RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 USP17L15C9J2P7 530 aa10.19□□□□□ -0.78
RPGR-210ENST00000494841 USP17L10C9JJH3 530 aa10.19□□□□□ -0.78
RPGR-210ENST00000494841 USP17L13C9JLJ4 530 aa10.19□□□□□ -0.78
RPGR-210ENST00000494841 USP17L12C9JPN9 530 aa10.19□□□□□ -0.78
RPGR-210ENST00000494841 USP17L11C9JVI0 530 aa10.19□□□□□ -0.78
RPGR-210ENST00000494841 USP17L21D6R901 530 aa10.19□□□□□ -0.78
RPGR-210ENST00000494841 USP17L18D6R9N7 530 aa10.19□□□□□ -0.78
RPGR-210ENST00000494841 USP17L22D6RA61 530 aa10.19□□□□□ -0.78
RPGR-210ENST00000494841 USP17L17D6RBQ6 530 aa10.19□□□□□ -0.78
RPGR-210ENST00000494841 USP17L19D6RCP7 530 aa10.19□□□□□ -0.78
RPGR-210ENST00000494841 USP17L20D6RJB6 530 aa10.19□□□□□ -0.78
RPGR-210ENST00000494841 ZBTB7BO15156 539 aaPredicted RBP10.19□□□□□ -0.78
RPGR-210ENST00000494841 USP17L24Q0WX57 530 aa10.19□□□□□ -0.78
RPGR-210ENST00000494841 CC2D1BQ5T0F9 858 aaKnown RBP10.19□□□□□ -0.78
RPGR-210ENST00000494841 NLRP13Q86W25 1043 aa10.19□□□□□ -0.78
RPGR-210ENST00000494841 ZNF395Q9H8N7 513 aaPredicted RBP10.19□□□□□ -0.78
RPGR-210ENST00000494841 ETNK1Q9HBU6 452 aa10.19□□□□□ -0.78
RPGR-210ENST00000494841 RAB6BQ9NRW1 208 aa10.19□□□□□ -0.78
RPGR-210ENST00000494841 ARHGEF10O15013 1369 aa10.18□□□□□ -0.78
RPGR-210ENST00000494841 CGNL1Q0VF96 1302 aa10.18□□□□□ -0.78
RPGR-210ENST00000494841 A0A1W2PRU2 124 aa10.18□□□□□ -0.78
RPGR-210ENST00000494841 FAM196BA6NMK8 535 aa10.18□□□□□ -0.78
RPGR-210ENST00000494841 SPINT1O43278 529 aa10.18□□□□□ -0.78
RPGR-210ENST00000494841 DKK1O94907 266 aa10.18□□□□□ -0.78
RPGR-210ENST00000494841 UPP2O95045 317 aa10.18□□□□□ -0.78
RPGR-210ENST00000494841 BMP2P12643 396 aa10.18□□□□□ -0.78
RPGR-210ENST00000494841 TNNT2P45379 298 aaPredicted RBP10.18□□□□□ -0.78
RPGR-210ENST00000494841 PTK7Q13308 1070 aa10.18□□□□□ -0.78
RPGR-210ENST00000494841 C6orf118Q5T5N4 469 aa10.18□□□□□ -0.78
RPGR-210ENST00000494841 SIX5Q8N196 739 aa10.18□□□□□ -0.78
RPGR-210ENST00000494841 LARGE2Q8N3Y3 721 aa10.18□□□□□ -0.78
RPGR-210ENST00000494841 COG3Q96JB2 828 aa10.18□□□□□ -0.78
RPGR-210ENST00000494841 ZNF594Q96JF6 807 aaPredicted RBP10.18□□□□□ -0.78
RPGR-210ENST00000494841 PURBQ96QR8 312 aaKnown RBP10.18□□□□□ -0.78
RPGR-210ENST00000494841 KIF20BQ96Q89 1820 aa10.18□□□□□ -0.78
RPGR-210ENST00000494841 MARF1Q9Y4F3 1742 aaKnown RBP10.18□□□□□ -0.78
RPGR-210ENST00000494841 SHPRHQ149N8 1683 aa10.18□□□□□ -0.78
RPGR-210ENST00000494841 MED1Q15648 1581 aaPredicted RBP10.18□□□□□ -0.78
RPGR-210ENST00000494841 TMEM229AB2RXF0 380 aa10.17□□□□□ -0.78
RPGR-210ENST00000494841 ADAMTS2O95450 1211 aa10.17□□□□□ -0.78
RPGR-210ENST00000494841 IL2RAP01589 272 aa10.17□□□□□ -0.78
RPGR-210ENST00000494841 GCP02774 474 aa10.17□□□□□ -0.78
RPGR-210ENST00000494841 ZC3H6P61129 1189 aaKnown RBP10.17□□□□□ -0.78
RPGR-210ENST00000494841 LARP1Q6PKG0 1096 aaKnown RBP10.17□□□□□ -0.78
RPGR-210ENST00000494841 TPCN2Q8NHX9 752 aa10.17□□□□□ -0.78
RPGR-210ENST00000494841 USP31Q70CQ4 1352 aa10.16□□□□□ -0.78
RPGR-210ENST00000494841 COL22A1Q8NFW1 1626 aaPredicted RBP10.16□□□□□ -0.78
RPGR-210ENST00000494841 ZBTB7CA1YPR0 619 aa10.16□□□□□ -0.78
RPGR-210ENST00000494841 GDF10P55107 478 aa10.16□□□□□ -0.78
RPGR-210ENST00000494841 CLN3Q13286 438 aa10.16□□□□□ -0.78
RPGR-210ENST00000494841 SCARF1Q14162 830 aa10.16□□□□□ -0.78
RPGR-210ENST00000494841 CCDC102BQ68D86 513 aa10.16□□□□□ -0.78
RPGR-210ENST00000494841 INSM2Q96T92 566 aaPredicted RBP10.16□□□□□ -0.78
RPGR-210ENST00000494841 USP19O94966 1318 aa10.15□□□□□ -0.78
RPGR-210ENST00000494841 ATG7O95352 703 aa10.15□□□□□ -0.78
RPGR-210ENST00000494841 INHAP05111 366 aa10.15□□□□□ -0.78
RPGR-210ENST00000494841 MORC1Q86VD1 984 aa10.15□□□□□ -0.78
RPGR-210ENST00000494841 ZFP42Q96MM3 310 aa10.15□□□□□ -0.78
RPGR-210ENST00000494841 HRH3Q9Y5N1 445 aa10.15□□□□□ -0.78
RPGR-210ENST00000494841 CRYBG1Q9Y4K1 1723 aa10.15□□□□□ -0.78
RPGR-210ENST00000494841 SPATA31A6Q5VVP1 1343 aa10.14□□□□□ -0.79
RPGR-210ENST00000494841 ABCA3Q99758 1704 aa10.14□□□□□ -0.79
RPGR-210ENST00000494841 FAM83GA6ND36 823 aa10.14□□□□□ -0.79
RPGR-210ENST00000494841 MEN1O00255 615 aa10.14□□□□□ -0.79
RPGR-210ENST00000494841 CTSOP43234 321 aaPredicted RBP10.14□□□□□ -0.79
RPGR-210ENST00000494841 CHRNA2Q15822 529 aa10.14□□□□□ -0.79
RPGR-210ENST00000494841 XAGE2Q96GT9 111 aa10.14□□□□□ -0.79
RPGR-210ENST00000494841 ARXQ96QS3 562 aa10.14□□□□□ -0.79
RPGR-210ENST00000494841 ZMIZ1Q9ULJ6 1067 aa10.14□□□□□ -0.79
RPGR-210ENST00000494841 OVOS2A0A0J9YW53 1432 aa10.14□□□□□ -0.79
RPGR-210ENST00000494841 OVOS2Q6IE36 1432 aa10.14□□□□□ -0.79
RPGR-210ENST00000494841 LRP6O75581 1613 aa10.14□□□□□ -0.79
RPGR-210ENST00000494841 PHRF1Q9P1Y6 1649 aaKnown RBP10.14□□□□□ -0.79
RPGR-210ENST00000494841 MAP2P11137 1827 aaKnown RBP10.13□□□□□ -0.79
RPGR-210ENST00000494841 DPYDQ12882 1025 aa10.13□□□□□ -0.79
RPGR-210ENST00000494841 RRS1Q15050 365 aaKnown RBP10.13□□□□□ -0.79
RPGR-210ENST00000494841 MEX3CQ5U5Q3 659 aaKnown RBP10.13□□□□□ -0.79
RPGR-210ENST00000494841 FOXD4L5Q5VV16 416 aaPredicted RBP10.13□□□□□ -0.79
RPGR-210ENST00000494841 ANKMY2Q8IV38 441 aa10.13□□□□□ -0.79
RPGR-210ENST00000494841 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.13□□□□□ -0.79
RPGR-210ENST00000494841 KCNH5Q8NCM2 988 aa10.13□□□□□ -0.79
RPGR-210ENST00000494841 CNKSR1Q969H4 720 aa10.13□□□□□ -0.79
RPGR-210ENST00000494841 ESYT1Q9BSJ8 1104 aa10.13□□□□□ -0.79
RPGR-210ENST00000494841 ZNF358Q9NW07 568 aa10.13□□□□□ -0.79
RPGR-210ENST00000494841 NOVA2Q9UNW9 492 aaKnown RBP10.13□□□□□ -0.79
RPGR-210ENST00000494841 ANKRD26Q9UPS8 1709 aa10.13□□□□□ -0.79
RPGR-210ENST00000494841 KIAA0232Q92628 1395 aa10.13□□□□□ -0.79
RPGR-210ENST00000494841 SLIT3O75094 1523 aa10.12□□□□□ -0.79
RPGR-210ENST00000494841 PPM1GO15355 546 aaPredicted RBP10.12□□□□□ -0.79
RPGR-210ENST00000494841 ELOAQ14241 798 aaKnown RBP10.12□□□□□ -0.79
RPGR-210ENST00000494841 ARHGEF25Q86VW2 580 aa10.12□□□□□ -0.79
RPGR-210ENST00000494841 C8orf37Q96NL8 207 aa10.12□□□□□ -0.79
RPGR-210ENST00000494841 POLMQ9NP87 494 aaPredicted RBP10.12□□□□□ -0.79
RPGR-210ENST00000494841 GMPR2Q9P2T1 348 aaKnown RBP10.12□□□□□ -0.79
RPGR-210ENST00000494841 USP54Q70EL1 1684 aa10.12□□□□□ -0.79
RPGR-210ENST00000494841 SFI1A8K8P3 1242 aa10.11□□□□□ -0.79
RPGR-210ENST00000494841 STK32AQ8WU08 396 aa10.11□□□□□ -0.79
RPGR-210ENST00000494841 NGLY1Q96IV0 654 aa10.11□□□□□ -0.79
RPGR-210ENST00000494841 NLRP3Q96P20 1036 aa10.11□□□□□ -0.79
RPGR-210ENST00000494841 PRDM11Q9NQV5 511 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms