RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 API5Q9BZZ5 524 aaKnown RBP20.39■□□□□ 0.85
SATB1-217ENST00000493952 ANKIB1Q9P2G1 1089 aa20.39■□□□□ 0.85
SATB1-217ENST00000493952 CHMP3Q9Y3E7 222 aa20.39■□□□□ 0.85
SATB1-217ENST00000493952 ADAMTSL1Q8N6G6 1762 aa20.39■□□□□ 0.85
SATB1-217ENST00000493952 ANKRD18BA2A2Z9 1011 aa20.38■□□□□ 0.85
SATB1-217ENST00000493952 RIMBP2O15034 1052 aa20.38■□□□□ 0.85
SATB1-217ENST00000493952 IGHMBP2P38935 993 aaKnown RBP20.38■□□□□ 0.85
SATB1-217ENST00000493952 C16orf71Q8IYS4 520 aaPredicted RBP20.38■□□□□ 0.85
SATB1-217ENST00000493952 GPC2Q8N158 579 aa20.38■□□□□ 0.85
SATB1-217ENST00000493952 L3MBTL3Q96JM7 780 aaPredicted RBP20.38■□□□□ 0.85
SATB1-217ENST00000493952 USP44Q9H0E7 712 aa20.38■□□□□ 0.85
SATB1-217ENST00000493952 UFL1O94874 794 aa20.37■□□□□ 0.85
SATB1-217ENST00000493952 CCT4P50991 539 aaKnown RBP20.37■□□□□ 0.85
SATB1-217ENST00000493952 IFIT5Q13325 482 aaKnown RBP20.37■□□□□ 0.85
SATB1-217ENST00000493952 ARHGAP45Q92619 1136 aa20.37■□□□□ 0.85
SATB1-217ENST00000493952 GGA1Q9UJY5 639 aa20.37■□□□□ 0.85
SATB1-217ENST00000493952 ZNRF3Q9ULT6 936 aa20.37■□□□□ 0.85
SATB1-217ENST00000493952 MINPP1Q9UNW1 487 aa20.37■□□□□ 0.85
SATB1-217ENST00000493952 EYA3Q99504 573 aa20.36■□□□□ 0.85
SATB1-217ENST00000493952 MPHOSPH8Q99549 860 aa20.36■□□□□ 0.85
SATB1-217ENST00000493952 GJA3Q9Y6H8 435 aa20.36■□□□□ 0.85
SATB1-217ENST00000493952 WTIPA6NIX2 430 aaPredicted RBP20.35■□□□□ 0.85
SATB1-217ENST00000493952 YDJCA8MPS7 323 aa20.35■□□□□ 0.85
SATB1-217ENST00000493952 RBM46Q8TBY0 533 aaKnown RBP20.35■□□□□ 0.85
SATB1-217ENST00000493952 ZNF594Q96JF6 807 aaPredicted RBP20.35■□□□□ 0.85
SATB1-217ENST00000493952 BICC1Q9H694 974 aaKnown RBP20.35■□□□□ 0.85
SATB1-217ENST00000493952 DBNDD1Q9H9R9 158 aa20.35■□□□□ 0.85
SATB1-217ENST00000493952 CXCL9Q07325 125 aa20.34■□□□□ 0.85
SATB1-217ENST00000493952 CCDC57Q2TAC2 916 aa20.34■□□□□ 0.85
SATB1-217ENST00000493952 RABL6Q3YEC7 729 aaPredicted RBP20.34■□□□□ 0.85
SATB1-217ENST00000493952 FRAT1Q92837 279 aaPredicted RBP20.34■□□□□ 0.85
SATB1-217ENST00000493952 TNNQ9UQP3 1299 aa20.34■□□□□ 0.85
SATB1-217ENST00000493952 IQCA1LA6NCM1 817 aa20.33■□□□□ 0.85
SATB1-217ENST00000493952 TRIM27P14373 513 aa20.33■□□□□ 0.85
SATB1-217ENST00000493952 ATP2B4P23634 1241 aa20.33■□□□□ 0.85
SATB1-217ENST00000493952 DOK7Q18PE1 504 aa20.33■□□□□ 0.85
SATB1-217ENST00000493952 ANKRD44Q8N8A2 993 aa20.33■□□□□ 0.85
SATB1-217ENST00000493952 ZC3H12CQ9C0D7 883 aaKnown RBP20.33■□□□□ 0.85
SATB1-217ENST00000493952 IPO8O15397 1037 aaKnown RBP20.32■□□□□ 0.84
SATB1-217ENST00000493952 ECE2O60344 883 aa20.32■□□□□ 0.84
SATB1-217ENST00000493952 CIAPIN1Q6FI81 312 aa20.32■□□□□ 0.84
SATB1-217ENST00000493952 ATF7IPQ6VMQ6 1270 aa20.32■□□□□ 0.84
SATB1-217ENST00000493952 TAF1DQ9H5J8 278 aaPredicted RBP20.32■□□□□ 0.84
SATB1-217ENST00000493952 HACL1Q9UJ83 578 aa20.32■□□□□ 0.84
SATB1-217ENST00000493952 MED23Q9ULK4 1368 aa20.32■□□□□ 0.84
SATB1-217ENST00000493952 RAD17O75943 681 aa20.31■□□□□ 0.84
SATB1-217ENST00000493952 SCNN1DP51172 638 aa20.31■□□□□ 0.84
SATB1-217ENST00000493952 CHRNDQ07001 517 aa20.31■□□□□ 0.84
SATB1-217ENST00000493952 TAF7LQ5H9L4 462 aa20.31■□□□□ 0.84
SATB1-217ENST00000493952 INTS3Q68E01 1043 aaKnown RBP20.31■□□□□ 0.84
SATB1-217ENST00000493952 ANKRD2Q9GZV1 360 aa20.31■□□□□ 0.84
SATB1-217ENST00000493952 POTEIP0CG38 1075 aa20.3■□□□□ 0.84
SATB1-217ENST00000493952 POTEJP0CG39 1038 aa20.3■□□□□ 0.84
SATB1-217ENST00000493952 SMC1BQ8NDV3 1235 aa20.3■□□□□ 0.84
SATB1-217ENST00000493952 UBTFL1P0CB47 393 aaPredicted RBP20.29■□□□□ 0.84
SATB1-217ENST00000493952 EPHX2P34913 555 aa20.29■□□□□ 0.84
SATB1-217ENST00000493952 FSTL1Q12841 308 aa20.29■□□□□ 0.84
SATB1-217ENST00000493952 ZKSCAN2Q63HK3 967 aa20.29■□□□□ 0.84
SATB1-217ENST00000493952 LDHAL6AQ6ZMR3 332 aa20.29■□□□□ 0.84
SATB1-217ENST00000493952 CLUAP1Q96AJ1 413 aa20.29■□□□□ 0.84
SATB1-217ENST00000493952 MEIS3Q99687 375 aa20.29■□□□□ 0.84
SATB1-217ENST00000493952 KCNQ5Q9NR82 932 aa20.29■□□□□ 0.84
SATB1-217ENST00000493952 CNNM1Q9NRU3 951 aa20.29■□□□□ 0.84
SATB1-217ENST00000493952 LEMD3Q9Y2U8 911 aa20.29■□□□□ 0.84
SATB1-217ENST00000493952 MYH13Q9UKX3 1938 aa20.29■□□□□ 0.84
SATB1-217ENST00000493952 ZNF804BA4D1E1 1349 aa20.28■□□□□ 0.84
SATB1-217ENST00000493952 TAF5LO75529 589 aa20.28■□□□□ 0.84
SATB1-217ENST00000493952 LMOD1P29536 600 aaPredicted RBP20.28■□□□□ 0.84
SATB1-217ENST00000493952 TNIP1Q15025 636 aa20.28■□□□□ 0.84
SATB1-217ENST00000493952 HELBQ8NG08 1087 aaPredicted RBP20.28■□□□□ 0.84
SATB1-217ENST00000493952 POLR2AP24928 1970 aaKnown RBP20.28■□□□□ 0.84
SATB1-217ENST00000493952 G3V3G9 751 aa20.27■□□□□ 0.84
SATB1-217ENST00000493952 PSMD14O00487 310 aa20.27■□□□□ 0.84
SATB1-217ENST00000493952 HSPA6P17066 643 aa20.27■□□□□ 0.84
SATB1-217ENST00000493952 KLRK1P26718 216 aa20.27■□□□□ 0.84
SATB1-217ENST00000493952 GMPSP49915 693 aaPredicted RBP20.27■□□□□ 0.84
SATB1-217ENST00000493952 DCAF8Q5TAQ9 597 aa20.27■□□□□ 0.84
SATB1-217ENST00000493952 TXNRD3Q86VQ6 643 aa20.27■□□□□ 0.84
SATB1-217ENST00000493952 PUS3Q9BZE2 481 aaKnown RBP20.27■□□□□ 0.84
SATB1-217ENST00000493952 GPRC5DQ9NZD1 345 aa20.27■□□□□ 0.84
SATB1-217ENST00000493952 SNAP23O00161 211 aa20.26■□□□□ 0.83
SATB1-217ENST00000493952 EPS15P42566 896 aa20.26■□□□□ 0.83
SATB1-217ENST00000493952 EAPPQ56P03 285 aaPredicted RBP20.26■□□□□ 0.83
SATB1-217ENST00000493952 LRRFIP2Q9Y608 721 aaKnown RBP20.26■□□□□ 0.83
SATB1-217ENST00000493952 TRPM7Q96QT4 1865 aa20.25■□□□□ 0.83
SATB1-217ENST00000493952 KCNJ4P48050 445 aa20.25■□□□□ 0.83
SATB1-217ENST00000493952 KLHDC4Q8TBB5 520 aa20.25■□□□□ 0.83
SATB1-217ENST00000493952 ZBTB12Q9Y330 459 aaPredicted RBP20.25■□□□□ 0.83
SATB1-217ENST00000493952 IRS2Q9Y4H2 1338 aa20.25■□□□□ 0.83
SATB1-217ENST00000493952 ARAP2Q8WZ64 1704 aa20.24■□□□□ 0.83
SATB1-217ENST00000493952 CHADLQ6NUI6 762 aa20.24■□□□□ 0.83
SATB1-217ENST00000493952 PNMA8AQ86V59 439 aaPredicted RBP20.24■□□□□ 0.83
SATB1-217ENST00000493952 LDHDQ86WU2 507 aa20.24■□□□□ 0.83
SATB1-217ENST00000493952 TMEM57Q8N5G2 664 aa20.24■□□□□ 0.83
SATB1-217ENST00000493952 SHTN1A0MZ66 631 aa20.23■□□□□ 0.83
SATB1-217ENST00000493952 PLIN1O60240 522 aa20.23■□□□□ 0.83
SATB1-217ENST00000493952 RFX5P48382 616 aaPredicted RBP20.23■□□□□ 0.83
SATB1-217ENST00000493952 LRRC24Q50LG9 513 aa20.23■□□□□ 0.83
SATB1-217ENST00000493952 PODNQ7Z5L7 613 aa20.23■□□□□ 0.83
SATB1-217ENST00000493952 RIPOR2Q9Y4F9 1068 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms