RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 CCDC146Q8IYE0 955 aa12.34□□□□□ -0.43
GTF3C2-213ENST00000495298 TBC1D16Q8TBP0 767 aa12.34□□□□□ -0.43
GTF3C2-213ENST00000495298 ZNF646O15015 1829 aaPredicted RBP12.33□□□□□ -0.44
GTF3C2-213ENST00000495298 CHL1O00533 1208 aa12.33□□□□□ -0.44
GTF3C2-213ENST00000495298 SLC10A3P09131 477 aa12.33□□□□□ -0.44
GTF3C2-213ENST00000495298 NEUROD2Q15784 382 aa12.33□□□□□ -0.44
GTF3C2-213ENST00000495298 TMC4Q7Z404 712 aa12.33□□□□□ -0.44
GTF3C2-213ENST00000495298 PLBD2Q8NHP8 589 aa12.33□□□□□ -0.44
GTF3C2-213ENST00000495298 CDCA5Q96FF9 252 aa12.33□□□□□ -0.44
GTF3C2-213ENST00000495298 CSRNP1Q96S65 589 aa12.33□□□□□ -0.44
GTF3C2-213ENST00000495298 SEC31BQ9NQW1 1179 aa12.33□□□□□ -0.44
GTF3C2-213ENST00000495298 BABAM1Q9NWV8 329 aa12.33□□□□□ -0.44
GTF3C2-213ENST00000495298 MOB2Q70IA6 237 aa12.32□□□□□ -0.44
GTF3C2-213ENST00000495298 RASAL3Q86YV0 1011 aa12.32□□□□□ -0.44
GTF3C2-213ENST00000495298 C2orf69Q8N8R5 385 aa12.32□□□□□ -0.44
GTF3C2-213ENST00000495298 DCPSQ96C86 337 aaKnown RBP12.32□□□□□ -0.44
GTF3C2-213ENST00000495298 SAGE1Q9NXZ1 904 aa12.32□□□□□ -0.44
GTF3C2-213ENST00000495298 TRIM35Q9UPQ4 493 aa12.32□□□□□ -0.44
GTF3C2-213ENST00000495298 LAS1LQ9Y4W2 734 aaKnown RBP12.32□□□□□ -0.44
GTF3C2-213ENST00000495298 WTIPA6NIX2 430 aaPredicted RBP12.31□□□□□ -0.44
GTF3C2-213ENST00000495298 IRS4O14654 1257 aaPredicted RBP12.31□□□□□ -0.44
GTF3C2-213ENST00000495298 VIL1P09327 827 aaKnown RBP12.31□□□□□ -0.44
GTF3C2-213ENST00000495298 RPS12P25398 132 aaKnown RBP12.31□□□□□ -0.44
GTF3C2-213ENST00000495298 HDGFL1Q5TGJ6 251 aa12.31□□□□□ -0.44
GTF3C2-213ENST00000495298 ANKRD13DQ6ZTN6 518 aa12.31□□□□□ -0.44
GTF3C2-213ENST00000495298 CCDC102AQ96A19 550 aa12.31□□□□□ -0.44
GTF3C2-213ENST00000495298 PNNQ9H307 717 aaKnown RBP12.31□□□□□ -0.44
GTF3C2-213ENST00000495298 PAPPA2Q9BXP8 1791 aa12.3□□□□□ -0.44
GTF3C2-213ENST00000495298 SPEF2Q9C093 1822 aa12.3□□□□□ -0.44
GTF3C2-213ENST00000495298 MKI67P46013 3256 aaKnown RBP12.3□□□□□ -0.44
GTF3C2-213ENST00000495298 UFL1O94874 794 aa12.3□□□□□ -0.44
GTF3C2-213ENST00000495298 RPS8P62241 208 aaKnown RBP12.3□□□□□ -0.44
GTF3C2-213ENST00000495298 ANGEL2Q5VTE6 544 aaKnown RBP12.3□□□□□ -0.44
GTF3C2-213ENST00000495298 JARID2Q92833 1246 aaPredicted RBP12.3□□□□□ -0.44
GTF3C2-213ENST00000495298 CCDC85AQ96PX6 553 aaPredicted RBP12.3□□□□□ -0.44
GTF3C2-213ENST00000495298 HTTP42858 3142 aa12.3□□□□□ -0.44
GTF3C2-213ENST00000495298 ZNF280AP59817 542 aaPredicted RBP12.29□□□□□ -0.44
GTF3C2-213ENST00000495298 SCARF1Q14162 830 aa12.29□□□□□ -0.44
GTF3C2-213ENST00000495298 PRAMEF18Q5VWM3 479 aa12.29□□□□□ -0.44
GTF3C2-213ENST00000495298 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
GTF3C2-213ENST00000495298 EYA3Q99504 573 aa12.29□□□□□ -0.44
GTF3C2-213ENST00000495298 ZNF609O15014 1411 aa12.28□□□□□ -0.44
GTF3C2-213ENST00000495298 BRCA2P51587 3418 aa12.28□□□□□ -0.44
GTF3C2-213ENST00000495298 LMOD3Q0VAK6 560 aa12.28□□□□□ -0.44
GTF3C2-213ENST00000495298 RSBN1LQ6PCB5 846 aaPredicted RBP12.28□□□□□ -0.44
GTF3C2-213ENST00000495298 CTU1Q7Z7A3 348 aaKnown RBP12.28□□□□□ -0.44
GTF3C2-213ENST00000495298 GMLQ99445 158 aa12.28□□□□□ -0.44
GTF3C2-213ENST00000495298 MXD3Q9BW11 206 aa12.28□□□□□ -0.44
GTF3C2-213ENST00000495298 PHAXQ9H814 394 aaKnown RBP12.28□□□□□ -0.44
GTF3C2-213ENST00000495298 PODXL2Q9NZ53 605 aa12.28□□□□□ -0.44
GTF3C2-213ENST00000495298 DBF4Q9UBU7 674 aaPredicted RBP12.28□□□□□ -0.44
GTF3C2-213ENST00000495298 CENPFP49454 3210 aa12.28□□□□□ -0.44
GTF3C2-213ENST00000495298 TRIM28Q13263 835 aaKnown RBP12.27□□□□□ -0.45
GTF3C2-213ENST00000495298 DUSP27Q5VZP5 1158 aa12.27□□□□□ -0.45
GTF3C2-213ENST00000495298 ZC3H12CQ9C0D7 883 aaKnown RBP12.27□□□□□ -0.45
GTF3C2-213ENST00000495298 HPS5Q9UPZ3 1129 aa12.27□□□□□ -0.45
GTF3C2-213ENST00000495298 UBE2Q2LH0YL09 131 aa12.26□□□□□ -0.45
GTF3C2-213ENST00000495298 TBC1D8O95759 1140 aa12.26□□□□□ -0.45
GTF3C2-213ENST00000495298 HOXB7P09629 217 aa12.26□□□□□ -0.45
GTF3C2-213ENST00000495298 ZBTB38Q8NAP3 1195 aaPredicted RBP12.26□□□□□ -0.45
GTF3C2-213ENST00000495298 MYD88Q99836 296 aa12.26□□□□□ -0.45
GTF3C2-213ENST00000495298 MYOZ2Q9NPC6 264 aa12.26□□□□□ -0.45
GTF3C2-213ENST00000495298 MBIPQ9NS73 344 aa12.26□□□□□ -0.45
GTF3C2-213ENST00000495298 PCDH10Q9P2E7 1040 aa12.26□□□□□ -0.45
GTF3C2-213ENST00000495298 ANKIB1Q9P2G1 1089 aa12.26□□□□□ -0.45
GTF3C2-213ENST00000495298 GGA1Q9UJY5 639 aa12.26□□□□□ -0.45
GTF3C2-213ENST00000495298 MKRN3Q13064 507 aaKnown RBP12.25□□□□□ -0.45
GTF3C2-213ENST00000495298 NBPF9Q3BBW0 867 aa12.25□□□□□ -0.45
GTF3C2-213ENST00000495298 AGBL3Q8NEM8 1001 aa12.25□□□□□ -0.45
GTF3C2-213ENST00000495298 ZNF296Q8WUU4 475 aaPredicted RBP12.25□□□□□ -0.45
GTF3C2-213ENST00000495298 R3HDMLQ9H3Y0 253 aa12.25□□□□□ -0.45
GTF3C2-213ENST00000495298 HYPKQ9NX55 129 aa12.25□□□□□ -0.45
GTF3C2-213ENST00000495298 ELL2O00472 640 aaPredicted RBP12.24□□□□□ -0.45
GTF3C2-213ENST00000495298 USP17L8P0C7I0 530 aa12.24□□□□□ -0.45
GTF3C2-213ENST00000495298 MYH3P11055 1940 aa12.24□□□□□ -0.45
GTF3C2-213ENST00000495298 RIC3Q7Z5B4 369 aa12.24□□□□□ -0.45
GTF3C2-213ENST00000495298 XDHP47989 1333 aa12.23□□□□□ -0.45
GTF3C2-213ENST00000495298 PITPNM2Q9BZ72 1349 aa12.23□□□□□ -0.45
GTF3C2-213ENST00000495298 G3V3G9 751 aa12.23□□□□□ -0.45
GTF3C2-213ENST00000495298 DCAF8Q5TAQ9 597 aa12.23□□□□□ -0.45
GTF3C2-213ENST00000495298 PRPF38BQ5VTL8 546 aaKnown RBP12.23□□□□□ -0.45
GTF3C2-213ENST00000495298 RUNDC1Q96C34 613 aa12.23□□□□□ -0.45
GTF3C2-213ENST00000495298 FZD1Q9UP38 647 aa12.23□□□□□ -0.45
GTF3C2-213ENST00000495298 USP17L3A6NCW0 530 aa12.22□□□□□ -0.45
GTF3C2-213ENST00000495298 USP17L4A6NCW7 530 aa12.22□□□□□ -0.45
GTF3C2-213ENST00000495298 PDE8AO60658 829 aa12.22□□□□□ -0.45
GTF3C2-213ENST00000495298 SASH1O94885 1247 aa12.22□□□□□ -0.45
GTF3C2-213ENST00000495298 PCCAP05165 728 aaPredicted RBP12.22□□□□□ -0.45
GTF3C2-213ENST00000495298 ZNF853P0CG23 659 aa12.22□□□□□ -0.45
GTF3C2-213ENST00000495298 KLRK1P26718 216 aa12.22□□□□□ -0.45
GTF3C2-213ENST00000495298 FKBP1BP68106 108 aa12.22□□□□□ -0.45
GTF3C2-213ENST00000495298 GOLGA2Q08379 1002 aa12.22□□□□□ -0.45
GTF3C2-213ENST00000495298 RALBP1Q15311 655 aa12.22□□□□□ -0.45
GTF3C2-213ENST00000495298 CCDC152Q4G0S7 254 aa12.22□□□□□ -0.45
GTF3C2-213ENST00000495298 DACT2Q5SW24 774 aa12.22□□□□□ -0.45
GTF3C2-213ENST00000495298 USP17L1Q7RTZ2 530 aa12.22□□□□□ -0.45
GTF3C2-213ENST00000495298 TXNRD3Q86VQ6 643 aa12.22□□□□□ -0.45
GTF3C2-213ENST00000495298 ADAMTS8Q9UP79 889 aa12.22□□□□□ -0.45
GTF3C2-213ENST00000495298 MYBBP1AQ9BQG0 1328 aaKnown RBP12.21□□□□□ -0.45
GTF3C2-213ENST00000495298 GPR25O00155 361 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms