RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 CHMLP26374 656 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 C1QTNF8P60827 252 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 DDB1Q16531 1140 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 EVI5LQ96CN4 794 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 GBP4Q96PP9 640 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 USP26Q9BXU7 913 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 QTRT2Q9H974 415 aaKnown RBP8.38□□□□□ -1.07
USP39-219ENST00000496047 ANO2Q9NQ90 1003 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 TAF1LQ8IZX4 1826 aa8.38□□□□□ -1.07
USP39-219ENST00000496047 HSP90B1P14625 803 aaKnown RBP8.37□□□□□ -1.07
USP39-219ENST00000496047 LRRFIP1Q32MZ4 808 aaKnown RBP8.37□□□□□ -1.07
USP39-219ENST00000496047 TMEM92Q6UXU6 159 aa8.37□□□□□ -1.07
USP39-219ENST00000496047 COPRSQ9NQ92 184 aa8.37□□□□□ -1.07
USP39-219ENST00000496047 ZNF330Q9Y3S2 320 aaPredicted RBP8.37□□□□□ -1.07
USP39-219ENST00000496047 CCDC9Q9Y3X0 531 aaKnown RBP8.37□□□□□ -1.07
USP39-219ENST00000496047 ARIH1Q9Y4X5 557 aaPredicted RBP8.37□□□□□ -1.07
USP39-219ENST00000496047 SCN7AQ01118 1682 aa8.37□□□□□ -1.07
USP39-219ENST00000496047 TCHHQ07283 1943 aa8.37□□□□□ -1.07
USP39-219ENST00000496047 SPATA31A1Q5TZJ5 1347 aa8.36□□□□□ -1.07
USP39-219ENST00000496047 A0A1B0GUL6 1792 aa8.36□□□□□ -1.07
USP39-219ENST00000496047 SLIT2O94813 1529 aa8.36□□□□□ -1.07
USP39-219ENST00000496047 CAMK2BQ13554 666 aa8.36□□□□□ -1.07
USP39-219ENST00000496047 RABL6Q3YEC7 729 aaPredicted RBP8.36□□□□□ -1.07
USP39-219ENST00000496047 TAF7LQ5H9L4 462 aa8.36□□□□□ -1.07
USP39-219ENST00000496047 LRP10Q7Z4F1 713 aa8.36□□□□□ -1.07
USP39-219ENST00000496047 PI4K2BQ8TCG2 481 aa8.36□□□□□ -1.07
USP39-219ENST00000496047 SYTL4Q96C24 671 aaPredicted RBP8.36□□□□□ -1.07
USP39-219ENST00000496047 CWC22Q9HCG8 908 aaKnown RBP8.36□□□□□ -1.07
USP39-219ENST00000496047 MYH14Q7Z406 1995 aaKnown RBP8.35□□□□□ -1.07
USP39-219ENST00000496047 MAP3K15Q6ZN16 1313 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 MYH15Q9Y2K3 1946 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 CCDC88AQ3V6T2 1871 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 A0A0G2JS52 829 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 ATP5J2-PTCD1G3V325 749 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 ADAMTS2O95450 1211 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 KCNJ4P48050 445 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 NUCB2P80303 420 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 FOXK1P85037 733 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 CCDC57Q2TAC2 916 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 RNF20Q5VTR2 975 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 TSHZ3Q63HK5 1081 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 GPR153Q6NV75 609 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 TICAM2Q86XR7 235 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 SMARCC1Q92922 1105 aaPredicted RBP8.35□□□□□ -1.07
USP39-219ENST00000496047 FSD1Q9BTV5 496 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 SIL1Q9H173 461 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 ZBTB3Q9H5J0 574 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 ATG3Q9NT62 314 aa8.35□□□□□ -1.07
USP39-219ENST00000496047 PA2G4Q9UQ80 394 aaKnown RBP8.35□□□□□ -1.07
USP39-219ENST00000496047 LY75O60449 1722 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 DOCK2Q92608 1830 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 NBPF26B4DH59 902 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 H7C1W4 665 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 A1BGP04217 495 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 PCCAP05165 728 aaPredicted RBP8.34□□□□□ -1.07
USP39-219ENST00000496047 PRKCSHP14314 528 aaPredicted RBP8.34□□□□□ -1.07
USP39-219ENST00000496047 ZKSCAN1P17029 563 aaPredicted RBP8.34□□□□□ -1.07
USP39-219ENST00000496047 IL15P40933 162 aaPredicted RBP8.34□□□□□ -1.07
USP39-219ENST00000496047 PTGER2P43116 358 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 PIP4K2AP48426 406 aaPredicted RBP8.34□□□□□ -1.07
USP39-219ENST00000496047 TCIRG1Q13488 830 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 ARSIQ5FYB1 569 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 NBPF14Q5TI25 921 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 NBPF10Q6P3W6 841 aaKnown RBP8.34□□□□□ -1.07
USP39-219ENST00000496047 BARGINQ6ZT62 677 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 DNAJC10Q8IXB1 793 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 NBPF15Q8N660 670 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 PIGBQ92521 554 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 ARXQ96QS3 562 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 GPR108Q9NPR9 543 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 AKAP2Q9Y2D5 859 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 ZNF609O15014 1411 aa8.34□□□□□ -1.07
USP39-219ENST00000496047 THSD7AQ9UPZ6 1657 aa8.34□□□□□ -1.08
USP39-219ENST00000496047 SPATA31A5Q5VU36 1347 aa8.33□□□□□ -1.08
USP39-219ENST00000496047 SPATA31A7Q8IWB4 1347 aa8.33□□□□□ -1.08
USP39-219ENST00000496047 CDHR2Q9BYE9 1310 aa8.33□□□□□ -1.08
USP39-219ENST00000496047 AKAP11Q9UKA4 1901 aa8.33□□□□□ -1.08
USP39-219ENST00000496047 SGSM2O43147 1006 aa8.33□□□□□ -1.08
USP39-219ENST00000496047 CIAO1O76071 339 aa8.33□□□□□ -1.08
USP39-219ENST00000496047 IL6STP40189 918 aaPredicted RBP8.33□□□□□ -1.08
USP39-219ENST00000496047 TRIM28Q13263 835 aaKnown RBP8.33□□□□□ -1.08
USP39-219ENST00000496047 TNNI3KQ59H18 835 aa8.33□□□□□ -1.08
USP39-219ENST00000496047 LMBR1LQ6UX01 489 aa8.33□□□□□ -1.08
USP39-219ENST00000496047 GIGYF2Q6Y7W6 1299 aaKnown RBP8.33□□□□□ -1.08
USP39-219ENST00000496047 TTLL7Q6ZT98 887 aa8.33□□□□□ -1.08
USP39-219ENST00000496047 ISCA1Q9BUE6 129 aa8.33□□□□□ -1.08
USP39-219ENST00000496047 ANTXR1Q9H6X2 564 aa8.33□□□□□ -1.08
USP39-219ENST00000496047 ZNF652Q9Y2D9 606 aa8.33□□□□□ -1.08
USP39-219ENST00000496047 MYO5AQ9Y4I1 1855 aaKnown RBP8.33□□□□□ -1.08
USP39-219ENST00000496047 FPGT-TNNI3KV9GXZ4 949 aa8.33□□□□□ -1.08
USP39-219ENST00000496047 SPDYE16A6NNV3 312 aaPredicted RBP8.32□□□□□ -1.08
USP39-219ENST00000496047 ERVV-1B6SEH8 477 aa8.32□□□□□ -1.08
USP39-219ENST00000496047 SASH1O94885 1247 aa8.32□□□□□ -1.08
USP39-219ENST00000496047 MAP4K4O95819 1239 aaPredicted RBP8.32□□□□□ -1.08
USP39-219ENST00000496047 PSMA5P28066 241 aa8.32□□□□□ -1.08
USP39-219ENST00000496047 DEKP35659 375 aaKnown RBP8.32□□□□□ -1.08
USP39-219ENST00000496047 NEK4P51957 841 aa8.32□□□□□ -1.08
USP39-219ENST00000496047 PTPN12Q05209 780 aaKnown RBP8.32□□□□□ -1.08
USP39-219ENST00000496047 DSG2Q14126 1118 aa8.32□□□□□ -1.08
USP39-219ENST00000496047 SKOR2Q2VWA4 1001 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms