RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 C6orf229H3BNL8 230 aa20.38■□□□□ 0.85
DNMT3A-215ENST00000496570 CXCL9Q07325 125 aa20.38■□□□□ 0.85
DNMT3A-215ENST00000496570 WASHC4Q2M389 1173 aa20.38■□□□□ 0.85
DNMT3A-215ENST00000496570 ARHGAP45Q92619 1136 aa20.38■□□□□ 0.85
DNMT3A-215ENST00000496570 ANKIB1Q9P2G1 1089 aa20.38■□□□□ 0.85
DNMT3A-215ENST00000496570 A0A1B0GUL6 1792 aa20.38■□□□□ 0.85
DNMT3A-215ENST00000496570 UFL1O94874 794 aa20.37■□□□□ 0.85
DNMT3A-215ENST00000496570 EIF6P56537 245 aaKnown RBP20.37■□□□□ 0.85
DNMT3A-215ENST00000496570 RABL6Q3YEC7 729 aaPredicted RBP20.37■□□□□ 0.85
DNMT3A-215ENST00000496570 ANKRD44Q8N8A2 993 aa20.37■□□□□ 0.85
DNMT3A-215ENST00000496570 API5Q9BZZ5 524 aaKnown RBP20.37■□□□□ 0.85
DNMT3A-215ENST00000496570 GGA1Q9UJY5 639 aa20.37■□□□□ 0.85
DNMT3A-215ENST00000496570 TNNQ9UQP3 1299 aa20.37■□□□□ 0.85
DNMT3A-215ENST00000496570 KIF16BQ96L93 1317 aa20.36■□□□□ 0.85
DNMT3A-215ENST00000496570 ANKRD18BA2A2Z9 1011 aa20.36■□□□□ 0.85
DNMT3A-215ENST00000496570 RIMBP2O15034 1052 aa20.36■□□□□ 0.85
DNMT3A-215ENST00000496570 POTEIP0CG38 1075 aa20.36■□□□□ 0.85
DNMT3A-215ENST00000496570 POTEJP0CG39 1038 aa20.36■□□□□ 0.85
DNMT3A-215ENST00000496570 IGHMBP2P38935 993 aaKnown RBP20.36■□□□□ 0.85
DNMT3A-215ENST00000496570 BICC1Q9H694 974 aaKnown RBP20.36■□□□□ 0.85
DNMT3A-215ENST00000496570 ADAMTSL1Q8N6G6 1762 aa20.36■□□□□ 0.85
DNMT3A-215ENST00000496570 SCNN1DP51172 638 aa20.35■□□□□ 0.85
DNMT3A-215ENST00000496570 IFIT5Q13325 482 aaKnown RBP20.35■□□□□ 0.85
DNMT3A-215ENST00000496570 ZNF594Q96JF6 807 aaPredicted RBP20.35■□□□□ 0.85
DNMT3A-215ENST00000496570 TAF1DQ9H5J8 278 aaPredicted RBP20.35■□□□□ 0.85
DNMT3A-215ENST00000496570 DBNDD1Q9H9R9 158 aa20.35■□□□□ 0.85
DNMT3A-215ENST00000496570 GJA3Q9Y6H8 435 aa20.35■□□□□ 0.85
DNMT3A-215ENST00000496570 SCN9AQ15858 1988 aa20.35■□□□□ 0.85
DNMT3A-215ENST00000496570 TRIM27P14373 513 aa20.34■□□□□ 0.85
DNMT3A-215ENST00000496570 CCT4P50991 539 aaKnown RBP20.34■□□□□ 0.85
DNMT3A-215ENST00000496570 C16orf71Q8IYS4 520 aaPredicted RBP20.34■□□□□ 0.85
DNMT3A-215ENST00000496570 EYA3Q99504 573 aa20.34■□□□□ 0.85
DNMT3A-215ENST00000496570 KCNQ5Q9NR82 932 aa20.34■□□□□ 0.85
DNMT3A-215ENST00000496570 CHMP3Q9Y3E7 222 aa20.34■□□□□ 0.85
DNMT3A-215ENST00000496570 IQCA1LA6NCM1 817 aa20.33■□□□□ 0.85
DNMT3A-215ENST00000496570 RAD17O75943 681 aa20.33■□□□□ 0.85
DNMT3A-215ENST00000496570 ATP2B4P23634 1241 aa20.33■□□□□ 0.85
DNMT3A-215ENST00000496570 DOK7Q18PE1 504 aa20.33■□□□□ 0.85
DNMT3A-215ENST00000496570 ECE2O60344 883 aa20.32■□□□□ 0.84
DNMT3A-215ENST00000496570 CHRNDQ07001 517 aa20.32■□□□□ 0.84
DNMT3A-215ENST00000496570 FSTL1Q12841 308 aa20.32■□□□□ 0.84
DNMT3A-215ENST00000496570 INTS3Q68E01 1043 aaKnown RBP20.32■□□□□ 0.84
DNMT3A-215ENST00000496570 CIAPIN1Q6FI81 312 aa20.32■□□□□ 0.84
DNMT3A-215ENST00000496570 MPHOSPH8Q99549 860 aa20.32■□□□□ 0.84
DNMT3A-215ENST00000496570 HACL1Q9UJ83 578 aa20.32■□□□□ 0.84
DNMT3A-215ENST00000496570 IRS2Q9Y4H2 1338 aa20.31■□□□□ 0.84
DNMT3A-215ENST00000496570 CEP350Q5VT06 3117 aa20.31■□□□□ 0.84
DNMT3A-215ENST00000496570 EPS15P42566 896 aa20.31■□□□□ 0.84
DNMT3A-215ENST00000496570 CCDC57Q2TAC2 916 aa20.31■□□□□ 0.84
DNMT3A-215ENST00000496570 ATF7IPQ6VMQ6 1270 aa20.31■□□□□ 0.84
DNMT3A-215ENST00000496570 TXNRD3Q86VQ6 643 aa20.31■□□□□ 0.84
DNMT3A-215ENST00000496570 ZC3H12CQ9C0D7 883 aaKnown RBP20.31■□□□□ 0.84
DNMT3A-215ENST00000496570 ZNF646O15015 1829 aaPredicted RBP20.31■□□□□ 0.84
DNMT3A-215ENST00000496570 MED23Q9ULK4 1368 aa20.31■□□□□ 0.84
DNMT3A-215ENST00000496570 SNAP23O00161 211 aa20.3■□□□□ 0.84
DNMT3A-215ENST00000496570 HSPA6P17066 643 aa20.3■□□□□ 0.84
DNMT3A-215ENST00000496570 KLRK1P26718 216 aa20.3■□□□□ 0.84
DNMT3A-215ENST00000496570 EPHX2P34913 555 aa20.3■□□□□ 0.84
DNMT3A-215ENST00000496570 SMC1BQ8NDV3 1235 aa20.3■□□□□ 0.84
DNMT3A-215ENST00000496570 PSME4Q14997 1843 aa20.3■□□□□ 0.84
DNMT3A-215ENST00000496570 PSMD14O00487 310 aa20.29■□□□□ 0.84
DNMT3A-215ENST00000496570 GMPSP49915 693 aaPredicted RBP20.29■□□□□ 0.84
DNMT3A-215ENST00000496570 HELBQ8NG08 1087 aaPredicted RBP20.29■□□□□ 0.84
DNMT3A-215ENST00000496570 FRAT1Q92837 279 aaPredicted RBP20.29■□□□□ 0.84
DNMT3A-215ENST00000496570 MEIS3Q99687 375 aa20.29■□□□□ 0.84
DNMT3A-215ENST00000496570 PUS3Q9BZE2 481 aaKnown RBP20.29■□□□□ 0.84
DNMT3A-215ENST00000496570 ANKRD2Q9GZV1 360 aa20.29■□□□□ 0.84
DNMT3A-215ENST00000496570 GPRC5DQ9NZD1 345 aa20.29■□□□□ 0.84
DNMT3A-215ENST00000496570 LEMD3Q9Y2U8 911 aa20.29■□□□□ 0.84
DNMT3A-215ENST00000496570 ZNF804BA4D1E1 1349 aa20.28■□□□□ 0.84
DNMT3A-215ENST00000496570 IPO8O15397 1037 aaKnown RBP20.28■□□□□ 0.84
DNMT3A-215ENST00000496570 TAF5LO75529 589 aa20.28■□□□□ 0.84
DNMT3A-215ENST00000496570 RFX5P48382 616 aaPredicted RBP20.28■□□□□ 0.84
DNMT3A-215ENST00000496570 TNIP1Q15025 636 aa20.28■□□□□ 0.84
DNMT3A-215ENST00000496570 LDHAL6AQ6ZMR3 332 aa20.28■□□□□ 0.84
DNMT3A-215ENST00000496570 SHTN1A0MZ66 631 aa20.27■□□□□ 0.84
DNMT3A-215ENST00000496570 ZBTB12Q9Y330 459 aaPredicted RBP20.27■□□□□ 0.84
DNMT3A-215ENST00000496570 RIPOR2Q9Y4F9 1068 aa20.27■□□□□ 0.84
DNMT3A-215ENST00000496570 UBTFL1P0CB47 393 aaPredicted RBP20.26■□□□□ 0.83
DNMT3A-215ENST00000496570 CHADLQ6NUI6 762 aa20.26■□□□□ 0.83
DNMT3A-215ENST00000496570 LDHDQ86WU2 507 aa20.26■□□□□ 0.83
DNMT3A-215ENST00000496570 KLHDC4Q8TBB5 520 aa20.26■□□□□ 0.83
DNMT3A-215ENST00000496570 CLUAP1Q96AJ1 413 aa20.26■□□□□ 0.83
DNMT3A-215ENST00000496570 VIL1P09327 827 aaKnown RBP20.25■□□□□ 0.83
DNMT3A-215ENST00000496570 LMOD1P29536 600 aaPredicted RBP20.25■□□□□ 0.83
DNMT3A-215ENST00000496570 EAPPQ56P03 285 aaPredicted RBP20.25■□□□□ 0.83
DNMT3A-215ENST00000496570 TAF7LQ5H9L4 462 aa20.25■□□□□ 0.83
DNMT3A-215ENST00000496570 ZKSCAN2Q63HK3 967 aa20.25■□□□□ 0.83
DNMT3A-215ENST00000496570 C15orf52Q6ZUT6 534 aaKnown RBP20.25■□□□□ 0.83
DNMT3A-215ENST00000496570 LRRFIP2Q9Y608 721 aaKnown RBP20.25■□□□□ 0.83
DNMT3A-215ENST00000496570 ZNF609O15014 1411 aa20.25■□□□□ 0.83
DNMT3A-215ENST00000496570 LRRC24Q50LG9 513 aa20.24■□□□□ 0.83
DNMT3A-215ENST00000496570 PNMA8AQ86V59 439 aaPredicted RBP20.24■□□□□ 0.83
DNMT3A-215ENST00000496570 DPF2Q92785 391 aa20.24■□□□□ 0.83
DNMT3A-215ENST00000496570 CNNM1Q9NRU3 951 aa20.24■□□□□ 0.83
DNMT3A-215ENST00000496570 RLBP1P12271 317 aa20.23■□□□□ 0.83
DNMT3A-215ENST00000496570 PODNQ7Z5L7 613 aa20.23■□□□□ 0.83
DNMT3A-215ENST00000496570 TMEM57Q8N5G2 664 aa20.23■□□□□ 0.83
DNMT3A-215ENST00000496570 ITGBL1O95965 494 aaPredicted RBP20.22■□□□□ 0.83
DNMT3A-215ENST00000496570 HIRAP54198 1017 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms