RNA–Protein interactions for RNA: ENST00000494299.1

SAPCD1-211, Transcript of suppressor APC domain containing 1, humanhuman

TSL 3

Gene SAPCD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-211ENST00000494299 NSFL1CQ9UNZ2 370 aaKnown RBP16.9■□□□□ 0.3
SAPCD1-211ENST00000494299 ANKRD18AQ8IVF6 992 aa16.89■□□□□ 0.29
SAPCD1-211ENST00000494299 GPRC5DQ9NZD1 345 aa16.89■□□□□ 0.29
SAPCD1-211ENST00000494299 MINPP1Q9UNW1 487 aa16.89■□□□□ 0.29
SAPCD1-211ENST00000494299 PTPRCP08575 1304 aa16.89■□□□□ 0.29
SAPCD1-211ENST00000494299 XDHP47989 1333 aa16.89■□□□□ 0.29
SAPCD1-211ENST00000494299 GRM8O00222 908 aa16.88■□□□□ 0.29
SAPCD1-211ENST00000494299 DIEXFQ68CQ4 756 aaKnown RBP16.88■□□□□ 0.29
SAPCD1-211ENST00000494299 MIER1Q8N108 512 aa16.88■□□□□ 0.29
SAPCD1-211ENST00000494299 EPS15P42566 896 aa16.87■□□□□ 0.29
SAPCD1-211ENST00000494299 CIAPIN1Q6FI81 312 aa16.87■□□□□ 0.29
SAPCD1-211ENST00000494299 KAZALD1Q96I82 304 aa16.87■□□□□ 0.29
SAPCD1-211ENST00000494299 CCDC85AQ96PX6 553 aaPredicted RBP16.87■□□□□ 0.29
SAPCD1-211ENST00000494299 EYA3Q99504 573 aa16.87■□□□□ 0.29
SAPCD1-211ENST00000494299 PGAP2Q9UHJ9 254 aa16.87■□□□□ 0.29
SAPCD1-211ENST00000494299 ITGA6P23229 1130 aa16.86■□□□□ 0.29
SAPCD1-211ENST00000494299 TNIP1Q15025 636 aa16.86■□□□□ 0.29
SAPCD1-211ENST00000494299 FAM161AQ3B820 660 aa16.86■□□□□ 0.29
SAPCD1-211ENST00000494299 EPHA10Q5JZY3 1008 aa16.86■□□□□ 0.29
SAPCD1-211ENST00000494299 USP50Q70EL3 339 aaPredicted RBP16.86■□□□□ 0.29
SAPCD1-211ENST00000494299 DPF2Q92785 391 aa16.86■□□□□ 0.29
SAPCD1-211ENST00000494299 GGA1Q9UJY5 639 aa16.86■□□□□ 0.29
SAPCD1-211ENST00000494299 GJA3Q9Y6H8 435 aa16.86■□□□□ 0.29
SAPCD1-211ENST00000494299 IRS2Q9Y4H2 1338 aa16.86■□□□□ 0.29
SAPCD1-211ENST00000494299 WTIPA6NIX2 430 aaPredicted RBP16.85■□□□□ 0.29
SAPCD1-211ENST00000494299 JMYQ8N9B5 988 aa16.85■□□□□ 0.29
SAPCD1-211ENST00000494299 SRCIN1Q9C0H9 1055 aa16.85■□□□□ 0.29
SAPCD1-211ENST00000494299 MED23Q9ULK4 1368 aa16.85■□□□□ 0.29
SAPCD1-211ENST00000494299 C6orf229H3BNL8 230 aa16.84■□□□□ 0.29
SAPCD1-211ENST00000494299 ECE2O60344 883 aa16.84■□□□□ 0.29
SAPCD1-211ENST00000494299 RAD17O75943 681 aa16.84■□□□□ 0.29
SAPCD1-211ENST00000494299 UFL1O94874 794 aa16.84■□□□□ 0.29
SAPCD1-211ENST00000494299 VIL1P09327 827 aaKnown RBP16.84■□□□□ 0.29
SAPCD1-211ENST00000494299 ATP2B4P23634 1241 aa16.84■□□□□ 0.29
SAPCD1-211ENST00000494299 GMPSP49915 693 aaPredicted RBP16.84■□□□□ 0.29
SAPCD1-211ENST00000494299 GPR101Q96P66 508 aaPredicted RBP16.84■□□□□ 0.29
SAPCD1-211ENST00000494299 KCNQ5Q9NR82 932 aa16.84■□□□□ 0.29
SAPCD1-211ENST00000494299 ADARB2Q9NS39 739 aaKnown RBP16.84■□□□□ 0.29
SAPCD1-211ENST00000494299 ANKIB1Q9P2G1 1089 aa16.84■□□□□ 0.29
SAPCD1-211ENST00000494299 PSMD14O00487 310 aa16.83■□□□□ 0.28
SAPCD1-211ENST00000494299 HTRA3P83110 453 aa16.83■□□□□ 0.28
SAPCD1-211ENST00000494299 RABL6Q3YEC7 729 aaPredicted RBP16.83■□□□□ 0.28
SAPCD1-211ENST00000494299 KLRG1Q96E93 195 aa16.83■□□□□ 0.28
SAPCD1-211ENST00000494299 TRPM7Q96QT4 1865 aa16.83■□□□□ 0.28
SAPCD1-211ENST00000494299 ZC3H12CQ9C0D7 883 aaKnown RBP16.83■□□□□ 0.28
SAPCD1-211ENST00000494299 DBNDD1Q9H9R9 158 aa16.83■□□□□ 0.28
SAPCD1-211ENST00000494299 LEMD3Q9Y2U8 911 aa16.83■□□□□ 0.28
SAPCD1-211ENST00000494299 NBPF7P0C2Y1 421 aaPredicted RBP16.82■□□□□ 0.28
SAPCD1-211ENST00000494299 RPS12P25398 132 aaKnown RBP16.82■□□□□ 0.28
SAPCD1-211ENST00000494299 LMOD1P29536 600 aaPredicted RBP16.82■□□□□ 0.28
SAPCD1-211ENST00000494299 CCT4P50991 539 aaKnown RBP16.82■□□□□ 0.28
SAPCD1-211ENST00000494299 HIRAP54198 1017 aaPredicted RBP16.82■□□□□ 0.28
SAPCD1-211ENST00000494299 C15orf52Q6ZUT6 534 aaKnown RBP16.82■□□□□ 0.28
SAPCD1-211ENST00000494299 GMLQ99445 158 aa16.82■□□□□ 0.28
SAPCD1-211ENST00000494299 CREBZFQ9NS37 354 aa16.82■□□□□ 0.28
SAPCD1-211ENST00000494299 RIMBP2O15034 1052 aa16.81■□□□□ 0.28
SAPCD1-211ENST00000494299 IGHMBP2P38935 993 aaKnown RBP16.81■□□□□ 0.28
SAPCD1-211ENST00000494299 LMBR1LQ6UX01 489 aa16.81■□□□□ 0.28
SAPCD1-211ENST00000494299 PODNQ7Z5L7 613 aa16.81■□□□□ 0.28
SAPCD1-211ENST00000494299 CNTROBQ8N137 903 aa16.81■□□□□ 0.28
SAPCD1-211ENST00000494299 ZC3H15Q8WU90 426 aaKnown RBP16.81■□□□□ 0.28
SAPCD1-211ENST00000494299 USP44Q9H0E7 712 aa16.81■□□□□ 0.28
SAPCD1-211ENST00000494299 POLR2AP24928 1970 aaKnown RBP16.8■□□□□ 0.28
SAPCD1-211ENST00000494299 ANKRD18BA2A2Z9 1011 aa16.8■□□□□ 0.28
SAPCD1-211ENST00000494299 RARSP54136 660 aaKnown RBP16.8■□□□□ 0.28
SAPCD1-211ENST00000494299 IFIT5Q13325 482 aaKnown RBP16.8■□□□□ 0.28
SAPCD1-211ENST00000494299 DOK7Q18PE1 504 aa16.8■□□□□ 0.28
SAPCD1-211ENST00000494299 EAPPQ56P03 285 aaPredicted RBP16.8■□□□□ 0.28
SAPCD1-211ENST00000494299 SLC4A10Q6U841 1118 aa16.8■□□□□ 0.28
SAPCD1-211ENST00000494299 SUCLG2Q96I99 432 aa16.8■□□□□ 0.28
SAPCD1-211ENST00000494299 ANKRD2Q9GZV1 360 aa16.8■□□□□ 0.28
SAPCD1-211ENST00000494299 C9orf78Q9NZ63 289 aaPredicted RBP16.8■□□□□ 0.28
SAPCD1-211ENST00000494299 CNOT7Q9UIV1 285 aaKnown RBP16.8■□□□□ 0.28
SAPCD1-211ENST00000494299 SHTN1A0MZ66 631 aa16.79■□□□□ 0.28
SAPCD1-211ENST00000494299 MAP1SQ66K74 1059 aaPredicted RBP16.79■□□□□ 0.28
SAPCD1-211ENST00000494299 TXNRD3Q86VQ6 643 aa16.79■□□□□ 0.28
SAPCD1-211ENST00000494299 ANKRD44Q8N8A2 993 aa16.79■□□□□ 0.28
SAPCD1-211ENST00000494299 BCL2L13Q9BXK5 485 aa16.79■□□□□ 0.28
SAPCD1-211ENST00000494299 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
SAPCD1-211ENST00000494299 ZNF804BA4D1E1 1349 aa16.78■□□□□ 0.28
SAPCD1-211ENST00000494299 ZNF280AP59817 542 aaPredicted RBP16.78■□□□□ 0.28
SAPCD1-211ENST00000494299 CHRNDQ07001 517 aa16.78■□□□□ 0.28
SAPCD1-211ENST00000494299 TRPM4Q8TD43 1214 aa16.78■□□□□ 0.28
SAPCD1-211ENST00000494299 ARHGAP45Q92619 1136 aa16.78■□□□□ 0.28
SAPCD1-211ENST00000494299 SMC4Q9NTJ3 1288 aa16.78■□□□□ 0.28
SAPCD1-211ENST00000494299 MICALL2Q8IY33 904 aa16.77■□□□□ 0.28
SAPCD1-211ENST00000494299 AGBL3Q8NEM8 1001 aa16.77■□□□□ 0.28
SAPCD1-211ENST00000494299 MPHOSPH8Q99549 860 aa16.77■□□□□ 0.28
SAPCD1-211ENST00000494299 COA1Q9GZY4 146 aa16.77■□□□□ 0.28
SAPCD1-211ENST00000494299 EGFRP00533 1210 aa16.76■□□□□ 0.27
SAPCD1-211ENST00000494299 KLRK1P26718 216 aa16.76■□□□□ 0.27
SAPCD1-211ENST00000494299 RSBN1LQ6PCB5 846 aaPredicted RBP16.76■□□□□ 0.27
SAPCD1-211ENST00000494299 BICC1Q9H694 974 aaKnown RBP16.76■□□□□ 0.27
SAPCD1-211ENST00000494299 RIPOR2Q9Y4F9 1068 aa16.76■□□□□ 0.27
SAPCD1-211ENST00000494299 CNTNAP1P78357 1384 aa16.76■□□□□ 0.27
SAPCD1-211ENST00000494299 TMEM88BA6NKF7 163 aa16.75■□□□□ 0.27
SAPCD1-211ENST00000494299 CCDC57Q2TAC2 916 aa16.75■□□□□ 0.27
SAPCD1-211ENST00000494299 DACT2Q5SW24 774 aa16.75■□□□□ 0.27
SAPCD1-211ENST00000494299 NOB1Q9ULX3 412 aaKnown RBP16.75■□□□□ 0.27
SAPCD1-211ENST00000494299 CLEC11AQ9Y240 323 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms