RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 BSDC1Q9NW68 430 aaPredicted RBP16.74■□□□□ 0.27
ERCC3-209ENST00000494464 GGA1Q9UJY5 639 aa16.74■□□□□ 0.27
ERCC3-209ENST00000494464 PTPRCP08575 1304 aa16.73■□□□□ 0.27
ERCC3-209ENST00000494464 ALDH1L1O75891 902 aa16.73■□□□□ 0.27
ERCC3-209ENST00000494464 UFL1O94874 794 aa16.73■□□□□ 0.27
ERCC3-209ENST00000494464 CSF1RP07333 972 aa16.73■□□□□ 0.27
ERCC3-209ENST00000494464 TNIP1Q15025 636 aa16.73■□□□□ 0.27
ERCC3-209ENST00000494464 MRPL50Q8N5N7 158 aaKnown RBP16.73■□□□□ 0.27
ERCC3-209ENST00000494464 CDCA7LQ96GN5 454 aa16.73■□□□□ 0.27
ERCC3-209ENST00000494464 GPRC5DQ9NZD1 345 aa16.73■□□□□ 0.27
ERCC3-209ENST00000494464 ANKIB1Q9P2G1 1089 aa16.73■□□□□ 0.27
ERCC3-209ENST00000494464 SCN9AQ15858 1988 aa16.73■□□□□ 0.27
ERCC3-209ENST00000494464 PASKQ96RG2 1323 aa16.72■□□□□ 0.27
ERCC3-209ENST00000494464 GRM8O00222 908 aa16.72■□□□□ 0.27
ERCC3-209ENST00000494464 RAD17O75943 681 aa16.72■□□□□ 0.27
ERCC3-209ENST00000494464 CT47B1P0C2W7 299 aaPredicted RBP16.72■□□□□ 0.27
ERCC3-209ENST00000494464 FAM161AQ3B820 660 aa16.72■□□□□ 0.27
ERCC3-209ENST00000494464 USP50Q70EL3 339 aaPredicted RBP16.72■□□□□ 0.27
ERCC3-209ENST00000494464 ZNF609O15014 1411 aa16.72■□□□□ 0.27
ERCC3-209ENST00000494464 RIMBP2O15034 1052 aa16.71■□□□□ 0.27
ERCC3-209ENST00000494464 ECE2O60344 883 aa16.71■□□□□ 0.27
ERCC3-209ENST00000494464 ITGA6P23229 1130 aa16.71■□□□□ 0.27
ERCC3-209ENST00000494464 EPS15P42566 896 aa16.71■□□□□ 0.27
ERCC3-209ENST00000494464 GMPSP49915 693 aaPredicted RBP16.71■□□□□ 0.27
ERCC3-209ENST00000494464 HTRA3P83110 453 aa16.71■□□□□ 0.27
ERCC3-209ENST00000494464 ALDH1L2Q3SY69 923 aa16.71■□□□□ 0.27
ERCC3-209ENST00000494464 SSH1Q8WYL5 1049 aa16.71■□□□□ 0.27
ERCC3-209ENST00000494464 KLRG1Q96E93 195 aa16.71■□□□□ 0.27
ERCC3-209ENST00000494464 ZC3H12CQ9C0D7 883 aaKnown RBP16.71■□□□□ 0.27
ERCC3-209ENST00000494464 SRCIN1Q9C0H9 1055 aa16.71■□□□□ 0.27
ERCC3-209ENST00000494464 DBNDD1Q9H9R9 158 aa16.71■□□□□ 0.27
ERCC3-209ENST00000494464 ADARB2Q9NS39 739 aaKnown RBP16.71■□□□□ 0.27
ERCC3-209ENST00000494464 MED23Q9ULK4 1368 aa16.71■□□□□ 0.27
ERCC3-209ENST00000494464 ITGBL1O95965 494 aaPredicted RBP16.7■□□□□ 0.26
ERCC3-209ENST00000494464 ATP2B4P23634 1241 aa16.7■□□□□ 0.26
ERCC3-209ENST00000494464 IGHMBP2P38935 993 aaKnown RBP16.7■□□□□ 0.26
ERCC3-209ENST00000494464 GPR101Q96P66 508 aaPredicted RBP16.7■□□□□ 0.26
ERCC3-209ENST00000494464 MINPP1Q9UNW1 487 aa16.7■□□□□ 0.26
ERCC3-209ENST00000494464 CLEC11AQ9Y240 323 aa16.7■□□□□ 0.26
ERCC3-209ENST00000494464 ZNF646O15015 1829 aaPredicted RBP16.69■□□□□ 0.26
ERCC3-209ENST00000494464 FOXO4P98177 505 aa16.69■□□□□ 0.26
ERCC3-209ENST00000494464 SLC4A10Q6U841 1118 aa16.69■□□□□ 0.26
ERCC3-209ENST00000494464 CREBZFQ9NS37 354 aa16.69■□□□□ 0.26
ERCC3-209ENST00000494464 PSMD14O00487 310 aa16.68■□□□□ 0.26
ERCC3-209ENST00000494464 DPF2Q92785 391 aa16.68■□□□□ 0.26
ERCC3-209ENST00000494464 BCL2L13Q9BXK5 485 aa16.68■□□□□ 0.26
ERCC3-209ENST00000494464 C9orf78Q9NZ63 289 aaPredicted RBP16.68■□□□□ 0.26
ERCC3-209ENST00000494464 UTYO14607 1347 aa16.68■□□□□ 0.26
ERCC3-209ENST00000494464 ANKRD18BA2A2Z9 1011 aa16.67■□□□□ 0.26
ERCC3-209ENST00000494464 RPS12P25398 132 aaKnown RBP16.67■□□□□ 0.26
ERCC3-209ENST00000494464 DOK7Q18PE1 504 aa16.67■□□□□ 0.26
ERCC3-209ENST00000494464 MAP1SQ66K74 1059 aaPredicted RBP16.67■□□□□ 0.26
ERCC3-209ENST00000494464 CNTROBQ8N137 903 aa16.67■□□□□ 0.26
ERCC3-209ENST00000494464 MPHOSPH8Q99549 860 aa16.67■□□□□ 0.26
ERCC3-209ENST00000494464 TRPM7Q96QT4 1865 aa16.67■□□□□ 0.26
ERCC3-209ENST00000494464 CCT4P50991 539 aaKnown RBP16.66■□□□□ 0.26
ERCC3-209ENST00000494464 IFIT5Q13325 482 aaKnown RBP16.66■□□□□ 0.26
ERCC3-209ENST00000494464 JMYQ8N9B5 988 aa16.66■□□□□ 0.26
ERCC3-209ENST00000494464 ANKRD2Q9GZV1 360 aa16.66■□□□□ 0.26
ERCC3-209ENST00000494464 SMC4Q9NTJ3 1288 aa16.66■□□□□ 0.26
ERCC3-209ENST00000494464 LEMD3Q9Y2U8 911 aa16.66■□□□□ 0.26
ERCC3-209ENST00000494464 G3V3G9 751 aa16.65■□□□□ 0.26
ERCC3-209ENST00000494464 BRPF1P55201 1214 aaPredicted RBP16.65■□□□□ 0.26
ERCC3-209ENST00000494464 EPHA10Q5JZY3 1008 aa16.65■□□□□ 0.26
ERCC3-209ENST00000494464 DCAF8Q5TAQ9 597 aa16.65■□□□□ 0.26
ERCC3-209ENST00000494464 LMBR1LQ6UX01 489 aa16.65■□□□□ 0.26
ERCC3-209ENST00000494464 VIL1P09327 827 aaKnown RBP16.64■□□□□ 0.26
ERCC3-209ENST00000494464 PODNQ7Z5L7 613 aa16.64■□□□□ 0.26
ERCC3-209ENST00000494464 MICALL2Q8IY33 904 aa16.64■□□□□ 0.26
ERCC3-209ENST00000494464 ZC3H15Q8WU90 426 aaKnown RBP16.64■□□□□ 0.26
ERCC3-209ENST00000494464 KCNQ5Q9NR82 932 aa16.64■□□□□ 0.26
ERCC3-209ENST00000494464 CNOT7Q9UIV1 285 aaKnown RBP16.64■□□□□ 0.26
ERCC3-209ENST00000494464 ZBTB12Q9Y330 459 aaPredicted RBP16.64■□□□□ 0.26
ERCC3-209ENST00000494464 CHMP3Q9Y3E7 222 aa16.64■□□□□ 0.26
ERCC3-209ENST00000494464 H7C1D1 291 aa16.64■□□□□ 0.25
ERCC3-209ENST00000494464 NBPF7P0C2Y1 421 aaPredicted RBP16.64■□□□□ 0.25
ERCC3-209ENST00000494464 CHRNDQ07001 517 aa16.64■□□□□ 0.25
ERCC3-209ENST00000494464 SUCLG2Q96I99 432 aa16.64■□□□□ 0.25
ERCC3-209ENST00000494464 PGAP2Q9UHJ9 254 aa16.64■□□□□ 0.25
ERCC3-209ENST00000494464 ZNF804BA4D1E1 1349 aa16.63■□□□□ 0.25
ERCC3-209ENST00000494464 TMEM88BA6NKF7 163 aa16.63■□□□□ 0.25
ERCC3-209ENST00000494464 CCDC57Q2TAC2 916 aa16.63■□□□□ 0.25
ERCC3-209ENST00000494464 TRPM4Q8TD43 1214 aa16.63■□□□□ 0.25
ERCC3-209ENST00000494464 KAZALD1Q96I82 304 aa16.63■□□□□ 0.25
ERCC3-209ENST00000494464 CNTNAP1P78357 1384 aa16.62■□□□□ 0.25
ERCC3-209ENST00000494464 SHTN1A0MZ66 631 aa16.62■□□□□ 0.25
ERCC3-209ENST00000494464 WTIPA6NIX2 430 aaPredicted RBP16.62■□□□□ 0.25
ERCC3-209ENST00000494464 HIRAP54198 1017 aaPredicted RBP16.62■□□□□ 0.25
ERCC3-209ENST00000494464 RABL6Q3YEC7 729 aaPredicted RBP16.62■□□□□ 0.25
ERCC3-209ENST00000494464 RSBN1LQ6PCB5 846 aaPredicted RBP16.62■□□□□ 0.25
ERCC3-209ENST00000494464 AGBL3Q8NEM8 1001 aa16.62■□□□□ 0.25
ERCC3-209ENST00000494464 COA1Q9GZY4 146 aa16.61■□□□□ 0.25
ERCC3-209ENST00000494464 KIF16BQ96L93 1317 aa16.61■□□□□ 0.25
ERCC3-209ENST00000494464 IRS2Q9Y4H2 1338 aa16.61■□□□□ 0.25
ERCC3-209ENST00000494464 USP17L3A6NCW0 530 aa16.6■□□□□ 0.25
ERCC3-209ENST00000494464 USP17L4A6NCW7 530 aa16.6■□□□□ 0.25
ERCC3-209ENST00000494464 TAF7LQ5H9L4 462 aa16.6■□□□□ 0.25
ERCC3-209ENST00000494464 C15orf52Q6ZUT6 534 aaKnown RBP16.6■□□□□ 0.25
ERCC3-209ENST00000494464 USP17L1Q7RTZ2 530 aa16.6■□□□□ 0.25
ERCC3-209ENST00000494464 GMLQ99445 158 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms