RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 C9orf78Q9NZ63 289 aaPredicted RBP21.6■■□□□ 1.05
COMMD3-214ENST00000496071 GGA1Q9UJY5 639 aa21.6■■□□□ 1.05
COMMD3-214ENST00000496071 XDHP47989 1333 aa21.59■■□□□ 1.05
COMMD3-214ENST00000496071 RIMBP2O15034 1052 aa21.59■■□□□ 1.05
COMMD3-214ENST00000496071 IGHMBP2P38935 993 aaKnown RBP21.59■■□□□ 1.05
COMMD3-214ENST00000496071 UFL1O94874 794 aa21.58■■□□□ 1.05
COMMD3-214ENST00000496071 ITGA6P23229 1130 aa21.58■■□□□ 1.05
COMMD3-214ENST00000496071 ATP2B4P23634 1241 aa21.58■■□□□ 1.05
COMMD3-214ENST00000496071 EAPPQ56P03 285 aaPredicted RBP21.58■■□□□ 1.05
COMMD3-214ENST00000496071 SCNN1DP51172 638 aa21.57■■□□□ 1.04
COMMD3-214ENST00000496071 SMC4Q9NTJ3 1288 aa21.57■■□□□ 1.04
COMMD3-214ENST00000496071 MINPP1Q9UNW1 487 aa21.57■■□□□ 1.04
COMMD3-214ENST00000496071 SPEF2Q9C093 1822 aa21.57■■□□□ 1.04
COMMD3-214ENST00000496071 ANKRD18BA2A2Z9 1011 aa21.56■■□□□ 1.04
COMMD3-214ENST00000496071 G3V3G9 751 aa21.56■■□□□ 1.04
COMMD3-214ENST00000496071 RAD17O75943 681 aa21.56■■□□□ 1.04
COMMD3-214ENST00000496071 POTEIP0CG38 1075 aa21.56■■□□□ 1.04
COMMD3-214ENST00000496071 POTEJP0CG39 1038 aa21.56■■□□□ 1.04
COMMD3-214ENST00000496071 FOXO4P98177 505 aa21.56■■□□□ 1.04
COMMD3-214ENST00000496071 FAM161AQ3B820 660 aa21.56■■□□□ 1.04
COMMD3-214ENST00000496071 DCAF8Q5TAQ9 597 aa21.56■■□□□ 1.04
COMMD3-214ENST00000496071 MPHOSPH8Q99549 860 aa21.56■■□□□ 1.04
COMMD3-214ENST00000496071 DBNDD1Q9H9R9 158 aa21.56■■□□□ 1.04
COMMD3-214ENST00000496071 CLEC11AQ9Y240 323 aa21.56■■□□□ 1.04
COMMD3-214ENST00000496071 YDJCA8MPS7 323 aa21.55■■□□□ 1.04
COMMD3-214ENST00000496071 BCL2L13Q9BXK5 485 aa21.55■■□□□ 1.04
COMMD3-214ENST00000496071 GPRC5DQ9NZD1 345 aa21.55■■□□□ 1.04
COMMD3-214ENST00000496071 ECE2O60344 883 aa21.54■■□□□ 1.04
COMMD3-214ENST00000496071 EPS15P42566 896 aa21.54■■□□□ 1.04
COMMD3-214ENST00000496071 IFIT5Q13325 482 aaKnown RBP21.54■■□□□ 1.04
COMMD3-214ENST00000496071 USP50Q70EL3 339 aaPredicted RBP21.54■■□□□ 1.04
COMMD3-214ENST00000496071 ANKRD2Q9GZV1 360 aa21.54■■□□□ 1.04
COMMD3-214ENST00000496071 ADAMTSL1Q8N6G6 1762 aa21.53■■□□□ 1.04
COMMD3-214ENST00000496071 GMPSP49915 693 aaPredicted RBP21.53■■□□□ 1.04
COMMD3-214ENST00000496071 BRPF1P55201 1214 aaPredicted RBP21.53■■□□□ 1.04
COMMD3-214ENST00000496071 DOK7Q18PE1 504 aa21.53■■□□□ 1.04
COMMD3-214ENST00000496071 LMBR1LQ6UX01 489 aa21.53■■□□□ 1.04
COMMD3-214ENST00000496071 GPR101Q96P66 508 aaPredicted RBP21.53■■□□□ 1.04
COMMD3-214ENST00000496071 ADARB2Q9NS39 739 aaKnown RBP21.53■■□□□ 1.04
COMMD3-214ENST00000496071 CHMP3Q9Y3E7 222 aa21.53■■□□□ 1.04
COMMD3-214ENST00000496071 UTYO14607 1347 aa21.53■■□□□ 1.04
COMMD3-214ENST00000496071 CCT4P50991 539 aaKnown RBP21.52■■□□□ 1.04
COMMD3-214ENST00000496071 LEMD3Q9Y2U8 911 aa21.52■■□□□ 1.04
COMMD3-214ENST00000496071 HNRNPUQ00839 825 aaKnown RBP eCLIP21.51■■□□□ 1.03
COMMD3-214ENST00000496071 CCDC57Q2TAC2 916 aa21.51■■□□□ 1.03
COMMD3-214ENST00000496071 DPF2Q92785 391 aa21.51■■□□□ 1.03
COMMD3-214ENST00000496071 PSMD14O00487 310 aa21.5■■□□□ 1.03
COMMD3-214ENST00000496071 NBPF7P0C2Y1 421 aaPredicted RBP21.5■■□□□ 1.03
COMMD3-214ENST00000496071 RPS12P25398 132 aaKnown RBP21.5■■□□□ 1.03
COMMD3-214ENST00000496071 EPHA10Q5JZY3 1008 aa21.5■■□□□ 1.03
COMMD3-214ENST00000496071 DNAJC5GQ8N7S2 189 aa21.5■■□□□ 1.03
COMMD3-214ENST00000496071 MED23Q9ULK4 1368 aa21.49■■□□□ 1.03
COMMD3-214ENST00000496071 H7C1D1 291 aa21.49■■□□□ 1.03
COMMD3-214ENST00000496071 RARSP54136 660 aaKnown RBP21.49■■□□□ 1.03
COMMD3-214ENST00000496071 PODNQ7Z5L7 613 aa21.49■■□□□ 1.03
COMMD3-214ENST00000496071 CNTROBQ8N137 903 aa21.49■■□□□ 1.03
COMMD3-214ENST00000496071 SUCLG2Q96I99 432 aa21.49■■□□□ 1.03
COMMD3-214ENST00000496071 CNOT7Q9UIV1 285 aaKnown RBP21.49■■□□□ 1.03
COMMD3-214ENST00000496071 ITGBL1O95965 494 aaPredicted RBP21.48■■□□□ 1.03
COMMD3-214ENST00000496071 CHRNDQ07001 517 aa21.48■■□□□ 1.03
COMMD3-214ENST00000496071 TAF7LQ5H9L4 462 aa21.48■■□□□ 1.03
COMMD3-214ENST00000496071 API5Q9BZZ5 524 aaKnown RBP21.48■■□□□ 1.03
COMMD3-214ENST00000496071 NOB1Q9ULX3 412 aaKnown RBP21.48■■□□□ 1.03
COMMD3-214ENST00000496071 PASKQ96RG2 1323 aa21.48■■□□□ 1.03
COMMD3-214ENST00000496071 VIL1P09327 827 aaKnown RBP21.47■■□□□ 1.03
COMMD3-214ENST00000496071 HTRA3P83110 453 aa21.47■■□□□ 1.03
COMMD3-214ENST00000496071 KCNQ5Q9NR82 932 aa21.47■■□□□ 1.03
COMMD3-214ENST00000496071 ZBTB12Q9Y330 459 aaPredicted RBP21.47■■□□□ 1.03
COMMD3-214ENST00000496071 ZNF804BA4D1E1 1349 aa21.47■■□□□ 1.03
COMMD3-214ENST00000496071 KCNJ4P48050 445 aa21.46■■□□□ 1.03
COMMD3-214ENST00000496071 MAP1SQ66K74 1059 aaPredicted RBP21.46■■□□□ 1.03
COMMD3-214ENST00000496071 LDHAL6AQ6ZMR3 332 aa21.46■■□□□ 1.03
COMMD3-214ENST00000496071 KAZALD1Q96I82 304 aa21.46■■□□□ 1.03
COMMD3-214ENST00000496071 USP44Q9H0E7 712 aa21.46■■□□□ 1.03
COMMD3-214ENST00000496071 CREBZFQ9NS37 354 aa21.46■■□□□ 1.03
COMMD3-214ENST00000496071 SCN9AQ15858 1988 aa21.46■■□□□ 1.03
COMMD3-214ENST00000496071 KIF16BQ96L93 1317 aa21.46■■□□□ 1.03
COMMD3-214ENST00000496071 PSME4Q14997 1843 aa21.45■■□□□ 1.03
COMMD3-214ENST00000496071 MICALL2Q8IY33 904 aa21.45■■□□□ 1.02
COMMD3-214ENST00000496071 ZC3H15Q8WU90 426 aaKnown RBP21.45■■□□□ 1.02
COMMD3-214ENST00000496071 ARHGAP45Q92619 1136 aa21.45■■□□□ 1.02
COMMD3-214ENST00000496071 KLRG1Q96E93 195 aa21.45■■□□□ 1.02
COMMD3-214ENST00000496071 COA1Q9GZY4 146 aa21.45■■□□□ 1.02
COMMD3-214ENST00000496071 WTIPA6NIX2 430 aaPredicted RBP21.44■■□□□ 1.02
COMMD3-214ENST00000496071 RABL6Q3YEC7 729 aaPredicted RBP21.44■■□□□ 1.02
COMMD3-214ENST00000496071 BICC1Q9H694 974 aaKnown RBP21.44■■□□□ 1.02
COMMD3-214ENST00000496071 CNNM1Q9NRU3 951 aa21.44■■□□□ 1.02
COMMD3-214ENST00000496071 PGAP2Q9UHJ9 254 aa21.44■■□□□ 1.02
COMMD3-214ENST00000496071 USP17L3A6NCW0 530 aa21.43■■□□□ 1.02
COMMD3-214ENST00000496071 USP17L4A6NCW7 530 aa21.43■■□□□ 1.02
COMMD3-214ENST00000496071 USP17L1Q7RTZ2 530 aa21.43■■□□□ 1.02
COMMD3-214ENST00000496071 AGBL3Q8NEM8 1001 aa21.43■■□□□ 1.02
COMMD3-214ENST00000496071 ZNF594Q96JF6 807 aaPredicted RBP21.43■■□□□ 1.02
COMMD3-214ENST00000496071 ZNF609O15014 1411 aa21.43■■□□□ 1.02
COMMD3-214ENST00000496071 CEP350Q5VT06 3117 aa21.43■■□□□ 1.02
COMMD3-214ENST00000496071 TMEM88BA6NKF7 163 aa21.42■■□□□ 1.02
COMMD3-214ENST00000496071 IPO8O15397 1037 aaKnown RBP21.42■■□□□ 1.02
COMMD3-214ENST00000496071 RSBN1LQ6PCB5 846 aaPredicted RBP21.42■■□□□ 1.02
COMMD3-214ENST00000496071 HDAC5Q9UQL6 1122 aa21.42■■□□□ 1.02
COMMD3-214ENST00000496071 A0A1B0GUL6 1792 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms