RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 TNNC1P63316 161 aa12.64□□□□□ -0.39
AC055713.1-201ENST00000498967 LRRC9Q6ZRR7 1453 aa12.64□□□□□ -0.39
AC055713.1-201ENST00000498967 ZEB2O60315 1214 aa12.64□□□□□ -0.39
AC055713.1-201ENST00000498967 PPFIA3O75145 1194 aa12.64□□□□□ -0.39
AC055713.1-201ENST00000498967 EXOC1Q9NV70 894 aa12.64□□□□□ -0.39
AC055713.1-201ENST00000498967 TAF12Q16514 161 aa12.64□□□□□ -0.39
AC055713.1-201ENST00000498967 IGHMBP2P38935 993 aaKnown RBP12.64□□□□□ -0.39
AC055713.1-201ENST00000498967 RUSC2Q8N2Y8 1516 aa12.64□□□□□ -0.39
AC055713.1-201ENST00000498967 GOLGA8QA0A0J9YX86 632 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 GOLGA8OA6NCC3 632 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 GOLGA8NF8WBI6 632 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 AP1ARQ63HQ0 302 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 ZHX1Q9UKY1 873 aaPredicted RBP12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 NBPF7P0C2Y1 421 aaPredicted RBP12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 ARHGAP4P98171 946 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 MCM10Q7L590 875 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 ARHGEF2Q92974 986 aaKnown RBP12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 JAKMIP1Q96N16 626 aaKnown RBP12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 CCT6AP40227 531 aaKnown RBP12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 CXorf38Q8TB03 319 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 ZNF428Q96B54 188 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 PHEXP78562 749 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 ITIH3Q06033 890 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 UVSSAQ2YD98 709 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 SATB2Q9UPW6 733 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 ZNF652Q9Y2D9 606 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 COPG1Q9Y678 874 aaKnown RBP12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 HFM1A2PYH4 1435 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 E9PMD0 336 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 TTF1Q15361 905 aaPredicted RBP12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 ANGPTL3Q9Y5C1 460 aa12.63□□□□□ -0.39
AC055713.1-201ENST00000498967 CDR2Q01850 454 aa12.62□□□□□ -0.39
AC055713.1-201ENST00000498967 PPP1R7Q15435 360 aa12.62□□□□□ -0.39
AC055713.1-201ENST00000498967 EVI5LQ96CN4 794 aa12.62□□□□□ -0.39
AC055713.1-201ENST00000498967 NAPBQ9H115 298 aa12.62□□□□□ -0.39
AC055713.1-201ENST00000498967 HDXQ7Z353 690 aa12.62□□□□□ -0.39
AC055713.1-201ENST00000498967 LRRC43Q8N309 656 aa12.62□□□□□ -0.39
AC055713.1-201ENST00000498967 KCNK9Q9NPC2 374 aa12.62□□□□□ -0.39
AC055713.1-201ENST00000498967 DBN1Q16643 649 aa12.62□□□□□ -0.39
AC055713.1-201ENST00000498967 TMC6Q7Z403 805 aa12.62□□□□□ -0.39
AC055713.1-201ENST00000498967 LIMCH1Q9UPQ0 1083 aa12.62□□□□□ -0.39
AC055713.1-201ENST00000498967 AFG3L2Q9Y4W6 797 aa12.62□□□□□ -0.39
AC055713.1-201ENST00000498967 N4BP3O15049 544 aa12.62□□□□□ -0.39
AC055713.1-201ENST00000498967 NRBF2Q96F24 287 aa12.62□□□□□ -0.39
AC055713.1-201ENST00000498967 ZBTB24O43167 697 aaPredicted RBP12.62□□□□□ -0.39
AC055713.1-201ENST00000498967 CAVIN4Q5BKX8 364 aa12.62□□□□□ -0.39
AC055713.1-201ENST00000498967 SPECC1L-ADORA2AF8WAN1 911 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 PSMD6Q15008 389 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 FAF1Q9UNN5 650 aaPredicted RBP12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 ERICH3Q5RHP9 1530 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 TTC16Q8NEE8 873 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 SAMM50Q9Y512 469 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 ZNF444Q8N0Y2 327 aaPredicted RBP12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 FAM8A1Q9UBU6 413 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 SLC12A7Q9Y666 1083 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 GPRASP1Q5JY77 1395 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 PYGLP06737 847 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 PLCB4Q15147 1175 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 NLRP2Q9NX02 1062 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 PFDN1O60925 122 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 CHMP4BP1P59074 171 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 CCDC125Q86Z20 511 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 KIF21BO75037 1637 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 E7EVH7 732 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 POLR3DP05423 398 aaPredicted RBP12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 CCDC102BQ68D86 513 aa12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 ZC3H15Q8WU90 426 aaKnown RBP12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 TRMT1Q9NXH9 659 aaKnown RBP12.61□□□□□ -0.39
AC055713.1-201ENST00000498967 NLRP5P59047 1200 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 TUBB2AQ13885 445 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 NONOQ15233 471 aaKnown RBP eCLIP12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 TUBB2BQ9BVA1 445 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 ORC6Q9Y5N6 252 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 A0A1B0GW55 424 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 DUX4L2P0CJ85 424 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 DUX4L3P0CJ86 424 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 DUX4L4P0CJ87 422 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 DUX4L5P0CJ88 424 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 DUX4L6P0CJ89 424 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 DUX4L7P0CJ90 424 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 SSRP1Q08945 709 aaKnown RBP12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 DUX4Q9UBX2 424 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 HSPA8P11142 646 aaKnown RBP12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 RUFY4Q6ZNE9 571 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 EEF2P13639 858 aaKnown RBP12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 TRIM47Q96LD4 638 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 RAB11FIP3O75154 756 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 RPS6KA2Q15349 733 aa12.6□□□□□ -0.39
AC055713.1-201ENST00000498967 TERF1P54274 439 aa12.59□□□□□ -0.39
AC055713.1-201ENST00000498967 CAMK4Q16566 473 aa12.59□□□□□ -0.39
AC055713.1-201ENST00000498967 FNBP4Q8N3X1 1017 aaPredicted RBP12.59□□□□□ -0.39
AC055713.1-201ENST00000498967 ESRRGP62508 458 aa12.59□□□□□ -0.39
AC055713.1-201ENST00000498967 CTTNBP2NLQ9P2B4 639 aa12.59□□□□□ -0.39
AC055713.1-201ENST00000498967 MAN1A2O60476 641 aa12.59□□□□□ -0.39
AC055713.1-201ENST00000498967 INPP5BP32019 993 aa12.59□□□□□ -0.39
AC055713.1-201ENST00000498967 CA8P35219 290 aa12.59□□□□□ -0.39
AC055713.1-201ENST00000498967 ZNF165P49910 485 aa12.59□□□□□ -0.39
AC055713.1-201ENST00000498967 KIFC2Q96AC6 838 aa12.59□□□□□ -0.39
AC055713.1-201ENST00000498967 PSMA7O14818 248 aa12.59□□□□□ -0.39
AC055713.1-201ENST00000498967 MPNDQ8N594 471 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms