RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 IRS4O14654 1257 aaPredicted RBP14.29□□□□□ -0.12
SNRNP200-207ENST00000493271 RIMBP2O15034 1052 aa14.29□□□□□ -0.12
SNRNP200-207ENST00000493271 FKBP1BP68106 108 aa14.29□□□□□ -0.12
SNRNP200-207ENST00000493271 DCAF8Q5TAQ9 597 aa14.29□□□□□ -0.12
SNRNP200-207ENST00000493271 AGBL3Q8NEM8 1001 aa14.29□□□□□ -0.12
SNRNP200-207ENST00000493271 RUNDC1Q96C34 613 aa14.29□□□□□ -0.12
SNRNP200-207ENST00000493271 CHMP4AQ9BY43 222 aa14.29□□□□□ -0.12
SNRNP200-207ENST00000493271 RTL9Q8NET4 1388 aa14.29□□□□□ -0.12
SNRNP200-207ENST00000493271 CASP8AP2Q9UKL3 1982 aa14.29□□□□□ -0.12
SNRNP200-207ENST00000493271 SLC10A3P09131 477 aa14.28□□□□□ -0.12
SNRNP200-207ENST00000493271 TAF1P21675 1872 aa14.28□□□□□ -0.12
SNRNP200-207ENST00000493271 KIF23Q02241 960 aaPredicted RBP14.28□□□□□ -0.12
SNRNP200-207ENST00000493271 ZBTB38Q8NAP3 1195 aaPredicted RBP14.28□□□□□ -0.12
SNRNP200-207ENST00000493271 MYBBP1AQ9BQG0 1328 aaKnown RBP14.27□□□□□ -0.12
SNRNP200-207ENST00000493271 PITPNM2Q9BZ72 1349 aa14.27□□□□□ -0.12
SNRNP200-207ENST00000493271 ADM5C9JUS6 153 aa14.27□□□□□ -0.13
SNRNP200-207ENST00000493271 ATP5J2-PTCD1G3V325 749 aa14.27□□□□□ -0.13
SNRNP200-207ENST00000493271 EGFRP00533 1210 aa14.27□□□□□ -0.13
SNRNP200-207ENST00000493271 ZNF280AP59817 542 aaPredicted RBP14.27□□□□□ -0.13
SNRNP200-207ENST00000493271 GOLGA2Q08379 1002 aa14.27□□□□□ -0.13
SNRNP200-207ENST00000493271 NEUROD2Q15784 382 aa14.27□□□□□ -0.13
SNRNP200-207ENST00000493271 DOK7Q18PE1 504 aa14.27□□□□□ -0.13
SNRNP200-207ENST00000493271 KRT24Q2M2I5 525 aa14.27□□□□□ -0.13
SNRNP200-207ENST00000493271 CCDC152Q4G0S7 254 aa14.27□□□□□ -0.13
SNRNP200-207ENST00000493271 ZIC5Q96T25 663 aa14.27□□□□□ -0.13
SNRNP200-207ENST00000493271 RNF186Q9NXI6 227 aa14.27□□□□□ -0.13
SNRNP200-207ENST00000493271 GGA3Q9NZ52 723 aa14.27□□□□□ -0.13
SNRNP200-207ENST00000493271 GGA1Q9UJY5 639 aa14.27□□□□□ -0.13
SNRNP200-207ENST00000493271 TRIM35Q9UPQ4 493 aa14.27□□□□□ -0.13
SNRNP200-207ENST00000493271 LAS1LQ9Y4W2 734 aaKnown RBP14.27□□□□□ -0.13
SNRNP200-207ENST00000493271 UFL1O94874 794 aa14.26□□□□□ -0.13
SNRNP200-207ENST00000493271 WDR43Q15061 677 aaKnown RBP eCLIP14.26□□□□□ -0.13
SNRNP200-207ENST00000493271 RBM26Q5T8P6 1007 aaKnown RBP14.26□□□□□ -0.13
SNRNP200-207ENST00000493271 RIC3Q7Z5B4 369 aa14.26□□□□□ -0.13
SNRNP200-207ENST00000493271 ANKIB1Q9P2G1 1089 aa14.26□□□□□ -0.13
SNRNP200-207ENST00000493271 CALD1Q05682 793 aaKnown RBP14.25□□□□□ -0.13
SNRNP200-207ENST00000493271 DUSP27Q5VZP5 1158 aa14.25□□□□□ -0.13
SNRNP200-207ENST00000493271 RSBN1LQ6PCB5 846 aaPredicted RBP14.25□□□□□ -0.13
SNRNP200-207ENST00000493271 PODNQ7Z5L7 613 aa14.25□□□□□ -0.13
SNRNP200-207ENST00000493271 CCDC191Q8NCU4 936 aa14.25□□□□□ -0.13
SNRNP200-207ENST00000493271 CDCA5Q96FF9 252 aa14.25□□□□□ -0.13
SNRNP200-207ENST00000493271 XDHP47989 1333 aa14.24□□□□□ -0.13
SNRNP200-207ENST00000493271 PDE8AO60658 829 aa14.24□□□□□ -0.13
SNRNP200-207ENST00000493271 TRPA1O75762 1119 aa14.24□□□□□ -0.13
SNRNP200-207ENST00000493271 PCCAP05165 728 aaPredicted RBP14.24□□□□□ -0.13
SNRNP200-207ENST00000493271 MMP14P50281 582 aa14.24□□□□□ -0.13
SNRNP200-207ENST00000493271 PKN2Q16513 984 aaKnown RBP14.24□□□□□ -0.13
SNRNP200-207ENST00000493271 CTU1Q7Z7A3 348 aaKnown RBP14.24□□□□□ -0.13
SNRNP200-207ENST00000493271 CCDC146Q8IYE0 955 aa14.24□□□□□ -0.13
SNRNP200-207ENST00000493271 CSRNP1Q96S65 589 aa14.24□□□□□ -0.13
SNRNP200-207ENST00000493271 KCNQ5Q9NR82 932 aa14.24□□□□□ -0.13
SNRNP200-207ENST00000493271 PAPPA2Q9BXP8 1791 aa14.24□□□□□ -0.13
SNRNP200-207ENST00000493271 AKAP11Q9UKA4 1901 aa14.23□□□□□ -0.13
SNRNP200-207ENST00000493271 DDX58O95786 925 aaKnown RBP14.23□□□□□ -0.13
SNRNP200-207ENST00000493271 USP17L8P0C7I0 530 aa14.23□□□□□ -0.13
SNRNP200-207ENST00000493271 ATP2B4P23634 1241 aa14.23□□□□□ -0.13
SNRNP200-207ENST00000493271 SCARF1Q14162 830 aa14.23□□□□□ -0.13
SNRNP200-207ENST00000493271 RTL5Q5HYW3 569 aaPredicted RBP14.23□□□□□ -0.13
SNRNP200-207ENST00000493271 ANGEL2Q5VTE6 544 aaKnown RBP14.23□□□□□ -0.13
SNRNP200-207ENST00000493271 DLK2Q6UY11 383 aa14.23□□□□□ -0.13
SNRNP200-207ENST00000493271 RASAL3Q86YV0 1011 aa14.22□□□□□ -0.13
SNRNP200-207ENST00000493271 ANKRD18AQ8IVF6 992 aa14.22□□□□□ -0.13
SNRNP200-207ENST00000493271 CDC5LQ99459 802 aaKnown RBP14.22□□□□□ -0.13
SNRNP200-207ENST00000493271 MYOZ2Q9NPC6 264 aa14.22□□□□□ -0.13
SNRNP200-207ENST00000493271 MBIPQ9NS73 344 aa14.22□□□□□ -0.13
SNRNP200-207ENST00000493271 CWC25Q9NXE8 425 aaPredicted RBP14.22□□□□□ -0.13
SNRNP200-207ENST00000493271 PSME4Q14997 1843 aa14.22□□□□□ -0.13
SNRNP200-207ENST00000493271 TNRC18O15417 2968 aaPredicted RBP14.22□□□□□ -0.13
SNRNP200-207ENST00000493271 POLR2AP24928 1970 aaKnown RBP14.22□□□□□ -0.13
SNRNP200-207ENST00000493271 SCN9AQ15858 1988 aa14.22□□□□□ -0.13
SNRNP200-207ENST00000493271 MYO3BQ8WXR4 1341 aa14.21□□□□□ -0.13
SNRNP200-207ENST00000493271 USP17L3A6NCW0 530 aa14.21□□□□□ -0.13
SNRNP200-207ENST00000493271 USP17L4A6NCW7 530 aa14.21□□□□□ -0.13
SNRNP200-207ENST00000493271 GNAI1P63096 354 aa14.21□□□□□ -0.13
SNRNP200-207ENST00000493271 NOM1Q5C9Z4 860 aaKnown RBP14.21□□□□□ -0.13
SNRNP200-207ENST00000493271 USP17L1Q7RTZ2 530 aa14.21□□□□□ -0.13
SNRNP200-207ENST00000493271 ZNF428Q96B54 188 aa14.21□□□□□ -0.13
SNRNP200-207ENST00000493271 GMLQ99445 158 aa14.21□□□□□ -0.13
SNRNP200-207ENST00000493271 SEC31BQ9NQW1 1179 aa14.21□□□□□ -0.13
SNRNP200-207ENST00000493271 IFT57Q9NWB7 429 aa14.21□□□□□ -0.13
SNRNP200-207ENST00000493271 MED23Q9ULK4 1368 aa14.21□□□□□ -0.14
SNRNP200-207ENST00000493271 COL4A1P02462 1669 aa14.2□□□□□ -0.14
SNRNP200-207ENST00000493271 ZNF853P0CG23 659 aa14.2□□□□□ -0.14
SNRNP200-207ENST00000493271 OGFOD1Q8N543 542 aa14.2□□□□□ -0.14
SNRNP200-207ENST00000493271 MYD88Q99836 296 aa14.2□□□□□ -0.14
SNRNP200-207ENST00000493271 NF2P35240 595 aa14.19□□□□□ -0.14
SNRNP200-207ENST00000493271 METTL22Q9BUU2 404 aaPredicted RBP14.19□□□□□ -0.14
SNRNP200-207ENST00000493271 ADAMTS8Q9UP79 889 aa14.19□□□□□ -0.14
SNRNP200-207ENST00000493271 ASTN2O75129 1339 aaPredicted RBP14.18□□□□□ -0.14
SNRNP200-207ENST00000493271 PRPF38BQ5VTL8 546 aaKnown RBP14.18□□□□□ -0.14
SNRNP200-207ENST00000493271 CCDC30Q5VVM6 783 aa14.18□□□□□ -0.14
SNRNP200-207ENST00000493271 PHAXQ9H814 394 aaKnown RBP14.18□□□□□ -0.14
SNRNP200-207ENST00000493271 BSDC1Q9NW68 430 aaPredicted RBP14.18□□□□□ -0.14
SNRNP200-207ENST00000493271 HDAC9Q9UKV0 1011 aa14.18□□□□□ -0.14
SNRNP200-207ENST00000493271 PDE4DIPQ5VU43 2346 aa14.17□□□□□ -0.14
SNRNP200-207ENST00000493271 TM4SF4P48230 202 aa14.17□□□□□ -0.14
SNRNP200-207ENST00000493271 CTSWP56202 376 aa14.17□□□□□ -0.14
SNRNP200-207ENST00000493271 SOX10P56693 466 aa14.17□□□□□ -0.14
SNRNP200-207ENST00000493271 SREBF2Q12772 1141 aa14.17□□□□□ -0.14
SNRNP200-207ENST00000493271 STRIP1Q5VSL9 837 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms