RNA–Protein interactions for RNA: ENST00000493619.1

RTN4IP1-202, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 3

Gene RTN4IP1, Length 208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-202ENST00000493619 TNIP1Q15025 636 aa7.48□□□□□ -1.21
RTN4IP1-202ENST00000493619 DDX46Q7L014 1031 aaKnown RBP7.48□□□□□ -1.21
RTN4IP1-202ENST00000493619 DDX60Q8IY21 1712 aaKnown RBP7.48□□□□□ -1.21
RTN4IP1-202ENST00000493619 PLBD2Q8NHP8 589 aa7.48□□□□□ -1.21
RTN4IP1-202ENST00000493619 HHIPL1Q96JK4 782 aa7.48□□□□□ -1.21
RTN4IP1-202ENST00000493619 RTFDC1Q9BY42 306 aaPredicted RBP7.48□□□□□ -1.21
RTN4IP1-202ENST00000493619 IFT57Q9NWB7 429 aa7.48□□□□□ -1.21
RTN4IP1-202ENST00000493619 ATP6V0A2Q9Y487 856 aa7.48□□□□□ -1.21
RTN4IP1-202ENST00000493619 CACNA1SQ13698 1873 aa7.47□□□□□ -1.21
RTN4IP1-202ENST00000493619 ZNF609O15014 1411 aa7.47□□□□□ -1.21
RTN4IP1-202ENST00000493619 SNED1Q8TER0 1413 aa7.47□□□□□ -1.21
RTN4IP1-202ENST00000493619 PPEF1O14829 653 aaPredicted RBP7.47□□□□□ -1.21
RTN4IP1-202ENST00000493619 NTSR2O95665 410 aa7.47□□□□□ -1.21
RTN4IP1-202ENST00000493619 ECE1P42892 770 aa7.47□□□□□ -1.21
RTN4IP1-202ENST00000493619 TCIRG1Q13488 830 aa7.47□□□□□ -1.21
RTN4IP1-202ENST00000493619 CCDC27Q2M243 656 aa7.47□□□□□ -1.21
RTN4IP1-202ENST00000493619 SP8Q8IXZ3 490 aa7.47□□□□□ -1.21
RTN4IP1-202ENST00000493619 NIM1KQ8IY84 436 aa7.47□□□□□ -1.21
RTN4IP1-202ENST00000493619 EYA3Q99504 573 aa7.47□□□□□ -1.21
RTN4IP1-202ENST00000493619 CACNA1FO60840 1977 aa7.47□□□□□ -1.21
RTN4IP1-202ENST00000493619 LAMB2P55268 1798 aa7.46□□□□□ -1.21
RTN4IP1-202ENST00000493619 TMEM88BA6NKF7 163 aa7.46□□□□□ -1.22
RTN4IP1-202ENST00000493619 SEMA3EO15041 775 aa7.46□□□□□ -1.22
RTN4IP1-202ENST00000493619 RPS12P25398 132 aaKnown RBP7.46□□□□□ -1.22
RTN4IP1-202ENST00000493619 MAP2K1Q02750 393 aaPredicted RBP7.46□□□□□ -1.22
RTN4IP1-202ENST00000493619 ANKRD13DQ6ZTN6 518 aa7.46□□□□□ -1.22
RTN4IP1-202ENST00000493619 TAF1DQ9H5J8 278 aaPredicted RBP7.46□□□□□ -1.22
RTN4IP1-202ENST00000493619 WWC3Q9ULE0 1092 aa7.46□□□□□ -1.22
RTN4IP1-202ENST00000493619 RRP7AQ9Y3A4 280 aaKnown RBP7.46□□□□□ -1.22
RTN4IP1-202ENST00000493619 IL16Q14005 1332 aa7.46□□□□□ -1.22
RTN4IP1-202ENST00000493619 ADAMTSL1Q8N6G6 1762 aa7.46□□□□□ -1.22
RTN4IP1-202ENST00000493619 LRRC37AA6NMS7 1700 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 KCNQ3O43525 872 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 SLC34A2O95436 690 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 EPHX2P34913 555 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 LSM11P83369 360 aaKnown RBP eCLIP7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 GRAPQ13588 217 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 DCTN1Q14203 1278 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 HDGFL1Q5TGJ6 251 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 CCDC30Q5VVM6 783 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 SYNE4Q8N205 404 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 LARGE2Q8N3Y3 721 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 CCDC191Q8NCU4 936 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 GRAPLQ8TC17 118 aaPredicted RBP7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 AIDAQ96BJ3 306 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 PRKRIP1Q9H875 184 aaPredicted RBP7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 PRDM10Q9NQV6 1147 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 ADARB2Q9NS39 739 aaKnown RBP7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 ZNRF3Q9ULT6 936 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 PASKQ96RG2 1323 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 CNTNAP1P78357 1384 aa7.45□□□□□ -1.22
RTN4IP1-202ENST00000493619 MYL6BP14649 208 aa7.44□□□□□ -1.22
RTN4IP1-202ENST00000493619 KIAA2012Q0VF49 1180 aa7.44□□□□□ -1.22
RTN4IP1-202ENST00000493619 NEXNQ0ZGT2 675 aa7.44□□□□□ -1.22
RTN4IP1-202ENST00000493619 SF3B3Q15393 1217 aaKnown RBP7.44□□□□□ -1.22
RTN4IP1-202ENST00000493619 HLFQ16534 295 aa7.44□□□□□ -1.22
RTN4IP1-202ENST00000493619 SUSD4Q5VX71 490 aa7.44□□□□□ -1.22
RTN4IP1-202ENST00000493619 DPP8Q6V1X1 898 aaPredicted RBP7.44□□□□□ -1.22
RTN4IP1-202ENST00000493619 LRP10Q7Z4F1 713 aa7.44□□□□□ -1.22
RTN4IP1-202ENST00000493619 NLRP10Q86W26 655 aa7.44□□□□□ -1.22
RTN4IP1-202ENST00000493619 DPF2Q92785 391 aa7.44□□□□□ -1.22
RTN4IP1-202ENST00000493619 ZBTB3Q9H5J0 574 aa7.44□□□□□ -1.22
RTN4IP1-202ENST00000493619 TRMT112Q9UI30 125 aaKnown RBP7.44□□□□□ -1.22
RTN4IP1-202ENST00000493619 UBN2Q6ZU65 1347 aa7.44□□□□□ -1.22
RTN4IP1-202ENST00000493619 THSD7BQ9C0I4 1608 aa7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 RASSF10A6NK89 507 aa7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 POTECB2RU33 542 aa7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 PPIP5K2O43314 1243 aa7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 DDNO94850 711 aaPredicted RBP7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 NUDT7P0C024 238 aa7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 MAP2K2P36507 400 aa7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 PBX2P40425 430 aa7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 PDIA6Q15084 440 aa7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 CCDC152Q4G0S7 254 aa7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 COPS6Q7L5N1 327 aa7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 MPNDQ8N594 471 aa7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 ZBTB38Q8NAP3 1195 aaPredicted RBP7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 BEGAINQ9BUH8 593 aa7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 STK31Q9BXU1 1019 aa7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 RTL9Q8NET4 1388 aa7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 ABCC12Q96J65 1359 aa7.43□□□□□ -1.22
RTN4IP1-202ENST00000493619 TESPA1A2RU30 521 aaPredicted RBP7.42□□□□□ -1.22
RTN4IP1-202ENST00000493619 H7C1D1 291 aa7.42□□□□□ -1.22
RTN4IP1-202ENST00000493619 ZNF853P0CG23 659 aa7.42□□□□□ -1.22
RTN4IP1-202ENST00000493619 EIF2S2P20042 333 aaKnown RBP7.42□□□□□ -1.22
RTN4IP1-202ENST00000493619 CTCFP49711 727 aaPredicted RBP7.42□□□□□ -1.22
RTN4IP1-202ENST00000493619 CNGB1Q14028 1251 aaPredicted RBP7.42□□□□□ -1.22
RTN4IP1-202ENST00000493619 E2F4Q16254 413 aa7.42□□□□□ -1.22
RTN4IP1-202ENST00000493619 TMC2Q8TDI7 906 aa7.42□□□□□ -1.22
RTN4IP1-202ENST00000493619 CDC5LQ99459 802 aaKnown RBP7.42□□□□□ -1.22
RTN4IP1-202ENST00000493619 ISCA1Q9BUE6 129 aa7.42□□□□□ -1.22
RTN4IP1-202ENST00000493619 ZNF277Q9NRM2 450 aaPredicted RBP7.42□□□□□ -1.22
RTN4IP1-202ENST00000493619 PGAP2Q9UHJ9 254 aa7.42□□□□□ -1.22
RTN4IP1-202ENST00000493619 PCDHGA4Q9Y5G9 962 aa7.42□□□□□ -1.22
RTN4IP1-202ENST00000493619 MYO3BQ8WXR4 1341 aa7.42□□□□□ -1.22
RTN4IP1-202ENST00000493619 TRPM7Q96QT4 1865 aa7.42□□□□□ -1.22
RTN4IP1-202ENST00000493619 PRAMEF22A3QJZ6 481 aa7.41□□□□□ -1.22
RTN4IP1-202ENST00000493619 PDE8AO60658 829 aa7.41□□□□□ -1.22
RTN4IP1-202ENST00000493619 PCCAP05165 728 aaPredicted RBP7.41□□□□□ -1.22
RTN4IP1-202ENST00000493619 PRELPP51888 382 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms