RNA–Protein interactions for RNA: ENST00000497791.5

UMPS-209, Transcript of uridine monophosphate synthetase, human

TSL 1 (best)

Gene UMPS, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UMPS-209	ENST00000497791	YBX3	P16989	372 aa	Known RBP eCLIP	18.47	■□□□□ 0.55	4e-9	■□□□□ 11.3
UMPS-209	ENST00000497791	AAMP	Q13685	434 aa		18.47	■□□□□ 0.55
UMPS-209	ENST00000497791	HELB	Q8NG08	1087 aa	Predicted RBP	18.47	■□□□□ 0.55
UMPS-209	ENST00000497791	CNNM1	Q9NRU3	951 aa		18.47	■□□□□ 0.55
UMPS-209	ENST00000497791	EXOC6B	Q9Y2D4	811 aa		18.47	■□□□□ 0.55
UMPS-209	ENST00000497791	RIPOR2	Q9Y4F9	1068 aa		18.47	■□□□□ 0.55
UMPS-209	ENST00000497791	FER1L6	Q2WGJ9	1857 aa		18.47	■□□□□ 0.55
UMPS-209	ENST00000497791	SNED1	Q8TER0	1413 aa		18.47	■□□□□ 0.55
UMPS-209	ENST00000497791	SNAP23	O00161	211 aa		18.47	■□□□□ 0.55
UMPS-209	ENST00000497791	EYA2	O00167	538 aa		18.47	■□□□□ 0.55
UMPS-209	ENST00000497791	MINPP1	Q9UNW1	487 aa		18.47	■□□□□ 0.55
UMPS-209	ENST00000497791	ATP6V0A2	Q9Y487	856 aa		18.47	■□□□□ 0.55
UMPS-209	ENST00000497791	DUOX1	Q9NRD9	1551 aa		18.46	■□□□□ 0.55
UMPS-209	ENST00000497791	SURF6	O75683	361 aa	Known RBP	18.46	■□□□□ 0.55
UMPS-209	ENST00000497791	CCDC88A	Q3V6T2	1871 aa		18.45	■□□□□ 0.54
UMPS-209	ENST00000497791	GPSM2	P81274	684 aa		18.45	■□□□□ 0.54
UMPS-209	ENST00000497791	PELP1	Q8IZL8	1130 aa	Known RBP	18.45	■□□□□ 0.54
UMPS-209	ENST00000497791	HMMR	O75330	724 aa		18.44	■□□□□ 0.54
UMPS-209	ENST00000497791	TAF5L	O75529	589 aa		18.44	■□□□□ 0.54
UMPS-209	ENST00000497791	CHRND	Q07001	517 aa		18.44	■□□□□ 0.54
UMPS-209	ENST00000497791	SP8	Q8IXZ3	490 aa		18.44	■□□□□ 0.54
UMPS-209	ENST00000497791	GPR101	Q96P66	508 aa	Predicted RBP	18.44	■□□□□ 0.54
UMPS-209	ENST00000497791	NOP58	Q9Y2X3	529 aa	Known RBP	18.44	■□□□□ 0.54
UMPS-209	ENST00000497791	APBB1	O00213	710 aa		18.44	■□□□□ 0.54
UMPS-209	ENST00000497791	SASH1	O94885	1247 aa		18.44	■□□□□ 0.54
UMPS-209	ENST00000497791	HDAC1	Q13547	482 aa	Predicted RBP	18.44	■□□□□ 0.54
UMPS-209	ENST00000497791	VGLL2	Q8N8G2	317 aa		18.44	■□□□□ 0.54
UMPS-209	ENST00000497791	CIAO1	O76071	339 aa		18.43	■□□□□ 0.54
UMPS-209	ENST00000497791	TFCP2	Q12800	502 aa		18.42	■□□□□ 0.54
UMPS-209	ENST00000497791	METTL24	Q5JXM2	366 aa		18.42	■□□□□ 0.54
UMPS-209	ENST00000497791	IL15	P40933	162 aa	Predicted RBP	18.41	■□□□□ 0.54
UMPS-209	ENST00000497791	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.41	■□□□□ 0.54	7e-7	■■■■□ 21.8
UMPS-209	ENST00000497791	TMC4	Q7Z404	712 aa		18.41	■□□□□ 0.54
UMPS-209	ENST00000497791	DCTPP1	Q9H773	170 aa		18.41	■□□□□ 0.54
UMPS-209	ENST00000497791	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.41	■□□□□ 0.54
UMPS-209	ENST00000497791	SBF1	O95248	1867 aa		18.41	■□□□□ 0.54
UMPS-209	ENST00000497791	NFKBIE	O00221	500 aa		18.41	■□□□□ 0.54
UMPS-209	ENST00000497791	SMARCA5	O60264	1052 aa	Predicted RBP	18.41	■□□□□ 0.54
UMPS-209	ENST00000497791	KLRK1	P26718	216 aa		18.41	■□□□□ 0.54
UMPS-209	ENST00000497791	OS9	Q13438	667 aa	Predicted RBP	18.41	■□□□□ 0.54
UMPS-209	ENST00000497791	ANKIB1	Q9P2G1	1089 aa		18.41	■□□□□ 0.54
UMPS-209	ENST00000497791	POLL	Q9UGP5	575 aa		18.41	■□□□□ 0.54
UMPS-209	ENST00000497791	CCDC93	Q567U6	631 aa		18.4	■□□□□ 0.54
UMPS-209	ENST00000497791	BCL11A	Q9H165	835 aa		18.4	■□□□□ 0.54
UMPS-209	ENST00000497791	XDH	P47989	1333 aa		18.39	■□□□□ 0.53
UMPS-209	ENST00000497791	MROH5	Q6ZUA9	1318 aa		18.39	■□□□□ 0.53
UMPS-209	ENST00000497791	PRELP	P51888	382 aa		18.39	■□□□□ 0.53
UMPS-209	ENST00000497791	RASSF7	Q02833	373 aa		18.39	■□□□□ 0.53
UMPS-209	ENST00000497791	B4GALNT3	Q6L9W6	998 aa		18.39	■□□□□ 0.53
UMPS-209	ENST00000497791	MPND	Q8N594	471 aa		18.39	■□□□□ 0.53
UMPS-209	ENST00000497791	RWDD1	Q9H446	243 aa	Predicted RBP	18.39	■□□□□ 0.53
UMPS-209	ENST00000497791	FBXO3	Q9UK99	471 aa		18.39	■□□□□ 0.53
UMPS-209	ENST00000497791	DPP8	Q6V1X1	898 aa	Predicted RBP	18.38	■□□□□ 0.53
UMPS-209	ENST00000497791	TBC1D16	Q8TBP0	767 aa		18.38	■□□□□ 0.53
UMPS-209	ENST00000497791	IL1RAPL2	Q9NP60	686 aa		18.38	■□□□□ 0.53
UMPS-209	ENST00000497791	PODXL2	Q9NZ53	605 aa		18.38	■□□□□ 0.53
UMPS-209	ENST00000497791	CHD4	Q14839	1912 aa		18.38	■□□□□ 0.53
UMPS-209	ENST00000497791	UFL1	O94874	794 aa		18.38	■□□□□ 0.53
UMPS-209	ENST00000497791	PDE8B	O95263	885 aa		18.38	■□□□□ 0.53
UMPS-209	ENST00000497791	GPR162	Q16538	588 aa		18.38	■□□□□ 0.53
UMPS-209	ENST00000497791	RHPN1	Q8TCX5	695 aa		18.38	■□□□□ 0.53
UMPS-209	ENST00000497791	ARAP2	Q8WZ64	1704 aa		18.38	■□□□□ 0.53
UMPS-209	ENST00000497791	COL4A5	P29400	1685 aa		18.37	■□□□□ 0.53
UMPS-209	ENST00000497791	TXNRD3	Q86VQ6	643 aa		18.37	■□□□□ 0.53
UMPS-209	ENST00000497791	ANKRD2	Q9GZV1	360 aa		18.37	■□□□□ 0.53
UMPS-209	ENST00000497791	CEP126	Q9P2H0	1117 aa		18.37	■□□□□ 0.53
UMPS-209	ENST00000497791	KDM2B	Q8NHM5	1336 aa		18.36	■□□□□ 0.53
UMPS-209	ENST00000497791	IRS2	Q9Y4H2	1338 aa		18.36	■□□□□ 0.53
UMPS-209	ENST00000497791	FGFR2	P21802	821 aa		18.36	■□□□□ 0.53
UMPS-209	ENST00000497791	CC2D2B	Q6DHV5	1058 aa		18.36	■□□□□ 0.53
UMPS-209	ENST00000497791	ARHGAP27	Q6ZUM4	889 aa		18.36	■□□□□ 0.53
UMPS-209	ENST00000497791	SMC5	Q8IY18	1101 aa		18.36	■□□□□ 0.53
UMPS-209	ENST00000497791	GGA1	Q9UJY5	639 aa		18.36	■□□□□ 0.53
UMPS-209	ENST00000497791	ZNF804B	A4D1E1	1349 aa		18.36	■□□□□ 0.53
UMPS-209	ENST00000497791	ZNF609	O15014	1411 aa		18.35	■□□□□ 0.53
UMPS-209	ENST00000497791	C6orf229	H3BNL8	230 aa		18.35	■□□□□ 0.53
UMPS-209	ENST00000497791	TIMM10	P62072	90 aa		18.35	■□□□□ 0.53
UMPS-209	ENST00000497791	ERICH6B	Q5W0A0	696 aa		18.35	■□□□□ 0.53
UMPS-209	ENST00000497791	RTKN2	Q8IZC4	609 aa		18.35	■□□□□ 0.53
UMPS-209	ENST00000497791	TMX4	Q9H1E5	349 aa	Predicted RBP	18.35	■□□□□ 0.53
UMPS-209	ENST00000497791	ZNF277	Q9NRM2	450 aa	Predicted RBP	18.35	■□□□□ 0.53
UMPS-209	ENST00000497791	ADORA1	P30542	326 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	SOGA3	Q5TF21	947 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	EAF2	Q96CJ1	260 aa	Predicted RBP	18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	CCDC136	Q96JN2	1154 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	RTFDC1	Q9BY42	306 aa	Predicted RBP	18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	PPP4R2	Q9NY27	417 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	SCN9A	Q15858	1988 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	RIMBP2	O15034	1052 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	RAB11FIP3	O75154	756 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	ATP2B4	P23634	1241 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	FKBP4	Q02790	459 aa	Known RBP eCLIP	18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	PUM3	Q15397	648 aa	Known RBP	18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	ATP2B3	Q16720	1220 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	HSP90AB4P	Q58FF6	505 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	TNNI3K	Q59H18	835 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	ERC1	Q8IUD2	1116 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	KIF1BP	Q96EK5	621 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	PSMD1	Q99460	953 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	LRRCC1	Q9C099	1032 aa		18.34	■□□□□ 0.53

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