RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 CHMP4AQ9BY43 222 aa10.95□□□□□ -0.66
LRCH3-219ENST00000494069 KCNQ5Q9NR82 932 aa10.95□□□□□ -0.66
LRCH3-219ENST00000494069 PCNTO95613 3336 aa10.94□□□□□ -0.66
LRCH3-219ENST00000494069 WTIPA6NIX2 430 aaPredicted RBP10.94□□□□□ -0.66
LRCH3-219ENST00000494069 C6orf229H3BNL8 230 aa10.94□□□□□ -0.66
LRCH3-219ENST00000494069 H7C1W4 665 aa10.94□□□□□ -0.66
LRCH3-219ENST00000494069 LMOD1P29536 600 aaPredicted RBP10.94□□□□□ -0.66
LRCH3-219ENST00000494069 FKBP5Q13451 457 aaPredicted RBP10.94□□□□□ -0.66
LRCH3-219ENST00000494069 DOK7Q18PE1 504 aa10.94□□□□□ -0.66
LRCH3-219ENST00000494069 WASHC4Q2M389 1173 aa10.94□□□□□ -0.66
LRCH3-219ENST00000494069 CCDC152Q4G0S7 254 aa10.94□□□□□ -0.66
LRCH3-219ENST00000494069 CIAPIN1Q6FI81 312 aa10.94□□□□□ -0.66
LRCH3-219ENST00000494069 PNMA8AQ86V59 439 aaPredicted RBP10.94□□□□□ -0.66
LRCH3-219ENST00000494069 CNTROBQ8N137 903 aa10.94□□□□□ -0.66
LRCH3-219ENST00000494069 TBC1D16Q8TBP0 767 aa10.94□□□□□ -0.66
LRCH3-219ENST00000494069 DBNDD1Q9H9R9 158 aa10.94□□□□□ -0.66
LRCH3-219ENST00000494069 GPRC5DQ9NZD1 345 aa10.94□□□□□ -0.66
LRCH3-219ENST00000494069 MKRN1Q9UHC7 482 aaKnown RBP10.94□□□□□ -0.66
LRCH3-219ENST00000494069 ADAMTSL1Q8N6G6 1762 aa10.94□□□□□ -0.66
LRCH3-219ENST00000494069 LRRC37AA6NMS7 1700 aa10.94□□□□□ -0.66
LRCH3-219ENST00000494069 CDHR2Q9BYE9 1310 aa10.93□□□□□ -0.66
LRCH3-219ENST00000494069 F6X3S4 739 aa10.93□□□□□ -0.66
LRCH3-219ENST00000494069 CTSWP56202 376 aa10.93□□□□□ -0.66
LRCH3-219ENST00000494069 NEXNQ0ZGT2 675 aa10.93□□□□□ -0.66
LRCH3-219ENST00000494069 UBE3BQ7Z3V4 1068 aa10.93□□□□□ -0.66
LRCH3-219ENST00000494069 TTLL11Q8NHH1 800 aa10.93□□□□□ -0.66
LRCH3-219ENST00000494069 DNAAF4Q8WXU2 420 aa10.93□□□□□ -0.66
LRCH3-219ENST00000494069 GREM2Q9H772 168 aa10.93□□□□□ -0.66
LRCH3-219ENST00000494069 CREBZFQ9NS37 354 aa10.93□□□□□ -0.66
LRCH3-219ENST00000494069 ZNF521Q96K83 1311 aa10.92□□□□□ -0.66
LRCH3-219ENST00000494069 TRAF5O00463 557 aa10.92□□□□□ -0.66
LRCH3-219ENST00000494069 HIRAP54198 1017 aaPredicted RBP10.92□□□□□ -0.66
LRCH3-219ENST00000494069 CASP7P55210 303 aa10.92□□□□□ -0.66
LRCH3-219ENST00000494069 GCKRQ14397 625 aa10.92□□□□□ -0.66
LRCH3-219ENST00000494069 PSMD14O00487 310 aa10.91□□□□□ -0.66
LRCH3-219ENST00000494069 ECE2O60344 883 aa10.91□□□□□ -0.66
LRCH3-219ENST00000494069 UFL1O94874 794 aa10.91□□□□□ -0.66
LRCH3-219ENST00000494069 HSP90B1P14625 803 aaKnown RBP10.91□□□□□ -0.66
LRCH3-219ENST00000494069 USP50Q70EL3 339 aaPredicted RBP10.91□□□□□ -0.66
LRCH3-219ENST00000494069 ANKRD18AQ8IVF6 992 aa10.91□□□□□ -0.66
LRCH3-219ENST00000494069 TRPM4Q8TD43 1214 aa10.91□□□□□ -0.66
LRCH3-219ENST00000494069 BCL2L13Q9BXK5 485 aa10.91□□□□□ -0.66
LRCH3-219ENST00000494069 MYH16Q9H6N6 1097 aa10.91□□□□□ -0.66
LRCH3-219ENST00000494069 ADARB2Q9NS39 739 aaKnown RBP10.91□□□□□ -0.66
LRCH3-219ENST00000494069 PODXL2Q9NZ53 605 aa10.91□□□□□ -0.66
LRCH3-219ENST00000494069 ANKIB1Q9P2G1 1089 aa10.91□□□□□ -0.66
LRCH3-219ENST00000494069 RTL9Q8NET4 1388 aa10.9□□□□□ -0.66
LRCH3-219ENST00000494069 TMEM88BA6NKF7 163 aa10.9□□□□□ -0.66
LRCH3-219ENST00000494069 EGFRP00533 1210 aa10.9□□□□□ -0.66
LRCH3-219ENST00000494069 TNIP1Q15025 636 aa10.9□□□□□ -0.66
LRCH3-219ENST00000494069 BEND3Q5T5X7 828 aa10.9□□□□□ -0.66
LRCH3-219ENST00000494069 LINS1Q8NG48 757 aa10.9□□□□□ -0.66
LRCH3-219ENST00000494069 EYA3Q99504 573 aa10.9□□□□□ -0.66
LRCH3-219ENST00000494069 ZC3H12CQ9C0D7 883 aaKnown RBP10.9□□□□□ -0.66
LRCH3-219ENST00000494069 CNOT7Q9UIV1 285 aaKnown RBP10.9□□□□□ -0.66
LRCH3-219ENST00000494069 GGA1Q9UJY5 639 aa10.9□□□□□ -0.66
LRCH3-219ENST00000494069 FAM161AQ3B820 660 aa10.89□□□□□ -0.67
LRCH3-219ENST00000494069 DLK2Q6UY11 383 aa10.89□□□□□ -0.67
LRCH3-219ENST00000494069 SAMD7Q7Z3H4 446 aa10.89□□□□□ -0.67
LRCH3-219ENST00000494069 MICALL2Q8IY33 904 aa10.89□□□□□ -0.67
LRCH3-219ENST00000494069 CDC5LQ99459 802 aaKnown RBP10.89□□□□□ -0.67
LRCH3-219ENST00000494069 MINPP1Q9UNW1 487 aa10.89□□□□□ -0.67
LRCH3-219ENST00000494069 CNTNAP1P78357 1384 aa10.89□□□□□ -0.67
LRCH3-219ENST00000494069 XDHP47989 1333 aa10.88□□□□□ -0.67
LRCH3-219ENST00000494069 CSF1RP07333 972 aa10.88□□□□□ -0.67
LRCH3-219ENST00000494069 HSPA1AP0DMV8 641 aaKnown RBP10.88□□□□□ -0.67
LRCH3-219ENST00000494069 HSPA1BP0DMV9 641 aaKnown RBP10.88□□□□□ -0.67
LRCH3-219ENST00000494069 PRKAR2AP13861 404 aaKnown RBP10.88□□□□□ -0.67
LRCH3-219ENST00000494069 ITGA6P23229 1130 aa10.88□□□□□ -0.67
LRCH3-219ENST00000494069 VEGFBP49765 207 aa10.88□□□□□ -0.67
LRCH3-219ENST00000494069 TBC1D10BQ4KMP7 808 aaPredicted RBP10.88□□□□□ -0.67
LRCH3-219ENST00000494069 EPHA10Q5JZY3 1008 aa10.88□□□□□ -0.67
LRCH3-219ENST00000494069 CST9Q5W186 159 aa10.88□□□□□ -0.67
LRCH3-219ENST00000494069 CDCA7LQ96GN5 454 aa10.88□□□□□ -0.67
LRCH3-219ENST00000494069 PLA2G12BQ9BX93 195 aa10.88□□□□□ -0.67
LRCH3-219ENST00000494069 GLIS2Q9BZE0 524 aaPredicted RBP10.88□□□□□ -0.67
LRCH3-219ENST00000494069 BSDC1Q9NW68 430 aaPredicted RBP10.88□□□□□ -0.67
LRCH3-219ENST00000494069 SCN9AQ15858 1988 aa10.87□□□□□ -0.67
LRCH3-219ENST00000494069 G3V3G9 751 aa10.87□□□□□ -0.67
LRCH3-219ENST00000494069 VIL1P09327 827 aaKnown RBP10.87□□□□□ -0.67
LRCH3-219ENST00000494069 PRR29P0C7W0 189 aa10.87□□□□□ -0.67
LRCH3-219ENST00000494069 ATP2B4P23634 1241 aa10.87□□□□□ -0.67
LRCH3-219ENST00000494069 KLRK1P26718 216 aa10.87□□□□□ -0.67
LRCH3-219ENST00000494069 FOXO4P98177 505 aa10.87□□□□□ -0.67
LRCH3-219ENST00000494069 RBM26Q5T8P6 1007 aaKnown RBP10.87□□□□□ -0.67
LRCH3-219ENST00000494069 DCAF8Q5TAQ9 597 aa10.87□□□□□ -0.67
LRCH3-219ENST00000494069 COL13A1Q5TAT6 717 aaPredicted RBP10.87□□□□□ -0.67
LRCH3-219ENST00000494069 SLC4A10Q6U841 1118 aa10.87□□□□□ -0.67
LRCH3-219ENST00000494069 TXNRD3Q86VQ6 643 aa10.87□□□□□ -0.67
LRCH3-219ENST00000494069 PGAP2Q9UHJ9 254 aa10.87□□□□□ -0.67
LRCH3-219ENST00000494069 ABT1Q9ULW3 272 aaKnown RBP10.87□□□□□ -0.67
LRCH3-219ENST00000494069 H7C1D1 291 aa10.86□□□□□ -0.67
LRCH3-219ENST00000494069 SNAP23O00161 211 aa10.86□□□□□ -0.67
LRCH3-219ENST00000494069 IGHMBP2P38935 993 aaKnown RBP10.86□□□□□ -0.67
LRCH3-219ENST00000494069 SLFN5Q08AF3 891 aa10.86□□□□□ -0.67
LRCH3-219ENST00000494069 MRPL50Q8N5N7 158 aaKnown RBP10.86□□□□□ -0.67
LRCH3-219ENST00000494069 DPF2Q92785 391 aa10.86□□□□□ -0.67
LRCH3-219ENST00000494069 MXD3Q9BW11 206 aa10.86□□□□□ -0.67
LRCH3-219ENST00000494069 SPEF2Q9C093 1822 aa10.86□□□□□ -0.67
LRCH3-219ENST00000494069 ASTN2O75129 1339 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms