RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 ZNF594Q96JF6 807 aaPredicted RBP29.47■■■□□ 2.31
CLIC3-203ENST00000494426 UBTFL1P0CB47 393 aaPredicted RBP29.46■■■□□ 2.31
CLIC3-203ENST00000494426 CCDC57Q2TAC2 916 aa29.46■■■□□ 2.31
CLIC3-203ENST00000494426 C6orf229H3BNL8 230 aa29.45■■■□□ 2.31
CLIC3-203ENST00000494426 RLBP1P12271 317 aa29.45■■■□□ 2.31
CLIC3-203ENST00000494426 JDP2Q8WYK2 163 aa29.45■■■□□ 2.31
CLIC3-203ENST00000494426 MPHOSPH8Q99549 860 aa29.45■■■□□ 2.31
CLIC3-203ENST00000494426 ANKIB1Q9P2G1 1089 aa29.45■■■□□ 2.31
CLIC3-203ENST00000494426 ZNF541Q9H0D2 1346 aa29.45■■■□□ 2.3
CLIC3-203ENST00000494426 WTIPA6NIX2 430 aaPredicted RBP29.44■■■□□ 2.3
CLIC3-203ENST00000494426 GPR101Q96P66 508 aaPredicted RBP29.44■■■□□ 2.3
CLIC3-203ENST00000494426 NMRK2Q9NPI5 230 aa29.44■■■□□ 2.3
CLIC3-203ENST00000494426 XDHP47989 1333 aa29.44■■■□□ 2.3
CLIC3-203ENST00000494426 KDM2BQ8NHM5 1336 aa29.44■■■□□ 2.3
CLIC3-203ENST00000494426 WASHC4Q2M389 1173 aa29.43■■■□□ 2.3
CLIC3-203ENST00000494426 DPY19L2Q6NUT2 758 aa29.43■■■□□ 2.3
CLIC3-203ENST00000494426 DZIP1LQ8IYY4 767 aaKnown RBP29.43■■■□□ 2.3
CLIC3-203ENST00000494426 GGA1Q9UJY5 639 aa29.43■■■□□ 2.3
CLIC3-203ENST00000494426 A0A1B0GUL6 1792 aa29.42■■■□□ 2.3
CLIC3-203ENST00000494426 DDNO94850 711 aaPredicted RBP29.42■■■□□ 2.3
CLIC3-203ENST00000494426 UFL1O94874 794 aa29.42■■■□□ 2.3
CLIC3-203ENST00000494426 NIM1KQ8IY84 436 aa29.42■■■□□ 2.3
CLIC3-203ENST00000494426 LRRFIP2Q9Y608 721 aaKnown RBP29.42■■■□□ 2.3
CLIC3-203ENST00000494426 KIF3CO14782 793 aa29.41■■■□□ 2.3
CLIC3-203ENST00000494426 RIMBP2O15034 1052 aa29.41■■■□□ 2.3
CLIC3-203ENST00000494426 WDR90Q96KV7 1748 aa29.4■■■□□ 2.3
CLIC3-203ENST00000494426 ATP2B4P23634 1241 aa29.4■■■□□ 2.3
CLIC3-203ENST00000494426 CHRNDQ07001 517 aa29.4■■■□□ 2.3
CLIC3-203ENST00000494426 EYA3Q99504 573 aa29.4■■■□□ 2.3
CLIC3-203ENST00000494426 RRAGCQ9HB90 399 aa29.4■■■□□ 2.3
CLIC3-203ENST00000494426 POTECB2RU33 542 aa29.39■■■□□ 2.3
CLIC3-203ENST00000494426 GNAI3P08754 354 aa29.39■■■□□ 2.3
CLIC3-203ENST00000494426 TAF7LQ5H9L4 462 aa29.39■■■□□ 2.3
CLIC3-203ENST00000494426 LDHAL6AQ6ZMR3 332 aa29.39■■■□□ 2.3
CLIC3-203ENST00000494426 RFX5P48382 616 aaPredicted RBP29.38■■■□□ 2.29
CLIC3-203ENST00000494426 FTSJ3Q8IY81 847 aaKnown RBP29.38■■■□□ 2.29
CLIC3-203ENST00000494426 PUS3Q9BZE2 481 aaKnown RBP29.38■■■□□ 2.29
CLIC3-203ENST00000494426 ANKRD2Q9GZV1 360 aa29.38■■■□□ 2.29
CLIC3-203ENST00000494426 ZNRF3Q9ULT6 936 aa29.38■■■□□ 2.29
CLIC3-203ENST00000494426 PLIN1O60240 522 aa29.37■■■□□ 2.29
CLIC3-203ENST00000494426 EIF6P56537 245 aaKnown RBP29.37■■■□□ 2.29
CLIC3-203ENST00000494426 PANK1Q8TE04 598 aa29.37■■■□□ 2.29
CLIC3-203ENST00000494426 ZC3H12CQ9C0D7 883 aaKnown RBP29.37■■■□□ 2.29
CLIC3-203ENST00000494426 HDAC5Q9UQL6 1122 aa29.37■■■□□ 2.29
CLIC3-203ENST00000494426 YDJCA8MPS7 323 aa29.36■■■□□ 2.29
CLIC3-203ENST00000494426 HELBQ8NG08 1087 aaPredicted RBP29.36■■■□□ 2.29
CLIC3-203ENST00000494426 KLHDC4Q8TBB5 520 aa29.36■■■□□ 2.29
CLIC3-203ENST00000494426 LEMD3Q9Y2U8 911 aa29.36■■■□□ 2.29
CLIC3-203ENST00000494426 TAF5LO75529 589 aa29.35■■■□□ 2.29
CLIC3-203ENST00000494426 DOK7Q18PE1 504 aa29.35■■■□□ 2.29
CLIC3-203ENST00000494426 DBNDD1Q9H9R9 158 aa29.35■■■□□ 2.29
CLIC3-203ENST00000494426 CNNM1Q9NRU3 951 aa29.35■■■□□ 2.29
CLIC3-203ENST00000494426 RIPOR2Q9Y4F9 1068 aa29.35■■■□□ 2.29
CLIC3-203ENST00000494426 CXCL9Q07325 125 aa29.34■■■□□ 2.29
CLIC3-203ENST00000494426 SNAP23O00161 211 aa29.33■■■□□ 2.29
CLIC3-203ENST00000494426 ZBTB7BO15156 539 aaPredicted RBP29.33■■■□□ 2.29
CLIC3-203ENST00000494426 LRRC24Q50LG9 513 aa29.33■■■□□ 2.29
CLIC3-203ENST00000494426 ITPRIPQ8IWB1 547 aa29.33■■■□□ 2.29
CLIC3-203ENST00000494426 GPC2Q8N158 579 aa29.33■■■□□ 2.29
CLIC3-203ENST00000494426 L3MBTL3Q96JM7 780 aaPredicted RBP29.33■■■□□ 2.29
CLIC3-203ENST00000494426 ZNF804BA4D1E1 1349 aa29.33■■■□□ 2.29
CLIC3-203ENST00000494426 MED23Q9ULK4 1368 aa29.32■■■□□ 2.28
CLIC3-203ENST00000494426 PTPN12Q05209 780 aaKnown RBP29.32■■■□□ 2.28
CLIC3-203ENST00000494426 TXNRD3Q86VQ6 643 aa29.32■■■□□ 2.28
CLIC3-203ENST00000494426 ECE2O60344 883 aa29.31■■■□□ 2.28
CLIC3-203ENST00000494426 GNAI2P04899 355 aa29.31■■■□□ 2.28
CLIC3-203ENST00000494426 VEGFAP15692 232 aaPredicted RBP29.31■■■□□ 2.28
CLIC3-203ENST00000494426 KCNQ5Q9NR82 932 aa29.31■■■□□ 2.28
CLIC3-203ENST00000494426 GJA3Q9Y6H8 435 aa29.31■■■□□ 2.28
CLIC3-203ENST00000494426 SCN9AQ15858 1988 aa29.3■■■□□ 2.28
CLIC3-203ENST00000494426 IRS2Q9Y4H2 1338 aa29.3■■■□□ 2.28
CLIC3-203ENST00000494426 KLRK1P26718 216 aa29.3■■■□□ 2.28
CLIC3-203ENST00000494426 RAD17O75943 681 aa29.29■■■□□ 2.28
CLIC3-203ENST00000494426 MS4A1P11836 297 aa29.29■■■□□ 2.28
CLIC3-203ENST00000494426 MTX1Q13505 466 aa29.29■■■□□ 2.28
CLIC3-203ENST00000494426 SCN4AP35499 1836 aa29.29■■■□□ 2.28
CLIC3-203ENST00000494426 CIAPIN1Q6FI81 312 aa29.28■■■□□ 2.28
CLIC3-203ENST00000494426 MROH5Q6ZUA9 1318 aa29.27■■■□□ 2.28
CLIC3-203ENST00000494426 EYA2O00167 538 aa29.26■■■□□ 2.27
CLIC3-203ENST00000494426 KCNJ4P48050 445 aa29.26■■■□□ 2.27
CLIC3-203ENST00000494426 C20orf194Q5TEA3 1177 aa29.26■■■□□ 2.27
CLIC3-203ENST00000494426 G3V3G9 751 aa29.25■■■□□ 2.27
CLIC3-203ENST00000494426 MVPQ14764 893 aaKnown RBP29.25■■■□□ 2.27
CLIC3-203ENST00000494426 DCAF8Q5TAQ9 597 aa29.25■■■□□ 2.27
CLIC3-203ENST00000494426 C15orf52Q6ZUT6 534 aaKnown RBP29.25■■■□□ 2.27
CLIC3-203ENST00000494426 ATG9AQ7Z3C6 839 aa29.25■■■□□ 2.27
CLIC3-203ENST00000494426 VGLL2Q8N8G2 317 aa29.25■■■□□ 2.27
CLIC3-203ENST00000494426 PA2G4Q9UQ80 394 aaKnown RBP29.25■■■□□ 2.27
CLIC3-203ENST00000494426 PSME4Q14997 1843 aa29.24■■■□□ 2.27
CLIC3-203ENST00000494426 SRGAP3O43295 1099 aa29.24■■■□□ 2.27
CLIC3-203ENST00000494426 SCNN1DP51172 638 aa29.24■■■□□ 2.27
CLIC3-203ENST00000494426 TNIP1Q15025 636 aa29.24■■■□□ 2.27
CLIC3-203ENST00000494426 C1orf115Q9H7X2 142 aa29.24■■■□□ 2.27
CLIC3-203ENST00000494426 COPRSQ9NQ92 184 aa29.24■■■□□ 2.27
CLIC3-203ENST00000494426 COG6Q9Y2V7 657 aa29.24■■■□□ 2.27
CLIC3-203ENST00000494426 PNMA6EA0A0J9YXQ4 647 aa29.23■■■□□ 2.27
CLIC3-203ENST00000494426 PSMD14O00487 310 aa29.23■■■□□ 2.27
CLIC3-203ENST00000494426 METTL24Q5JXM2 366 aa29.23■■■□□ 2.27
CLIC3-203ENST00000494426 PODNQ7Z5L7 613 aa29.23■■■□□ 2.27
CLIC3-203ENST00000494426 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms