RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 CSRNP1Q96S65 589 aa15.29■□□□□ 0.04
CDK9-205ENST00000498339 HDAC9Q9UKV0 1011 aa15.29■□□□□ 0.04
CDK9-205ENST00000498339 GPSM2P81274 684 aa15.28■□□□□ 0.04
CDK9-205ENST00000498339 KCNQ5Q9NR82 932 aa15.28■□□□□ 0.04
CDK9-205ENST00000498339 POLLQ9UGP5 575 aa15.28■□□□□ 0.04
CDK9-205ENST00000498339 HPS5Q9UPZ3 1129 aa15.28■□□□□ 0.04
CDK9-205ENST00000498339 COL4A1P02462 1669 aa15.28■□□□□ 0.04
CDK9-205ENST00000498339 ASTN2O75129 1339 aaPredicted RBP15.27■□□□□ 0.04
CDK9-205ENST00000498339 RTL5Q5HYW3 569 aaPredicted RBP15.27■□□□□ 0.04
CDK9-205ENST00000498339 RASAL3Q86YV0 1011 aa15.27■□□□□ 0.04
CDK9-205ENST00000498339 REM2Q8IYK8 340 aaPredicted RBP15.27■□□□□ 0.04
CDK9-205ENST00000498339 ANGEL2Q5VTE6 544 aaKnown RBP15.26■□□□□ 0.03
CDK9-205ENST00000498339 FAM89AQ96GI7 184 aa15.26■□□□□ 0.03
CDK9-205ENST00000498339 ZC3H12CQ9C0D7 883 aaKnown RBP15.26■□□□□ 0.03
CDK9-205ENST00000498339 SPEF2Q9C093 1822 aa15.25■□□□□ 0.03
CDK9-205ENST00000498339 UFL1O94874 794 aa15.25■□□□□ 0.03
CDK9-205ENST00000498339 RIPK4P57078 832 aa15.25■□□□□ 0.03
CDK9-205ENST00000498339 TBC1D16Q8TBP0 767 aa15.25■□□□□ 0.03
CDK9-205ENST00000498339 ANKIB1Q9P2G1 1089 aa15.25■□□□□ 0.03
CDK9-205ENST00000498339 ATP5J2-PTCD1G3V325 749 aa15.24■□□□□ 0.03
CDK9-205ENST00000498339 LMOD3Q0VAK6 560 aa15.24■□□□□ 0.03
CDK9-205ENST00000498339 SCARF1Q14162 830 aa15.24■□□□□ 0.03
CDK9-205ENST00000498339 TTLL12Q14166 644 aaPredicted RBP15.24■□□□□ 0.03
CDK9-205ENST00000498339 PKN2Q16513 984 aaKnown RBP15.24■□□□□ 0.03
CDK9-205ENST00000498339 CHPF2Q9P2E5 772 aa15.24■□□□□ 0.03
CDK9-205ENST00000498339 TBC1D8O95759 1140 aa15.23■□□□□ 0.03
CDK9-205ENST00000498339 VIL1P09327 827 aaKnown RBP15.23■□□□□ 0.03
CDK9-205ENST00000498339 SF3B3Q15393 1217 aaKnown RBP15.23■□□□□ 0.03
CDK9-205ENST00000498339 LAS1LQ9Y4W2 734 aaKnown RBP15.23■□□□□ 0.03
CDK9-205ENST00000498339 FKBP1BP68106 108 aa15.22■□□□□ 0.03
CDK9-205ENST00000498339 KRT24Q2M2I5 525 aa15.22■□□□□ 0.03
CDK9-205ENST00000498339 HDGFL1Q5TGJ6 251 aa15.22■□□□□ 0.03
CDK9-205ENST00000498339 PLBD2Q8NHP8 589 aa15.22■□□□□ 0.03
CDK9-205ENST00000498339 ZNF296Q8WUU4 475 aaPredicted RBP15.22■□□□□ 0.03
CDK9-205ENST00000498339 BABAM1Q9NWV8 329 aa15.22■□□□□ 0.03
CDK9-205ENST00000498339 GGA1Q9UJY5 639 aa15.22■□□□□ 0.03
CDK9-205ENST00000498339 SCAF8Q9UPN6 1271 aaKnown RBP15.22■□□□□ 0.03
CDK9-205ENST00000498339 IRS4O14654 1257 aaPredicted RBP15.21■□□□□ 0.03
CDK9-205ENST00000498339 RPS8P62241 208 aaKnown RBP15.21■□□□□ 0.03
CDK9-205ENST00000498339 MKRN3Q13064 507 aaKnown RBP15.21■□□□□ 0.03
CDK9-205ENST00000498339 RSBN1LQ6PCB5 846 aaPredicted RBP15.21■□□□□ 0.03
CDK9-205ENST00000498339 MOB2Q70IA6 237 aa15.21■□□□□ 0.03
CDK9-205ENST00000498339 AGBL3Q8NEM8 1001 aa15.21■□□□□ 0.03
CDK9-205ENST00000498339 MYOZ2Q9NPC6 264 aa15.21■□□□□ 0.03
CDK9-205ENST00000498339 UBE2Q2LH0YL09 131 aa15.2■□□□□ 0.02
CDK9-205ENST00000498339 ANKRD13DQ6ZTN6 518 aa15.2■□□□□ 0.02
CDK9-205ENST00000498339 PITPNM2Q9BZ72 1349 aa15.19■□□□□ 0.02
CDK9-205ENST00000498339 USP17L8P0C7I0 530 aa15.19■□□□□ 0.02
CDK9-205ENST00000498339 ZNF280AP59817 542 aaPredicted RBP15.19■□□□□ 0.02
CDK9-205ENST00000498339 NEUROD2Q15784 382 aa15.19■□□□□ 0.02
CDK9-205ENST00000498339 FBXW7Q969H0 707 aa15.19■□□□□ 0.02
CDK9-205ENST00000498339 GCC1Q96CN9 775 aa15.19■□□□□ 0.02
CDK9-205ENST00000498339 ISCA1Q9BUE6 129 aa15.19■□□□□ 0.02
CDK9-205ENST00000498339 MYH3P11055 1940 aa15.19■□□□□ 0.02
CDK9-205ENST00000498339 MKI67P46013 3256 aaKnown RBP15.19■□□□□ 0.02
CDK9-205ENST00000498339 ZNF609O15014 1411 aa15.18■□□□□ 0.02
CDK9-205ENST00000498339 NF2P35240 595 aa15.18■□□□□ 0.02
CDK9-205ENST00000498339 TMPOP42166 694 aaKnown RBP15.18■□□□□ 0.02
CDK9-205ENST00000498339 PRAMEF18Q5VWM3 479 aa15.18■□□□□ 0.02
CDK9-205ENST00000498339 FBXO46Q6PJ61 603 aaPredicted RBP15.18■□□□□ 0.02
CDK9-205ENST00000498339 SEC31BQ9NQW1 1179 aa15.18■□□□□ 0.02
CDK9-205ENST00000498339 PODXL2Q9NZ53 605 aa15.18■□□□□ 0.02
CDK9-205ENST00000498339 CENPFP49454 3210 aa15.18■□□□□ 0.02
CDK9-205ENST00000498339 GPR25O00155 361 aa15.17■□□□□ 0.02
CDK9-205ENST00000498339 HSP90B1P14625 803 aaKnown RBP15.17■□□□□ 0.02
CDK9-205ENST00000498339 SREBF2Q12772 1141 aa15.17■□□□□ 0.02
CDK9-205ENST00000498339 RIC3Q7Z5B4 369 aa15.17■□□□□ 0.02
CDK9-205ENST00000498339 CCDC85AQ96PX6 553 aaPredicted RBP15.17■□□□□ 0.02
CDK9-205ENST00000498339 DBF4Q9UBU7 674 aaPredicted RBP15.17■□□□□ 0.02
CDK9-205ENST00000498339 ZNF646O15015 1829 aaPredicted RBP15.16■□□□□ 0.02
CDK9-205ENST00000498339 USP17L3A6NCW0 530 aa15.16■□□□□ 0.02
CDK9-205ENST00000498339 USP17L4A6NCW7 530 aa15.16■□□□□ 0.02
CDK9-205ENST00000498339 GOLGA2Q08379 1002 aa15.16■□□□□ 0.02
CDK9-205ENST00000498339 CCDC152Q4G0S7 254 aa15.16■□□□□ 0.02
CDK9-205ENST00000498339 USP17L1Q7RTZ2 530 aa15.16■□□□□ 0.02
CDK9-205ENST00000498339 HYPKQ9NX55 129 aa15.16■□□□□ 0.02
CDK9-205ENST00000498339 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.16■□□□□ 0.02
CDK9-205ENST00000498339 XDHP47989 1333 aa15.16■□□□□ 0.02
CDK9-205ENST00000498339 FKTNO75072 461 aa15.15■□□□□ 0.02
CDK9-205ENST00000498339 PRKG1Q13976 671 aa15.15■□□□□ 0.02
CDK9-205ENST00000498339 ANKRD18AQ8IVF6 992 aa15.15■□□□□ 0.02
CDK9-205ENST00000498339 CCDC146Q8IYE0 955 aa15.15■□□□□ 0.02
CDK9-205ENST00000498339 ZBTB38Q8NAP3 1195 aaPredicted RBP15.15■□□□□ 0.02
CDK9-205ENST00000498339 NBPF9Q3BBW0 867 aa15.14■□□□□ 0.01
CDK9-205ENST00000498339 OGFOD1Q8N543 542 aa15.14■□□□□ 0.01
CDK9-205ENST00000498339 MYD88Q99836 296 aa15.14■□□□□ 0.01
CDK9-205ENST00000498339 RBBP6Q7Z6E9 1792 aaKnown RBP15.13■□□□□ 0.01
CDK9-205ENST00000498339 HTTP42858 3142 aa15.13■□□□□ 0.01
CDK9-205ENST00000498339 CHL1O00533 1208 aa15.13■□□□□ 0.01
CDK9-205ENST00000498339 HOXB7P09629 217 aa15.13■□□□□ 0.01
CDK9-205ENST00000498339 ATP2B4P23634 1241 aa15.13■□□□□ 0.01
CDK9-205ENST00000498339 TM4SF4P48230 202 aa15.13■□□□□ 0.01
CDK9-205ENST00000498339 ARMC9Q7Z3E5 817 aa15.13■□□□□ 0.01
CDK9-205ENST00000498339 GMLQ99445 158 aa15.13■□□□□ 0.01
CDK9-205ENST00000498339 ECM29Q5VYK3 1845 aa15.13■□□□□ 0.01
CDK9-205ENST00000498339 BRCA2P51587 3418 aa15.12■□□□□ 0.01
CDK9-205ENST00000498339 PDE8AO60658 829 aa15.12■□□□□ 0.01
CDK9-205ENST00000498339 SASH1O94885 1247 aa15.12■□□□□ 0.01
CDK9-205ENST00000498339 TRIM28Q13263 835 aaKnown RBP15.12■□□□□ 0.01
CDK9-205ENST00000498339 NOM1Q5C9Z4 860 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms