RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 EHD4Q9H223 541 aa8.7□□□□□ -1.02
SSR3-208ENST00000496050 KANSL3Q9P2N6 904 aa8.7□□□□□ -1.02
SSR3-208ENST00000496050 CDC14CA4D256 554 aa8.69□□□□□ -1.02
SSR3-208ENST00000496050 CTSHP09668 335 aa8.69□□□□□ -1.02
SSR3-208ENST00000496050 VEGFBP49765 207 aa8.69□□□□□ -1.02
SSR3-208ENST00000496050 GRIN2CQ14957 1233 aa8.69□□□□□ -1.02
SSR3-208ENST00000496050 TAF1CQ15572 869 aaPredicted RBP8.69□□□□□ -1.02
SSR3-208ENST00000496050 PCSK7Q16549 785 aa8.69□□□□□ -1.02
SSR3-208ENST00000496050 C9orf131Q5VYM1 1079 aa8.69□□□□□ -1.02
SSR3-208ENST00000496050 Q6ZNB5 142 aa8.69□□□□□ -1.02
SSR3-208ENST00000496050 DHX32Q7L7V1 743 aaKnown RBP8.69□□□□□ -1.02
SSR3-208ENST00000496050 SPACA7Q96KW9 195 aa8.69□□□□□ -1.02
SSR3-208ENST00000496050 A0A1W2PP55 124 aa8.68□□□□□ -1.02
SSR3-208ENST00000496050 NANOS1Q8WY41 292 aaKnown RBP8.68□□□□□ -1.02
SSR3-208ENST00000496050 HCN2Q9UL51 889 aa8.68□□□□□ -1.02
SSR3-208ENST00000496050 USP31Q70CQ4 1352 aa8.68□□□□□ -1.02
SSR3-208ENST00000496050 GSTT1P30711 240 aa8.67□□□□□ -1.02
SSR3-208ENST00000496050 NRLP54845 237 aa8.67□□□□□ -1.02
SSR3-208ENST00000496050 ZC3H6P61129 1189 aaKnown RBP8.67□□□□□ -1.02
SSR3-208ENST00000496050 FANCCQ00597 558 aa8.67□□□□□ -1.02
SSR3-208ENST00000496050 CTBSQ01459 385 aa8.67□□□□□ -1.02
SSR3-208ENST00000496050 GRM2Q14416 872 aa8.67□□□□□ -1.02
SSR3-208ENST00000496050 NT5DC4Q86YG4 428 aa8.67□□□□□ -1.02
SSR3-208ENST00000496050 C8orf37Q96NL8 207 aa8.67□□□□□ -1.02
SSR3-208ENST00000496050 KIF4AO95239 1232 aa8.66□□□□□ -1.02
SSR3-208ENST00000496050 USP17L7P0C7H9 530 aa8.66□□□□□ -1.02
SSR3-208ENST00000496050 XRCC5P13010 732 aaKnown RBP8.66□□□□□ -1.02
SSR3-208ENST00000496050 HOXD8P13378 290 aaPredicted RBP8.66□□□□□ -1.02
SSR3-208ENST00000496050 PEAR1Q5VY43 1037 aaPredicted RBP8.66□□□□□ -1.02
SSR3-208ENST00000496050 RAB44Q7Z6P3 723 aaPredicted RBP8.66□□□□□ -1.02
SSR3-208ENST00000496050 METTL16Q86W50 562 aaKnown RBP8.66□□□□□ -1.02
SSR3-208ENST00000496050 ZFYVE1Q9HBF4 777 aa8.66□□□□□ -1.02
SSR3-208ENST00000496050 LOC102724428A0A0B4J2F2 783 aa8.65□□□□□ -1.02
SSR3-208ENST00000496050 GPR25O00155 361 aa8.65□□□□□ -1.02
SSR3-208ENST00000496050 BMP4P12644 408 aa8.65□□□□□ -1.02
SSR3-208ENST00000496050 ST13P50502 369 aaKnown RBP8.65□□□□□ -1.02
SSR3-208ENST00000496050 SIK1P57059 783 aa8.65□□□□□ -1.02
SSR3-208ENST00000496050 CEP120Q8N960 986 aa8.65□□□□□ -1.02
SSR3-208ENST00000496050 TRPM4Q8TD43 1214 aa8.65□□□□□ -1.02
SSR3-208ENST00000496050 OSMRQ99650 979 aa8.65□□□□□ -1.02
SSR3-208ENST00000496050 IGFLR1Q9H665 355 aa8.65□□□□□ -1.02
SSR3-208ENST00000496050 LIN7BQ9HAP6 207 aa8.65□□□□□ -1.02
SSR3-208ENST00000496050 LATS2Q9NRM7 1088 aa8.65□□□□□ -1.02
SSR3-208ENST00000496050 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.65□□□□□ -1.02
SSR3-208ENST00000496050 RBSNQ9H1K0 784 aa8.64□□□□□ -1.03
SSR3-208ENST00000496050 TMEM238LA0A1B0GVL6 79 aa8.63□□□□□ -1.03
SSR3-208ENST00000496050 GPLD1P80108 840 aa8.63□□□□□ -1.03
SSR3-208ENST00000496050 COL13A1Q5TAT6 717 aaPredicted RBP8.63□□□□□ -1.03
SSR3-208ENST00000496050 PRPF40BQ6NWY9 871 aaKnown RBP8.63□□□□□ -1.03
SSR3-208ENST00000496050 HS2ST1Q7LGA3 356 aa8.63□□□□□ -1.03
SSR3-208ENST00000496050 SYT9Q86SS6 491 aa8.63□□□□□ -1.03
SSR3-208ENST00000496050 NSUN5Q96P11 429 aaKnown RBP8.63□□□□□ -1.03
SSR3-208ENST00000496050 TGIF2Q9GZN2 237 aa8.63□□□□□ -1.03
SSR3-208ENST00000496050 AVENQ9NQS1 362 aaPredicted RBP8.63□□□□□ -1.03
SSR3-208ENST00000496050 DZANK1Q9NVP4 752 aa8.63□□□□□ -1.03
SSR3-208ENST00000496050 NSFL1CQ9UNZ2 370 aaKnown RBP8.63□□□□□ -1.03
SSR3-208ENST00000496050 POTECB2RU33 542 aa8.62□□□□□ -1.03
SSR3-208ENST00000496050 SIN3BO75182 1162 aa8.62□□□□□ -1.03
SSR3-208ENST00000496050 MX2P20592 715 aa8.62□□□□□ -1.03
SSR3-208ENST00000496050 FCGRTP55899 365 aa8.62□□□□□ -1.03
SSR3-208ENST00000496050 PTPN12Q05209 780 aaKnown RBP8.62□□□□□ -1.03
SSR3-208ENST00000496050 NAALADL2Q58DX5 795 aa8.62□□□□□ -1.03
SSR3-208ENST00000496050 MEI1Q5TIA1 1274 aa8.62□□□□□ -1.03
SSR3-208ENST00000496050 ZNF468Q5VIY5 522 aaPredicted RBP8.62□□□□□ -1.03
SSR3-208ENST00000496050 DTHD1Q6ZMT9 781 aa8.62□□□□□ -1.03
SSR3-208ENST00000496050 CCNJLQ8IV13 435 aa8.62□□□□□ -1.03
SSR3-208ENST00000496050 GLIS3Q8NEA6 775 aa8.62□□□□□ -1.03
SSR3-208ENST00000496050 ZKSCAN3Q9BRR0 538 aa8.62□□□□□ -1.03
SSR3-208ENST00000496050 UBE2OQ9C0C9 1292 aaKnown RBP8.62□□□□□ -1.03
SSR3-208ENST00000496050 USP35Q9P2H5 1018 aa8.62□□□□□ -1.03
SSR3-208ENST00000496050 GGT7Q9UJ14 662 aa8.62□□□□□ -1.03
SSR3-208ENST00000496050 ZBTB42B2RXF5 422 aa8.61□□□□□ -1.03
SSR3-208ENST00000496050 J3QW42 95 aa8.61□□□□□ -1.03
SSR3-208ENST00000496050 C2CD2LO14523 706 aa8.61□□□□□ -1.03
SSR3-208ENST00000496050 GHRHP01286 108 aa8.61□□□□□ -1.03
SSR3-208ENST00000496050 TCF12Q99081 682 aa8.61□□□□□ -1.03
SSR3-208ENST00000496050 CCSER2Q9H7U1 834 aa8.61□□□□□ -1.03
SSR3-208ENST00000496050 DNAJB12Q9NXW2 375 aaKnown RBP8.61□□□□□ -1.03
SSR3-208ENST00000496050 TTF2Q9UNY4 1162 aaKnown RBP8.61□□□□□ -1.03
SSR3-208ENST00000496050 AKAP2Q9Y2D5 859 aa8.61□□□□□ -1.03
SSR3-208ENST00000496050 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.61□□□□□ -1.03
SSR3-208ENST00000496050 PCBP4P57723 403 aaKnown RBP8.6□□□□□ -1.03
SSR3-208ENST00000496050 MLLT1Q03111 559 aaPredicted RBP8.6□□□□□ -1.03
SSR3-208ENST00000496050 RAD51AP2Q09MP3 1159 aa8.6□□□□□ -1.03
SSR3-208ENST00000496050 ZNF654Q8IZM8 581 aa8.6□□□□□ -1.03
SSR3-208ENST00000496050 TMEM102Q8N9M5 508 aaPredicted RBP8.6□□□□□ -1.03
SSR3-208ENST00000496050 NXPE3Q969Y0 559 aa8.6□□□□□ -1.03
SSR3-208ENST00000496050 NOC4LQ9BVI4 516 aaKnown RBP8.6□□□□□ -1.03
SSR3-208ENST00000496050 OXCT2Q9BYC2 517 aaPredicted RBP8.6□□□□□ -1.03
SSR3-208ENST00000496050 PBX4Q9BYU1 374 aa8.6□□□□□ -1.03
SSR3-208ENST00000496050 NXF1Q9UBU9 619 aaKnown RBP8.6□□□□□ -1.03
SSR3-208ENST00000496050 PPM1HQ9ULR3 514 aa8.6□□□□□ -1.03
SSR3-208ENST00000496050 TBC1D8BQ0IIM8 1120 aa8.59□□□□□ -1.03
SSR3-208ENST00000496050 HFE2Q6ZVN8 426 aa8.59□□□□□ -1.03
SSR3-208ENST00000496050 NPAS3Q8IXF0 933 aa8.59□□□□□ -1.03
SSR3-208ENST00000496050 MICALL1Q8N3F8 863 aa8.59□□□□□ -1.03
SSR3-208ENST00000496050 C3orf58Q8NDZ4 430 aa8.59□□□□□ -1.03
SSR3-208ENST00000496050 ANKRD24Q8TF21 1146 aa8.59□□□□□ -1.03
SSR3-208ENST00000496050 CNTNAP3BQ96NU0 1288 aa8.59□□□□□ -1.03
SSR3-208ENST00000496050 CNTNAP3Q9BZ76 1288 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms