RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 NBPF4Q96M43 638 aa10.67□□□□□ -0.7
EPHA4-213ENST00000495693 DCTPP1Q9H773 170 aa10.67□□□□□ -0.7
EPHA4-213ENST00000495693 MAP10Q9P2G4 905 aa10.67□□□□□ -0.7
EPHA4-213ENST00000495693 GNAI2P04899 355 aa10.66□□□□□ -0.7
EPHA4-213ENST00000495693 TATP17735 454 aaPredicted RBP10.66□□□□□ -0.7
EPHA4-213ENST00000495693 SKOR1P84550 965 aa10.66□□□□□ -0.7
EPHA4-213ENST00000495693 FKBP5Q13451 457 aaPredicted RBP10.66□□□□□ -0.7
EPHA4-213ENST00000495693 ANKRD45Q5TZF3 282 aa10.66□□□□□ -0.7
EPHA4-213ENST00000495693 IL17REQ8NFR9 667 aa10.66□□□□□ -0.7
EPHA4-213ENST00000495693 IBTKQ9P2D0 1353 aaPredicted RBP10.65□□□□□ -0.7
EPHA4-213ENST00000495693 ZBTB7CA1YPR0 619 aa10.65□□□□□ -0.7
EPHA4-213ENST00000495693 BTBD11A6QL63 1104 aa10.65□□□□□ -0.7
EPHA4-213ENST00000495693 TBC1D32Q96NH3 1257 aa10.65□□□□□ -0.7
EPHA4-213ENST00000495693 PXDNQ92626 1479 aa10.65□□□□□ -0.7
EPHA4-213ENST00000495693 ADAMTS7Q9UKP4 1686 aa10.65□□□□□ -0.7
EPHA4-213ENST00000495693 SPATA31A3Q5VYP0 1347 aa10.64□□□□□ -0.71
EPHA4-213ENST00000495693 RNMTO43148 476 aaKnown RBP10.64□□□□□ -0.71
EPHA4-213ENST00000495693 AP1G2O75843 785 aa10.64□□□□□ -0.71
EPHA4-213ENST00000495693 SH3BP2P78314 561 aa10.64□□□□□ -0.71
EPHA4-213ENST00000495693 CEP85Q6P2H3 762 aa10.64□□□□□ -0.71
EPHA4-213ENST00000495693 ARMC2Q8NEN0 867 aa10.64□□□□□ -0.71
EPHA4-213ENST00000495693 LNPKQ9C0E8 428 aa10.64□□□□□ -0.71
EPHA4-213ENST00000495693 DBF4Q9UBU7 674 aaPredicted RBP10.64□□□□□ -0.71
EPHA4-213ENST00000495693 ATP10DQ9P241 1426 aa10.64□□□□□ -0.71
EPHA4-213ENST00000495693 STRCP1A6NGW2 1772 aa10.63□□□□□ -0.71
EPHA4-213ENST00000495693 SOCS7O14512 581 aa10.63□□□□□ -0.71
EPHA4-213ENST00000495693 DDX58O95786 925 aaKnown RBP10.63□□□□□ -0.71
EPHA4-213ENST00000495693 EIF4A1P60842 406 aaKnown RBP10.63□□□□□ -0.71
EPHA4-213ENST00000495693 RC3H1Q5TC82 1133 aaKnown RBP10.63□□□□□ -0.71
EPHA4-213ENST00000495693 SKAP1Q86WV1 359 aa10.63□□□□□ -0.71
EPHA4-213ENST00000495693 ZNF511Q8NB15 262 aa10.63□□□□□ -0.71
EPHA4-213ENST00000495693 CDC45O75419 566 aa10.62□□□□□ -0.71
EPHA4-213ENST00000495693 USP17L8P0C7I0 530 aa10.62□□□□□ -0.71
EPHA4-213ENST00000495693 CSB-PGBD3P0DP91 1061 aa10.62□□□□□ -0.71
EPHA4-213ENST00000495693 FOXC1Q12948 553 aa10.62□□□□□ -0.71
EPHA4-213ENST00000495693 HSP90AB4PQ58FF6 505 aa10.62□□□□□ -0.71
EPHA4-213ENST00000495693 SLC4A10Q6U841 1118 aa10.62□□□□□ -0.71
EPHA4-213ENST00000495693 IFNL2Q8IZJ0 200 aa10.62□□□□□ -0.71
EPHA4-213ENST00000495693 USHBP1Q8N6Y0 703 aa10.62□□□□□ -0.71
EPHA4-213ENST00000495693 BANK1Q8NDB2 785 aa10.62□□□□□ -0.71
EPHA4-213ENST00000495693 LRRN4Q8WUT4 740 aa10.62□□□□□ -0.71
EPHA4-213ENST00000495693 BAP1Q92560 729 aa10.62□□□□□ -0.71
EPHA4-213ENST00000495693 GPKOWQ92917 476 aaPredicted RBP eCLIP10.62□□□□□ -0.71
EPHA4-213ENST00000495693 C22orf23Q9BZE7 217 aa10.62□□□□□ -0.71
EPHA4-213ENST00000495693 SRCIN1Q9C0H9 1055 aa10.62□□□□□ -0.71
EPHA4-213ENST00000495693 TOR4AQ9NXH8 423 aa10.62□□□□□ -0.71
EPHA4-213ENST00000495693 CRYBG1Q9Y4K1 1723 aa10.61□□□□□ -0.71
EPHA4-213ENST00000495693 TNFRSF10AO00220 468 aa10.61□□□□□ -0.71
EPHA4-213ENST00000495693 UBTFL1P0CB47 393 aaPredicted RBP10.61□□□□□ -0.71
EPHA4-213ENST00000495693 KRT24Q2M2I5 525 aa10.61□□□□□ -0.71
EPHA4-213ENST00000495693 MRGPRX2Q96LB1 330 aa10.61□□□□□ -0.71
EPHA4-213ENST00000495693 HYPKQ9NX55 129 aa10.61□□□□□ -0.71
EPHA4-213ENST00000495693 MIS18AQ9NYP9 233 aa10.61□□□□□ -0.71
EPHA4-213ENST00000495693 PARP4Q9UKK3 1724 aaKnown RBP10.61□□□□□ -0.71
EPHA4-213ENST00000495693 MRC1P22897 1456 aa10.61□□□□□ -0.71
EPHA4-213ENST00000495693 RAB11FIP3O75154 756 aa10.6□□□□□ -0.71
EPHA4-213ENST00000495693 ALDH1L1O75891 902 aa10.6□□□□□ -0.71
EPHA4-213ENST00000495693 RBM25P49756 843 aaKnown RBP10.6□□□□□ -0.71
EPHA4-213ENST00000495693 XPCQ01831 940 aaPredicted RBP10.6□□□□□ -0.71
EPHA4-213ENST00000495693 LRRC59Q96AG4 307 aaKnown RBP10.6□□□□□ -0.71
EPHA4-213ENST00000495693 DCAF5Q96JK2 942 aa10.6□□□□□ -0.71
EPHA4-213ENST00000495693 MEIS3Q99687 375 aa10.6□□□□□ -0.71
EPHA4-213ENST00000495693 C1orf115Q9H7X2 142 aa10.6□□□□□ -0.71
EPHA4-213ENST00000495693 NLRP2Q9NX02 1062 aa10.6□□□□□ -0.71
EPHA4-213ENST00000495693 PKD1L3Q7Z443 1732 aa10.6□□□□□ -0.71
EPHA4-213ENST00000495693 SIPA1L3O60292 1781 aaPredicted RBP10.6□□□□□ -0.71
EPHA4-213ENST00000495693 COL18A1P39060 1754 aa10.6□□□□□ -0.71
EPHA4-213ENST00000495693 AOX1Q06278 1338 aa10.59□□□□□ -0.71
EPHA4-213ENST00000495693 SOS2Q07890 1332 aaPredicted RBP10.59□□□□□ -0.71
EPHA4-213ENST00000495693 ZC3H4Q9UPT8 1303 aaKnown RBP10.59□□□□□ -0.71
EPHA4-213ENST00000495693 ATP8B2P98198 1209 aa10.59□□□□□ -0.71
EPHA4-213ENST00000495693 NBPF14Q5TI25 921 aa10.59□□□□□ -0.71
EPHA4-213ENST00000495693 SIRT2Q8IXJ6 389 aa10.59□□□□□ -0.71
EPHA4-213ENST00000495693 OSBPL3Q9H4L5 887 aa10.59□□□□□ -0.71
EPHA4-213ENST00000495693 HEG1Q9ULI3 1381 aa10.59□□□□□ -0.71
EPHA4-213ENST00000495693 RGPD2P0DJD1 1756 aa10.59□□□□□ -0.71
EPHA4-213ENST00000495693 ERBB4Q15303 1308 aa10.58□□□□□ -0.71
EPHA4-213ENST00000495693 STRCQ7RTU9 1775 aa10.58□□□□□ -0.72
EPHA4-213ENST00000495693 SCN11AQ9UI33 1791 aa10.58□□□□□ -0.72
EPHA4-213ENST00000495693 SIAH2O43255 324 aa10.58□□□□□ -0.72
EPHA4-213ENST00000495693 EPB41L2O43491 1005 aaKnown RBP10.58□□□□□ -0.72
EPHA4-213ENST00000495693 DGAT1O75907 488 aa10.58□□□□□ -0.72
EPHA4-213ENST00000495693 MFAP1P55081 439 aaKnown RBP10.58□□□□□ -0.72
EPHA4-213ENST00000495693 ZC3H6P61129 1189 aaKnown RBP10.58□□□□□ -0.72
EPHA4-213ENST00000495693 TTC22Q5TAA0 569 aa10.58□□□□□ -0.72
EPHA4-213ENST00000495693 HSCBQ8IWL3 235 aa10.58□□□□□ -0.72
EPHA4-213ENST00000495693 TTC5Q8N0Z6 440 aa10.58□□□□□ -0.72
EPHA4-213ENST00000495693 CYP4X1Q8N118 509 aa10.58□□□□□ -0.72
EPHA4-213ENST00000495693 SNIP1Q8TAD8 396 aaKnown RBP10.58□□□□□ -0.72
EPHA4-213ENST00000495693 DNAAF4Q8WXU2 420 aa10.58□□□□□ -0.72
EPHA4-213ENST00000495693 LRRCC1Q9C099 1032 aa10.58□□□□□ -0.72
EPHA4-213ENST00000495693 SLC52A2Q9HAB3 445 aa10.58□□□□□ -0.72
EPHA4-213ENST00000495693 PCDH11XQ9BZA7 1347 aa10.58□□□□□ -0.72
EPHA4-213ENST00000495693 PCDH11YQ9BZA8 1340 aa10.58□□□□□ -0.72
EPHA4-213ENST00000495693 XIRP1Q702N8 1843 aaKnown RBP10.57□□□□□ -0.72
EPHA4-213ENST00000495693 GIGYF1O75420 1035 aaPredicted RBP10.57□□□□□ -0.72
EPHA4-213ENST00000495693 REC8O95072 547 aa10.57□□□□□ -0.72
EPHA4-213ENST00000495693 PHKG2P15735 406 aa10.57□□□□□ -0.72
EPHA4-213ENST00000495693 VARSP26640 1264 aaKnown RBP10.57□□□□□ -0.72
EPHA4-213ENST00000495693 LINC01559Q495D7 138 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms