RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 FAM170AA1A519 330 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 USP17L15C9J2P7 530 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 USP17L10C9JJH3 530 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 USP17L13C9JLJ4 530 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 USP17L12C9JPN9 530 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 USP17L11C9JVI0 530 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 USP17L21D6R901 530 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 USP17L18D6R9N7 530 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 USP17L22D6RA61 530 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 USP17L17D6RBQ6 530 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 USP17L19D6RCP7 530 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 USP17L20D6RJB6 530 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 VAMP4O75379 141 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 P4HBP07237 508 aaKnown RBP8.81□□□□□ -1
PDCD4-211ENST00000498367 RBP3P10745 1247 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 INSM1Q01101 510 aaPredicted RBP8.81□□□□□ -1
PDCD4-211ENST00000498367 KIAA2012Q0VF49 1180 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 USP17L24Q0WX57 530 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 MORC3Q14149 939 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 NFE2Q16621 373 aaPredicted RBP8.81□□□□□ -1
PDCD4-211ENST00000498367 C10orf62Q5T681 223 aaPredicted RBP8.81□□□□□ -1
PDCD4-211ENST00000498367 ACBD5Q5T8D3 534 aaPredicted RBP8.81□□□□□ -1
PDCD4-211ENST00000498367 CCDC73Q6ZRK6 1079 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 TMC4Q7Z404 712 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 NDUFAF2Q8N183 169 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 NFATC2IPQ8NCF5 419 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 SPIRE2Q8WWL2 714 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 SRPK1Q96SB4 655 aaKnown RBP8.81□□□□□ -1
PDCD4-211ENST00000498367 ALDH8A1Q9H2A2 487 aaPredicted RBP8.81□□□□□ -1
PDCD4-211ENST00000498367 PPCSQ9HAB8 311 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 SIRPGQ9P1W8 387 aa8.81□□□□□ -1
PDCD4-211ENST00000498367 A0A1W2PRQ8 180 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 SPTLC1O15269 473 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 ALDH1A1P00352 501 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 FGRP09769 529 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 TDO2P48775 406 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 CLK1P49759 484 aaKnown RBP8.8□□□□□ -1
PDCD4-211ENST00000498367 EIF4G2P78344 907 aaKnown RBP eCLIP8.8□□□□□ -1
PDCD4-211ENST00000498367 SERINC3Q13530 473 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 TAF11Q15544 211 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 HSP90B2PQ58FF3 399 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 TAF3Q5VWG9 929 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 LARP1BQ659C4 914 aaKnown RBP8.8□□□□□ -1
PDCD4-211ENST00000498367 CPXCR1Q8N123 301 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 ZNF513Q8N8E2 541 aaPredicted RBP8.8□□□□□ -1
PDCD4-211ENST00000498367 FRS2Q8WU20 508 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 KIFC2Q96AC6 838 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 CDHR1Q96JP9 859 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 CLIC5Q9NZA1 410 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 RAI14Q9P0K7 980 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 EVLQ9UI08 416 aaPredicted RBP8.8□□□□□ -1
PDCD4-211ENST00000498367 HDAC9Q9UKV0 1011 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 GTF2A1LQ9UNN4 478 aa8.8□□□□□ -1
PDCD4-211ENST00000498367 TERTO14746 1132 aaKnown RBP8.79□□□□□ -1
PDCD4-211ENST00000498367 PRPF40AO75400 957 aaKnown RBP8.79□□□□□ -1
PDCD4-211ENST00000498367 CCNYL3P0C7X3 344 aa8.79□□□□□ -1
PDCD4-211ENST00000498367 ATF3P18847 181 aa8.79□□□□□ -1
PDCD4-211ENST00000498367 CASQ1P31415 396 aa8.79□□□□□ -1
PDCD4-211ENST00000498367 PPM1FP49593 454 aaPredicted RBP8.79□□□□□ -1
PDCD4-211ENST00000498367 SIM2Q14190 667 aaPredicted RBP8.79□□□□□ -1
PDCD4-211ENST00000498367 PTPRNQ16849 979 aa8.79□□□□□ -1
PDCD4-211ENST00000498367 CATIPQ7Z7H3 387 aa8.79□□□□□ -1
PDCD4-211ENST00000498367 E2F7Q96AV8 911 aa8.79□□□□□ -1
PDCD4-211ENST00000498367 PAIP2Q9BPZ3 127 aaKnown RBP8.79□□□□□ -1
PDCD4-211ENST00000498367 C12orf49Q9H741 205 aa8.79□□□□□ -1
PDCD4-211ENST00000498367 SLAIN2Q9P270 581 aa8.79□□□□□ -1
PDCD4-211ENST00000498367 ZNF652Q9Y2D9 606 aa8.79□□□□□ -1
PDCD4-211ENST00000498367 C6orf229H3BNL8 230 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 PRMT3O60678 531 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 TCEA3O75764 348 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 TPM2P07951 284 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 FOSL1P15407 271 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 SEC13P55735 322 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 SH3BP2P78314 561 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 FAM69CQ0P6D2 419 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 WASHC5Q12768 1159 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 PDE1CQ14123 709 aaPredicted RBP8.78□□□□□ -1
PDCD4-211ENST00000498367 C1QTNF12Q5T7M4 302 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 KLHL10Q6JEL2 608 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 TAS1R3Q7RTX0 852 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 HOMER1Q86YM7 354 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 PPHLN1Q8NEY8 458 aaKnown RBP8.78□□□□□ -1
PDCD4-211ENST00000498367 ATRIPQ8WXE1 791 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 RPGRQ92834 1020 aaKnown RBP8.78□□□□□ -1
PDCD4-211ENST00000498367 SELENOOQ9BVL4 669 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 TSPY26PQ9H489 355 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 ENAMQ9NRM1 1142 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 RBM28Q9NW13 759 aaKnown RBP8.78□□□□□ -1
PDCD4-211ENST00000498367 FANCLQ9NW38 375 aa8.78□□□□□ -1
PDCD4-211ENST00000498367 CDV3Q9UKY7 258 aaKnown RBP8.78□□□□□ -1
PDCD4-211ENST00000498367 MOXD2PA6NHM9 499 aa8.77□□□□□ -1.01
PDCD4-211ENST00000498367 NUTM2BA6NNL0 878 aaPredicted RBP8.77□□□□□ -1.01
PDCD4-211ENST00000498367 NUTM2EB1AL46 878 aaPredicted RBP8.77□□□□□ -1.01
PDCD4-211ENST00000498367 PRRT4C9JH25 899 aa8.77□□□□□ -1.01
PDCD4-211ENST00000498367 GOLGA6L22H0YM25 854 aa8.77□□□□□ -1.01
PDCD4-211ENST00000498367 ORC4O43929 436 aa8.77□□□□□ -1.01
PDCD4-211ENST00000498367 NDUFV2P19404 249 aa8.77□□□□□ -1.01
PDCD4-211ENST00000498367 DDIT3P35638 169 aa8.77□□□□□ -1.01
PDCD4-211ENST00000498367 GJA5P36382 358 aa8.77□□□□□ -1.01
PDCD4-211ENST00000498367 GEMIN4P57678 1058 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 213.6 ms