa16.6■□□□□ 0.25
LMNA-218ENST00000502357 ZNF157P51786 506 aaPredicted RBP16.59■□□□□ 0.25
LMNA-218ENST00000502357 RPS8P62241 208 aaKnown RBP16.59■□□□□ 0.25
LMNA-218ENST00000502357 DCPSQ96C86 337 aaKnown RBP16.59■□□□□ 0.25
LMNA-218ENST00000502357 CDCA5Q96FF9 252 aa16.59■□□□□ 0.25
LMNA-218ENST00000502357 CFAP44Q96MT7 982 aa16.59■□□□□ 0.25
LMNA-218ENST00000502357 SEC31BQ9NQW1 1179 aa16.59■□□□□ 0.25
LMNA-218ENST00000502357 GGA3Q9NZ52 723 aa16.59■□□□□ 0.25
LMNA-218ENST00000502357 C6orf229H3BNL8 230 aa16.58■□□□□ 0.24
LMNA-218ENST00000502357 HOXB7P09629 217 aa16.58■□□□□ 0.24
LMNA-218ENST00000502357 SOX10P56693 466 aa16.58■□□□□ 0.24
LMNA-218ENST00000502357 RASAL3Q86YV0 1011 aa16.58■□□□□ 0.24
LMNA-218ENST00000502357 IRS4O14654 1257 aaPredicted RBP16.57■□□□□ 0.24
LMNA-218ENST00000502357 EYA3Q99504 573 aa16.57■□□□□ 0.24
LMNA-218ENST00000502357 LMOD3Q0VAK6 560 aa16.56■□□□□ 0.24
LMNA-218ENST00000502357 RTL5Q5HYW3 569 aaPredicted RBP16.56■□□□□ 0.24
LMNA-218ENST00000502357 HDGFL1Q5TGJ6 251 aa16.56■□□□□ 0.24
LMNA-218ENST00000502357 DBF4Q9UBU7 674 aaPredicted RBP16.56■□□□□ 0.24
LMNA-218ENST00000502357 PAPPA2Q9BXP8 1791 aa16.56■□□□□ 0.24
LMNA-218ENST00000502357 WTIPA6NIX2 430 aaPredicted RBP16.55■□□□□ 0.24
LMNA-218ENST00000502357 SCARF1Q14162 830 aa16.55■□□□□ 0.24
LMNA-218ENST00000502357 ANGEL2Q5VTE6 544 aaKnown RBP16.55■□□□□ 0.24
LMNA-218ENST00000502357 RSBN1LQ6PCB5 846 aaPredicted RBP16.55■□□□□ 0.24
LMNA-218ENST00000502357 CTU1Q7Z7A3 348 aaKnown RBP16.55■□□□□ 0.24
LMNA-218ENST00000502357 AGBL3Q8NEM8 1001 aa16.55■□□□□ 0.24
LMNA-218ENST00000502357 ZNF853P0CG23 659 aa16.54■□□□□ 0.24
LMNA-218ENST00000502357 MOB2Q70IA6 237 aa16.54■□□□□ 0.24
LMNA-218ENST00000502357 SULF1Q8IWU6 871 aa16.54■□□□□ 0.24
LMNA-218ENST00000502357 ZBTB38Q8NAP3 1195 aaPredicted RBP16.54■□□□□ 0.24
LMNA-218ENST00000502357 ZC3H12CQ9C0D7 883 aaKnown RBP16.54■□□□□ 0.24
LMNA-218ENST00000502357 DUSP27Q5VZP5 1158 aa16.53■□□□□ 0.24
LMNA-218ENST00000502357 CCDC146Q8IYE0 955 aa16.53■□□□□ 0.24
LMNA-218ENST00000502357 PHAXQ9H814 394 aaKnown RBP16.53■□□□□ 0.24
LMNA-218ENST00000502357 HYPKQ9NX55 129 aa16.53■□□□□ 0.24
LMNA-218ENST00000502357 SCAF8Q9UPN6 1271 aaKnown RBP16.53■□□□□ 0.24
LMNA-218ENST00000502357 PITPNM2Q9BZ72 1349 aa16.52■□□□□ 0.24
LMNA-218ENST00000502357 UFL1O94874 794 aa16.52■□□□□ 0.24
LMNA-218ENST00000502357 FKBP1BP68106 108 aa16.52■□□□□ 0.24
LMNA-218ENST00000502357 NEUROD2Q15784 382 aa16.52■□□□□ 0.24
LMNA-218ENST00000502357 REM2Q8IYK8 340 aaPredicted RBP16.52■□□□□ 0.24
LMNA-218ENST00000502357 HPS5Q9UPZ3 1129 aa16.52■□□□□ 0.24
LMNA-218ENST00000502357 MYOZ2Q9NPC6 264 aa16.51■□□□□ 0.23
LMNA-218ENST00000502357 MBIPQ9NS73 344 aa16.51■□□□□ 0.23
LMNA-218ENST00000502357 GGA1Q9UJY5 639 aa16.51■□□□□ 0.23
LMNA-218ENST00000502357 PCCAP05165 728 aaPredicted RBP16.5■□□□□ 0.23
LMNA-218ENST00000502357 TM4SF4P48230 202 aa16.5■□□□□ 0.23
LMNA-218ENST00000502357 RALBP1Q15311 655 aa16.5■□□□□ 0.23
LMNA-218ENST00000502357 PRAMEF18Q5VWM3 479 aa16.5■□□□□ 0.23
LMNA-218ENST00000502357 RUNDC1Q96C34 613 aa16.5■□□□□ 0.23
LMNA-218ENST00000502357 USP17L8P0C7I0 530 aa16.49■□□□□ 0.23
LMNA-218ENST00000502357 NBPF9Q3BBW0 867 aa16.49■□□□□ 0.23
LMNA-218ENST00000502357 NOM1Q5C9Z4 860 aaKnown RBP16.49■□□□□ 0.23
LMNA-218ENST00000502357 PRPF38BQ5VTL8 546 aaKnown RBP16.49■□□□□ 0.23
LMNA-218ENST00000502357 ZNF296Q8WUU4 475 aaPredicted RBP16.49■□□□□ 0.23
LMNA-218ENST00000502357 JARID2Q92833 1246 aaPredicted RBP16.49■□□□□ 0.23
LMNA-218ENST00000502357 LAS1LQ9Y4W2 734 aaKnown RBP16.49■□□□□ 0.23
LMNA-218ENST00000502357 UBE2Q2LH0YL09 131 aa16.48■□□□□ 0.23
LMNA-218ENST00000502357 PDE8AO60658 829 aa16.48■□□□□ 0.23
LMNA-218ENST00000502357 TBC1D8O95759 1140 aa16.48■□□□□ 0.23
LMNA-218ENST00000502357 DACT2Q5SW24 774 aa16.48■□□□□ 0.23
LMNA-218ENST00000502357 PODNQ7Z5L7 613 aa16.48■□□□□ 0.23
LMNA-218ENST00000502357 CCDC191Q8NCU4 936 aa16.48■□□□□ 0.23
LMNA-218ENST00000502357 MXD3Q9BW11 206 aa16.48■□□□□ 0.23
LMNA-218ENST00000502357 CFHR5Q9BXR6 569 aa16.48■□□□□ 0.23
LMNA-218ENST00000502357 R3HDMLQ9H3Y0 253 aa16.48■□□□□ 0.23
LMNA-218ENST00000502357 ANKIB1Q9P2G1 1089 aa16.48■□□□□ 0.23
LMNA-218ENST00000502357 HTTP42858 3142 aa16.48■□□□□ 0.23
LMNA-218ENST00000502357 XDHP47989 1333 aa16.47■□□□□ 0.23
LMNA-218ENST00000502357 USP17L3A6NCW0 530 aa16.47■□□□□ 0.23
LMNA-218ENST00000502357 USP17L4A6NCW7 530 aa16.47■□□□□ 0.23
LMNA-218ENST00000502357 USP17L1Q7RTZ2 530 aa16.47■□□□□ 0.23
LMNA-218ENST00000502357 MYD88Q99836 296 aa16.47■□□□□ 0.23
LMNA-218ENST00000502357 ADAMTS8Q9UP79 889 aa16.47■□□□□ 0.23
LMNA-218ENST00000502357 WNT10BO00744 389 aa16.46■□□□□ 0.23
LMNA-218ENST00000502357 ATP2B4P23634 1241 aa16.46■□□□□ 0.23
LMNA-218ENST00000502357 PKN2Q16513 984 aaKnown RBP16.46■□□□□ 0.23
LMNA-218ENST00000502357 CCDC152Q4G0S7 254 aa16.46■□□□□ 0.23
LMNA-218ENST00000502357 RIC3Q7Z5B4 369 aa16.46■□□□□ 0.23
LMNA-218ENST00000502357 TXNRD3Q86VQ6 643 aa16.46■□□□□ 0.23
LMNA-218ENST00000502357 ZBED3Q96IU2 234 aaPredicted RBP16.46■□□□□ 0.23
LMNA-218ENST00000502357 CCDC85AQ96PX6 553 aaPredicted RBP16.46■□□□□ 0.23
LMNA-218ENST00000502357 GPR25O00155 361 aa16.45■□□□□ 0.22
LMNA-218ENST00000502357 IGKV5-2P06315 115 aa16.45■□□□□ 0.22
LMNA-218ENST00000502357 METTL22Q9BUU2 404 aaPredicted RBP16.45■□□□□ 0.22
LMNA-218ENST00000502357 MINPP1Q9UNW1 487 aa16.45■□□□□ 0.22
LMNA-218ENST00000502357 MED23Q9ULK4 1368 aa16.45■□□□□ 0.22
LMNA-218ENST00000502357 LAMB1P07942 1786 aa16.45■□□□□ 0.22
LMNA-218ENST00000502357 MKI67P46013 3256 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms