RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 FOXO4P98177 505 aa18.62■□□□□ 0.57
ATG4B-224ENST00000494132 CXCL9Q07325 125 aa18.62■□□□□ 0.57
ATG4B-224ENST00000494132 DOK7Q18PE1 504 aa18.62■□□□□ 0.57
ATG4B-224ENST00000494132 VPS33BQ9H267 617 aa18.62■□□□□ 0.57
ATG4B-224ENST00000494132 HACL1Q9UJ83 578 aa18.62■□□□□ 0.57
ATG4B-224ENST00000494132 PTPRCP08575 1304 aa18.62■□□□□ 0.57
ATG4B-224ENST00000494132 PSME4Q14997 1843 aa18.61■□□□□ 0.57
ATG4B-224ENST00000494132 ADAMTSL1Q8N6G6 1762 aa18.61■□□□□ 0.57
ATG4B-224ENST00000494132 CSF1RP07333 972 aa18.61■□□□□ 0.57
ATG4B-224ENST00000494132 NBPF7P0C2Y1 421 aaPredicted RBP18.61■□□□□ 0.57
ATG4B-224ENST00000494132 EPHX2P34913 555 aa18.61■□□□□ 0.57
ATG4B-224ENST00000494132 HTRA3P83110 453 aa18.61■□□□□ 0.57
ATG4B-224ENST00000494132 FSTL1Q12841 308 aa18.61■□□□□ 0.57
ATG4B-224ENST00000494132 GGA1Q9UJY5 639 aa18.61■□□□□ 0.57
ATG4B-224ENST00000494132 XDHP47989 1333 aa18.6■□□□□ 0.57
ATG4B-224ENST00000494132 IGHMBP2P38935 993 aaKnown RBP18.6■□□□□ 0.57
ATG4B-224ENST00000494132 SCNN1DP51172 638 aa18.6■□□□□ 0.57
ATG4B-224ENST00000494132 LMBR1LQ6UX01 489 aa18.6■□□□□ 0.57
ATG4B-224ENST00000494132 SUCLG2Q96I99 432 aa18.6■□□□□ 0.57
ATG4B-224ENST00000494132 PODXL2Q9NZ53 605 aa18.6■□□□□ 0.57
ATG4B-224ENST00000494132 MINPP1Q9UNW1 487 aa18.6■□□□□ 0.57
ATG4B-224ENST00000494132 ECE2O60344 883 aa18.59■□□□□ 0.57
ATG4B-224ENST00000494132 EPS15P42566 896 aa18.59■□□□□ 0.57
ATG4B-224ENST00000494132 CIAPIN1Q6FI81 312 aa18.59■□□□□ 0.57
ATG4B-224ENST00000494132 EYA3Q99504 573 aa18.59■□□□□ 0.57
ATG4B-224ENST00000494132 KCNQ5Q9NR82 932 aa18.59■□□□□ 0.57
ATG4B-224ENST00000494132 BSDC1Q9NW68 430 aaPredicted RBP18.59■□□□□ 0.57
ATG4B-224ENST00000494132 NOB1Q9ULX3 412 aaKnown RBP18.59■□□□□ 0.57
ATG4B-224ENST00000494132 ANKRD18BA2A2Z9 1011 aa18.58■□□□□ 0.56
ATG4B-224ENST00000494132 CT47B1P0C2W7 299 aaPredicted RBP18.58■□□□□ 0.56
ATG4B-224ENST00000494132 LMOD1P29536 600 aaPredicted RBP18.58■□□□□ 0.56
ATG4B-224ENST00000494132 RARSP54136 660 aaKnown RBP18.58■□□□□ 0.56
ATG4B-224ENST00000494132 ZNF594Q96JF6 807 aaPredicted RBP18.58■□□□□ 0.56
ATG4B-224ENST00000494132 MPHOSPH8Q99549 860 aa18.58■□□□□ 0.56
ATG4B-224ENST00000494132 ZC3H12CQ9C0D7 883 aaKnown RBP18.58■□□□□ 0.56
ATG4B-224ENST00000494132 CLEC11AQ9Y240 323 aa18.58■□□□□ 0.56
ATG4B-224ENST00000494132 GMPSP49915 693 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-224ENST00000494132 IFIT5Q13325 482 aaKnown RBP18.57■□□□□ 0.56
ATG4B-224ENST00000494132 CHADLQ6NUI6 762 aa18.57■□□□□ 0.56
ATG4B-224ENST00000494132 KAZALD1Q96I82 304 aa18.57■□□□□ 0.56
ATG4B-224ENST00000494132 ZBTB12Q9Y330 459 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-224ENST00000494132 POLR2AP24928 1970 aaKnown RBP18.57■□□□□ 0.56
ATG4B-224ENST00000494132 ZNF646O15015 1829 aaPredicted RBP18.56■□□□□ 0.56
ATG4B-224ENST00000494132 SHTN1A0MZ66 631 aa18.56■□□□□ 0.56
ATG4B-224ENST00000494132 G3V3G9 751 aa18.56■□□□□ 0.56
ATG4B-224ENST00000494132 PSMD14O00487 310 aa18.56■□□□□ 0.56
ATG4B-224ENST00000494132 CCT4P50991 539 aaKnown RBP18.56■□□□□ 0.56
ATG4B-224ENST00000494132 DCAF8Q5TAQ9 597 aa18.56■□□□□ 0.56
ATG4B-224ENST00000494132 ATP2B4P23634 1241 aa18.55■□□□□ 0.56
ATG4B-224ENST00000494132 APLP1P51693 650 aa18.55■□□□□ 0.56
ATG4B-224ENST00000494132 LDHDQ86WU2 507 aa18.55■□□□□ 0.56
ATG4B-224ENST00000494132 HELBQ8NG08 1087 aaPredicted RBP18.55■□□□□ 0.56
ATG4B-224ENST00000494132 UTYO14607 1347 aa18.54■□□□□ 0.56
ATG4B-224ENST00000494132 SNAP23O00161 211 aa18.54■□□□□ 0.56
ATG4B-224ENST00000494132 TAF5LO75529 589 aa18.54■□□□□ 0.56
ATG4B-224ENST00000494132 BCAR3O75815 825 aa18.54■□□□□ 0.56
ATG4B-224ENST00000494132 KLRK1P26718 216 aa18.54■□□□□ 0.56
ATG4B-224ENST00000494132 CHRNDQ07001 517 aa18.54■□□□□ 0.56
ATG4B-224ENST00000494132 TNIP1Q15025 636 aa18.54■□□□□ 0.56
ATG4B-224ENST00000494132 BICC1Q9H694 974 aaKnown RBP18.54■□□□□ 0.56
ATG4B-224ENST00000494132 GPRC5DQ9NZD1 345 aa18.54■□□□□ 0.56
ATG4B-224ENST00000494132 TNNQ9UQP3 1299 aa18.54■□□□□ 0.56
ATG4B-224ENST00000494132 CCDC57Q2TAC2 916 aa18.53■□□□□ 0.56
ATG4B-224ENST00000494132 TAF7LQ5H9L4 462 aa18.53■□□□□ 0.56
ATG4B-224ENST00000494132 MAP1SQ66K74 1059 aaPredicted RBP18.53■□□□□ 0.56
ATG4B-224ENST00000494132 TXNRD3Q86VQ6 643 aa18.53■□□□□ 0.56
ATG4B-224ENST00000494132 USP44Q9H0E7 712 aa18.53■□□□□ 0.56
ATG4B-224ENST00000494132 ZBED9Q6R2W3 1325 aa18.52■□□□□ 0.56
ATG4B-224ENST00000494132 PNMA8AQ86V59 439 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-224ENST00000494132 ANKRD44Q8N8A2 993 aa18.52■□□□□ 0.56
ATG4B-224ENST00000494132 MED23Q9ULK4 1368 aa18.52■□□□□ 0.55
ATG4B-224ENST00000494132 ZNF804BA4D1E1 1349 aa18.51■□□□□ 0.55
ATG4B-224ENST00000494132 PLIN1O60240 522 aa18.51■□□□□ 0.55
ATG4B-224ENST00000494132 KCNJ4P48050 445 aa18.51■□□□□ 0.55
ATG4B-224ENST00000494132 BRPF1P55201 1214 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-224ENST00000494132 FRAT1Q92837 279 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-224ENST00000494132 API5Q9BZZ5 524 aaKnown RBP18.51■□□□□ 0.55
ATG4B-224ENST00000494132 ANKRD2Q9GZV1 360 aa18.51■□□□□ 0.55
ATG4B-224ENST00000494132 CNNM1Q9NRU3 951 aa18.51■□□□□ 0.55
ATG4B-224ENST00000494132 TRPM7Q96QT4 1865 aa18.51■□□□□ 0.55
ATG4B-224ENST00000494132 KIF16BQ96L93 1317 aa18.5■□□□□ 0.55
ATG4B-224ENST00000494132 LDHAL6AQ6ZMR3 332 aa18.5■□□□□ 0.55
ATG4B-224ENST00000494132 MICALL2Q8IY33 904 aa18.5■□□□□ 0.55
ATG4B-224ENST00000494132 TRPM4Q8TD43 1214 aa18.5■□□□□ 0.55
ATG4B-224ENST00000494132 PUS3Q9BZE2 481 aaKnown RBP18.5■□□□□ 0.55
ATG4B-224ENST00000494132 ADARB2Q9NS39 739 aaKnown RBP18.5■□□□□ 0.55
ATG4B-224ENST00000494132 CNOT7Q9UIV1 285 aaKnown RBP18.5■□□□□ 0.55
ATG4B-224ENST00000494132 CEP350Q5VT06 3117 aa18.5■□□□□ 0.55
ATG4B-224ENST00000494132 KLHDC4Q8TBB5 520 aa18.49■□□□□ 0.55
ATG4B-224ENST00000494132 FBXW7Q969H0 707 aa18.49■□□□□ 0.55
ATG4B-224ENST00000494132 LEMD3Q9Y2U8 911 aa18.49■□□□□ 0.55
ATG4B-224ENST00000494132 ITGBL1O95965 494 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-224ENST00000494132 FMR1Q06787 632 aaKnown RBP eCLIP18.48■□□□□ 0.55
ATG4B-224ENST00000494132 RABL6Q3YEC7 729 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-224ENST00000494132 USP50Q70EL3 339 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-224ENST00000494132 SAMD7Q7Z3H4 446 aa18.48■□□□□ 0.55
ATG4B-224ENST00000494132 CNTROBQ8N137 903 aa18.48■□□□□ 0.55
ATG4B-224ENST00000494132 PASKQ96RG2 1323 aa18.48■□□□□ 0.55
ATG4B-224ENST00000494132 EGFRP00533 1210 aa18.47■□□□□ 0.55
ATG4B-224ENST00000494132 TRIM27P14373 513 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms