RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 RPS6KA4O75676 772 aa8.14□□□□□ -1.11
FNDC3B-212ENST00000494000 CIAO1O76071 339 aa8.14□□□□□ -1.11
FNDC3B-212ENST00000494000 ITPK1Q13572 414 aa8.14□□□□□ -1.11
FNDC3B-212ENST00000494000 NLRP10Q86W26 655 aa8.14□□□□□ -1.11
FNDC3B-212ENST00000494000 GPR108Q9NPR9 543 aa8.14□□□□□ -1.11
FNDC3B-212ENST00000494000 ZNF330Q9Y3S2 320 aaPredicted RBP8.14□□□□□ -1.11
FNDC3B-212ENST00000494000 FOXO4P98177 505 aa8.14□□□□□ -1.11
FNDC3B-212ENST00000494000 GABBR1Q9UBS5 961 aa8.14□□□□□ -1.11
FNDC3B-212ENST00000494000 GLRX3O76003 335 aaKnown RBP8.13□□□□□ -1.11
FNDC3B-212ENST00000494000 CSF1RP07333 972 aa8.13□□□□□ -1.11
FNDC3B-212ENST00000494000 IFIT2P09913 472 aaKnown RBP8.13□□□□□ -1.11
FNDC3B-212ENST00000494000 IL15P40933 162 aaPredicted RBP8.13□□□□□ -1.11
FNDC3B-212ENST00000494000 CCNL1Q9UK58 526 aaPredicted RBP8.13□□□□□ -1.11
FNDC3B-212ENST00000494000 TAF1LQ8IZX4 1826 aa8.13□□□□□ -1.11
FNDC3B-212ENST00000494000 SCN7AQ01118 1682 aa8.13□□□□□ -1.11
FNDC3B-212ENST00000494000 PDE8AO60658 829 aa8.13□□□□□ -1.11
FNDC3B-212ENST00000494000 CAMTA2O94983 1202 aa8.13□□□□□ -1.11
FNDC3B-212ENST00000494000 POLD1P28340 1107 aa8.13□□□□□ -1.11
FNDC3B-212ENST00000494000 RFX5P48382 616 aaPredicted RBP8.13□□□□□ -1.11
FNDC3B-212ENST00000494000 CCDC57Q2TAC2 916 aa8.13□□□□□ -1.11
FNDC3B-212ENST00000494000 LMBR1LQ6UX01 489 aa8.13□□□□□ -1.11
FNDC3B-212ENST00000494000 FBXO41Q8TF61 875 aa8.13□□□□□ -1.11
FNDC3B-212ENST00000494000 RNF25Q96BH1 459 aaPredicted RBP8.13□□□□□ -1.11
FNDC3B-212ENST00000494000 ZC3H4Q9UPT8 1303 aaKnown RBP8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 MYH3P11055 1940 aa8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 LAMB2P55268 1798 aa8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 PTPN12Q05209 780 aaKnown RBP8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 ANKRD13AQ8IZ07 590 aa8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 UTP14AQ9BVJ6 771 aaKnown RBP8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 NYXQ9GZU5 481 aa8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 RTCBQ9Y3I0 505 aaKnown RBP8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 SH3TC1Q8TE82 1336 aa8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 KIF4AO95239 1232 aa8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 ARMCX6Q7L4S7 300 aa8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 LINC00116Q8NCU8 138 aa8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 ECHDC1Q9NTX5 307 aa8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 NARFQ9UHQ1 456 aa8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 TRMT112Q9UI30 125 aaKnown RBP8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 AKAP2Q9Y2D5 859 aa8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 RTL9Q8NET4 1388 aa8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 MYH14Q7Z406 1995 aaKnown RBP8.12□□□□□ -1.11
FNDC3B-212ENST00000494000 BRWD3Q6RI45 1802 aa8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 HIP1O00291 1037 aa8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 REC8O95072 547 aa8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 IFIT5Q13325 482 aaKnown RBP8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 HLFQ16534 295 aa8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 EPHA10Q5JZY3 1008 aa8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 RINLQ6ZS11 566 aa8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 C16orf71Q8IYS4 520 aaPredicted RBP8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 CNTROBQ8N137 903 aa8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 IPO9Q96P70 1041 aaKnown RBP8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 TBC1D2BQ9UPU7 963 aa8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 TUBGCP6Q96RT7 1819 aa8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 C4BP0C0L5 1744 aa8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 EYA2O00167 538 aa8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 IRS4O14654 1257 aaPredicted RBP8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 GSPT1P15170 499 aaKnown RBP8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 RXRBP28702 533 aa8.11□□□□□ -1.11
FNDC3B-212ENST00000494000 ANKRD18BA2A2Z9 1011 aa8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 ZPR1O75312 459 aa8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 SASH1O94885 1247 aa8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 PARNO95453 639 aaKnown RBP8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 SDSP20132 328 aa8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 CTSWP56202 376 aa8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 TBC1D9Q6ZT07 1266 aa8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 TBC1D32Q96NH3 1257 aa8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 CHMP3Q9Y3E7 222 aa8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 RGPD3A6NKT7 1758 aaPredicted RBP8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 RGPD4Q7Z3J3 1758 aa8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 PLSCR1O15162 318 aa8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 BECN1Q14457 450 aa8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 AACSQ86V21 672 aa8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 IL1RAPL2Q9NP60 686 aa8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 PA2G4Q9UQ80 394 aaKnown RBP8.1□□□□□ -1.11
FNDC3B-212ENST00000494000 RFX7Q2KHR2 1363 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 ZMYND10O75800 440 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 RHBDL3P58872 404 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 CCDC152Q4G0S7 254 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 RUFY2Q8WXA3 655 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 FAM89AQ96GI7 184 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 C22orf23Q9BZE7 217 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 CEP126Q9P2H0 1117 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 NIP7Q9Y221 180 aaKnown RBP eCLIP8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 ABCC12Q96J65 1359 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 AK9Q5TCS8 1911 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 GPTP24298 496 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 SSFA2P28290 1259 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 SKIV2LQ15477 1246 aaKnown RBP8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 TNNI3KQ59H18 835 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 TRAPPC3LQ5T215 181 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 TTLL11Q8NHH1 800 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 PI4K2BQ8TCG2 481 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 OTUD7AQ8TE49 926 aaPredicted RBP8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 FPGT-TNNI3KV9GXZ4 949 aa8.09□□□□□ -1.11
FNDC3B-212ENST00000494000 COL24A1Q17RW2 1714 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 TRIM6-TRIM34B2RNG4 842 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 GNPATO15228 680 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 ATP5JP18859 108 aa8.08□□□□□ -1.12
FNDC3B-212ENST00000494000 SLC10A5Q5PT55 438 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms