RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 ZC3H12CQ9C0D7 883 aaKnown RBP22.76■■□□□ 1.23
GTF3C2-212ENST00000493511 ANKRD18BA2A2Z9 1011 aa22.75■■□□□ 1.23
GTF3C2-212ENST00000493511 BRPF1P55201 1214 aaPredicted RBP22.75■■□□□ 1.23
GTF3C2-212ENST00000493511 FOXO4P98177 505 aa22.75■■□□□ 1.23
GTF3C2-212ENST00000493511 CXCL9Q07325 125 aa22.75■■□□□ 1.23
GTF3C2-212ENST00000493511 IFIT5Q13325 482 aaKnown RBP22.75■■□□□ 1.23
GTF3C2-212ENST00000493511 TNIP1Q15025 636 aa22.75■■□□□ 1.23
GTF3C2-212ENST00000493511 MPHOSPH8Q99549 860 aa22.75■■□□□ 1.23
GTF3C2-212ENST00000493511 RIMBP2O15034 1052 aa22.74■■□□□ 1.23
GTF3C2-212ENST00000493511 EPHX2P34913 555 aa22.74■■□□□ 1.23
GTF3C2-212ENST00000493511 RARSP54136 660 aaKnown RBP22.74■■□□□ 1.23
GTF3C2-212ENST00000493511 CIAPIN1Q6FI81 312 aa22.74■■□□□ 1.23
GTF3C2-212ENST00000493511 PNMA8AQ86V59 439 aaPredicted RBP22.74■■□□□ 1.23
GTF3C2-212ENST00000493511 MINPP1Q9UNW1 487 aa22.74■■□□□ 1.23
GTF3C2-212ENST00000493511 CHMP3Q9Y3E7 222 aa22.74■■□□□ 1.23
GTF3C2-212ENST00000493511 ATP2B4P23634 1241 aa22.73■■□□□ 1.23
GTF3C2-212ENST00000493511 APLP1P51693 650 aa22.73■■□□□ 1.23
GTF3C2-212ENST00000493511 LMBR1LQ6UX01 489 aa22.73■■□□□ 1.23
GTF3C2-212ENST00000493511 UTYO14607 1347 aa22.73■■□□□ 1.23
GTF3C2-212ENST00000493511 G3V3G9 751 aa22.72■■□□□ 1.23
GTF3C2-212ENST00000493511 RAD17O75943 681 aa22.72■■□□□ 1.23
GTF3C2-212ENST00000493511 DCAF8Q5TAQ9 597 aa22.72■■□□□ 1.23
GTF3C2-212ENST00000493511 CHADLQ6NUI6 762 aa22.72■■□□□ 1.23
GTF3C2-212ENST00000493511 LDHDQ86WU2 507 aa22.72■■□□□ 1.23
GTF3C2-212ENST00000493511 API5Q9BZZ5 524 aaKnown RBP22.72■■□□□ 1.23
GTF3C2-212ENST00000493511 NOB1Q9ULX3 412 aaKnown RBP22.72■■□□□ 1.23
GTF3C2-212ENST00000493511 KIF16BQ96L93 1317 aa22.72■■□□□ 1.23
GTF3C2-212ENST00000493511 SPEF2Q9C093 1822 aa22.71■■□□□ 1.23
GTF3C2-212ENST00000493511 NBPF7P0C2Y1 421 aaPredicted RBP22.71■■□□□ 1.23
GTF3C2-212ENST00000493511 SCNN1DP51172 638 aa22.71■■□□□ 1.23
GTF3C2-212ENST00000493511 CCDC57Q2TAC2 916 aa22.71■■□□□ 1.23
GTF3C2-212ENST00000493511 EAPPQ56P03 285 aaPredicted RBP22.71■■□□□ 1.23
GTF3C2-212ENST00000493511 GPR101Q96P66 508 aaPredicted RBP22.71■■□□□ 1.23
GTF3C2-212ENST00000493511 ANKRD2Q9GZV1 360 aa22.71■■□□□ 1.23
GTF3C2-212ENST00000493511 DBNDD1Q9H9R9 158 aa22.71■■□□□ 1.23
GTF3C2-212ENST00000493511 ZBED9Q6R2W3 1325 aa22.71■■□□□ 1.23
GTF3C2-212ENST00000493511 YDJCA8MPS7 323 aa22.7■■□□□ 1.22
GTF3C2-212ENST00000493511 ECE2O60344 883 aa22.7■■□□□ 1.22
GTF3C2-212ENST00000493511 CCT4P50991 539 aaKnown RBP22.7■■□□□ 1.22
GTF3C2-212ENST00000493511 EPHA10Q5JZY3 1008 aa22.7■■□□□ 1.22
GTF3C2-212ENST00000493511 POTEIP0CG38 1075 aa22.69■■□□□ 1.22
GTF3C2-212ENST00000493511 POTEJP0CG39 1038 aa22.69■■□□□ 1.22
GTF3C2-212ENST00000493511 DOK7Q18PE1 504 aa22.69■■□□□ 1.22
GTF3C2-212ENST00000493511 TAF7LQ5H9L4 462 aa22.69■■□□□ 1.22
GTF3C2-212ENST00000493511 SUCLG2Q96I99 432 aa22.69■■□□□ 1.22
GTF3C2-212ENST00000493511 GPRC5DQ9NZD1 345 aa22.69■■□□□ 1.22
GTF3C2-212ENST00000493511 LEMD3Q9Y2U8 911 aa22.69■■□□□ 1.22
GTF3C2-212ENST00000493511 GMPSP49915 693 aaPredicted RBP22.68■■□□□ 1.22
GTF3C2-212ENST00000493511 ARHGAP45Q92619 1136 aa22.68■■□□□ 1.22
GTF3C2-212ENST00000493511 MED23Q9ULK4 1368 aa22.67■■□□□ 1.22
GTF3C2-212ENST00000493511 EPS15P42566 896 aa22.67■■□□□ 1.22
GTF3C2-212ENST00000493511 USP44Q9H0E7 712 aa22.67■■□□□ 1.22
GTF3C2-212ENST00000493511 CLEC11AQ9Y240 323 aa22.67■■□□□ 1.22
GTF3C2-212ENST00000493511 PSMD14O00487 310 aa22.66■■□□□ 1.22
GTF3C2-212ENST00000493511 IPO8O15397 1037 aaKnown RBP22.66■■□□□ 1.22
GTF3C2-212ENST00000493511 USP50Q70EL3 339 aaPredicted RBP22.66■■□□□ 1.22
GTF3C2-212ENST00000493511 KAZALD1Q96I82 304 aa22.66■■□□□ 1.22
GTF3C2-212ENST00000493511 BICC1Q9H694 974 aaKnown RBP22.66■■□□□ 1.22
GTF3C2-212ENST00000493511 ADARB2Q9NS39 739 aaKnown RBP22.66■■□□□ 1.22
GTF3C2-212ENST00000493511 KCNJ4P48050 445 aa22.65■■□□□ 1.22
GTF3C2-212ENST00000493511 CHRNDQ07001 517 aa22.65■■□□□ 1.22
GTF3C2-212ENST00000493511 RABL6Q3YEC7 729 aaPredicted RBP22.65■■□□□ 1.22
GTF3C2-212ENST00000493511 LDHAL6AQ6ZMR3 332 aa22.65■■□□□ 1.22
GTF3C2-212ENST00000493511 ZNF804BA4D1E1 1349 aa22.64■■□□□ 1.22
GTF3C2-212ENST00000493511 RPS12P25398 132 aaKnown RBP22.64■■□□□ 1.21
GTF3C2-212ENST00000493511 PODNQ7Z5L7 613 aa22.64■■□□□ 1.21
GTF3C2-212ENST00000493511 DPF2Q92785 391 aa22.64■■□□□ 1.21
GTF3C2-212ENST00000493511 CNNM1Q9NRU3 951 aa22.63■■□□□ 1.21
GTF3C2-212ENST00000493511 HDAC5Q9UQL6 1122 aa22.63■■□□□ 1.21
GTF3C2-212ENST00000493511 WTIPA6NIX2 430 aaPredicted RBP22.62■■□□□ 1.21
GTF3C2-212ENST00000493511 H7C1D1 291 aa22.62■■□□□ 1.21
GTF3C2-212ENST00000493511 ZNF594Q96JF6 807 aaPredicted RBP22.62■■□□□ 1.21
GTF3C2-212ENST00000493511 KCNQ5Q9NR82 932 aa22.62■■□□□ 1.21
GTF3C2-212ENST00000493511 CNOT7Q9UIV1 285 aaKnown RBP22.62■■□□□ 1.21
GTF3C2-212ENST00000493511 ADAMTSL1Q8N6G6 1762 aa22.62■■□□□ 1.21
GTF3C2-212ENST00000493511 VIL1P09327 827 aaKnown RBP22.61■■□□□ 1.21
GTF3C2-212ENST00000493511 UBTFL1P0CB47 393 aaPredicted RBP22.61■■□□□ 1.21
GTF3C2-212ENST00000493511 ANKRD44Q8N8A2 993 aa22.61■■□□□ 1.21
GTF3C2-212ENST00000493511 FRAT1Q92837 279 aaPredicted RBP22.61■■□□□ 1.21
GTF3C2-212ENST00000493511 COA1Q9GZY4 146 aa22.61■■□□□ 1.21
GTF3C2-212ENST00000493511 ZBTB12Q9Y330 459 aaPredicted RBP22.61■■□□□ 1.21
GTF3C2-212ENST00000493511 SCN9AQ15858 1988 aa22.6■■□□□ 1.21
GTF3C2-212ENST00000493511 PCNTO95613 3336 aa22.6■■□□□ 1.21
GTF3C2-212ENST00000493511 BCAR3O75815 825 aa22.6■■□□□ 1.21
GTF3C2-212ENST00000493511 MICALL2Q8IY33 904 aa22.6■■□□□ 1.21
GTF3C2-212ENST00000493511 USP17L3A6NCW0 530 aa22.59■■□□□ 1.21
GTF3C2-212ENST00000493511 USP17L4A6NCW7 530 aa22.59■■□□□ 1.21
GTF3C2-212ENST00000493511 TAF5LO75529 589 aa22.59■■□□□ 1.21
GTF3C2-212ENST00000493511 MAP1SQ66K74 1059 aaPredicted RBP22.59■■□□□ 1.21
GTF3C2-212ENST00000493511 INTS3Q68E01 1043 aaKnown RBP22.59■■□□□ 1.21
GTF3C2-212ENST00000493511 ATF7IPQ6VMQ6 1270 aa22.59■■□□□ 1.21
GTF3C2-212ENST00000493511 USP17L1Q7RTZ2 530 aa22.59■■□□□ 1.21
GTF3C2-212ENST00000493511 CNTROBQ8N137 903 aa22.59■■□□□ 1.21
GTF3C2-212ENST00000493511 HELBQ8NG08 1087 aaPredicted RBP22.59■■□□□ 1.21
GTF3C2-212ENST00000493511 TRIM27P14373 513 aa22.58■■□□□ 1.21
GTF3C2-212ENST00000493511 AGBL3Q8NEM8 1001 aa22.58■■□□□ 1.21
GTF3C2-212ENST00000493511 PASKQ96RG2 1323 aa22.57■■□□□ 1.2
GTF3C2-212ENST00000493511 ITGBL1O95965 494 aaPredicted RBP22.57■■□□□ 1.2
GTF3C2-212ENST00000493511 RSBN1LQ6PCB5 846 aaPredicted RBP22.57■■□□□ 1.2
GTF3C2-212ENST00000493511 C15orf52Q6ZUT6 534 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms