RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ANKRD44Q8N8A2 993 aa16.04■□□□□ 0.16
CLIP2-209ENST00000493166 JDP2Q8WYK2 163 aa16.04■□□□□ 0.16
CLIP2-209ENST00000493166 MEIS3Q99687 375 aa16.04■□□□□ 0.16
CLIP2-209ENST00000493166 VPS33BQ9H267 617 aa16.04■□□□□ 0.16
CLIP2-209ENST00000493166 GPBP1L1Q9HC44 474 aaPredicted RBP16.04■□□□□ 0.16
CLIP2-209ENST00000493166 WDR90Q96KV7 1748 aa16.03■□□□□ 0.16
CLIP2-209ENST00000493166 XDHP47989 1333 aa16.03■□□□□ 0.16
CLIP2-209ENST00000493166 UFL1O94874 794 aa16.03■□□□□ 0.16
CLIP2-209ENST00000493166 GNAI3P08754 354 aa16.03■□□□□ 0.16
CLIP2-209ENST00000493166 NIM1KQ8IY84 436 aa16.03■□□□□ 0.16
CLIP2-209ENST00000493166 PODXL2Q9NZ53 605 aa16.03■□□□□ 0.16
CLIP2-209ENST00000493166 GGA1Q9UJY5 639 aa16.03■□□□□ 0.16
CLIP2-209ENST00000493166 MINPP1Q9UNW1 487 aa16.03■□□□□ 0.16
CLIP2-209ENST00000493166 PSME4Q14997 1843 aa16.03■□□□□ 0.16
CLIP2-209ENST00000493166 GLTPD2A6NH11 291 aa16.02■□□□□ 0.16
CLIP2-209ENST00000493166 DPY19L2Q6NUT2 758 aa16.02■□□□□ 0.16
CLIP2-209ENST00000493166 TBC1D16Q8TBP0 767 aa16.02■□□□□ 0.16
CLIP2-209ENST00000493166 ZNF594Q96JF6 807 aaPredicted RBP16.02■□□□□ 0.16
CLIP2-209ENST00000493166 EYA3Q99504 573 aa16.02■□□□□ 0.16
CLIP2-209ENST00000493166 POLLQ9UGP5 575 aa16.02■□□□□ 0.16
CLIP2-209ENST00000493166 LRRFIP2Q9Y608 721 aaKnown RBP16.02■□□□□ 0.16
CLIP2-209ENST00000493166 SCN4AP35499 1836 aa16.02■□□□□ 0.16
CLIP2-209ENST00000493166 MS4A1P11836 297 aa16.01■□□□□ 0.15
CLIP2-209ENST00000493166 RLBP1P12271 317 aa16.01■□□□□ 0.15
CLIP2-209ENST00000493166 KIAA2012Q0VF49 1180 aa16.01■□□□□ 0.15
CLIP2-209ENST00000493166 WASHC4Q2M389 1173 aa16.01■□□□□ 0.15
CLIP2-209ENST00000493166 LDHAL6AQ6ZMR3 332 aa16.01■□□□□ 0.15
CLIP2-209ENST00000493166 ITPRIPQ8IWB1 547 aa16.01■□□□□ 0.15
CLIP2-209ENST00000493166 CNNM1Q9NRU3 951 aa16.01■□□□□ 0.15
CLIP2-209ENST00000493166 FZD9O00144 591 aa16■□□□□ 0.15
CLIP2-209ENST00000493166 RIMBP2O15034 1052 aa16■□□□□ 0.15
CLIP2-209ENST00000493166 ATP2B4P23634 1241 aa16■□□□□ 0.15
CLIP2-209ENST00000493166 CHRNDQ07001 517 aa16■□□□□ 0.15
CLIP2-209ENST00000493166 GPR101Q96P66 508 aaPredicted RBP16■□□□□ 0.15
CLIP2-209ENST00000493166 ANKRD2Q9GZV1 360 aa16■□□□□ 0.15
CLIP2-209ENST00000493166 SCN9AQ15858 1988 aa16■□□□□ 0.15
CLIP2-209ENST00000493166 ZNF541Q9H0D2 1346 aa15.99■□□□□ 0.15
CLIP2-209ENST00000493166 PLIN1O60240 522 aa15.99■□□□□ 0.15
CLIP2-209ENST00000493166 EIF6P56537 245 aaKnown RBP15.99■□□□□ 0.15
CLIP2-209ENST00000493166 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.99■□□□□ 0.15
CLIP2-209ENST00000493166 PANK1Q8TE04 598 aa15.99■□□□□ 0.15
CLIP2-209ENST00000493166 ZC3H12CQ9C0D7 883 aaKnown RBP15.99■□□□□ 0.15
CLIP2-209ENST00000493166 DDNO94850 711 aaPredicted RBP15.98■□□□□ 0.15
CLIP2-209ENST00000493166 GNAI2P04899 355 aa15.98■□□□□ 0.15
CLIP2-209ENST00000493166 KCNJ4P48050 445 aa15.98■□□□□ 0.15
CLIP2-209ENST00000493166 NMRK2Q9NPI5 230 aa15.98■□□□□ 0.15
CLIP2-209ENST00000493166 ZNRF3Q9ULT6 936 aa15.98■□□□□ 0.15
CLIP2-209ENST00000493166 LEMD3Q9Y2U8 911 aa15.98■□□□□ 0.15
CLIP2-209ENST00000493166 G3V3G9 751 aa15.97■□□□□ 0.15
CLIP2-209ENST00000493166 DCAF8Q5TAQ9 597 aa15.97■□□□□ 0.15
CLIP2-209ENST00000493166 DBNDD1Q9H9R9 158 aa15.97■□□□□ 0.15
CLIP2-209ENST00000493166 MYH13Q9UKX3 1938 aa15.97■□□□□ 0.15
CLIP2-209ENST00000493166 MED23Q9ULK4 1368 aa15.97■□□□□ 0.15
CLIP2-209ENST00000493166 ZNF804BA4D1E1 1349 aa15.96■□□□□ 0.15
CLIP2-209ENST00000493166 TAF5LO75529 589 aa15.96■□□□□ 0.15
CLIP2-209ENST00000493166 DOK7Q18PE1 504 aa15.96■□□□□ 0.15
CLIP2-209ENST00000493166 GPC2Q8N158 579 aa15.96■□□□□ 0.15
CLIP2-209ENST00000493166 HELBQ8NG08 1087 aaPredicted RBP15.96■□□□□ 0.15
CLIP2-209ENST00000493166 KLHDC4Q8TBB5 520 aa15.96■□□□□ 0.15
CLIP2-209ENST00000493166 PUS3Q9BZE2 481 aaKnown RBP15.96■□□□□ 0.15
CLIP2-209ENST00000493166 RRAGCQ9HB90 399 aa15.96■□□□□ 0.15
CLIP2-209ENST00000493166 GJA3Q9Y6H8 435 aa15.96■□□□□ 0.15
CLIP2-209ENST00000493166 ZNF646O15015 1829 aaPredicted RBP15.96■□□□□ 0.14
CLIP2-209ENST00000493166 MROH5Q6ZUA9 1318 aa15.95■□□□□ 0.14
CLIP2-209ENST00000493166 WTIPA6NIX2 430 aaPredicted RBP15.95■□□□□ 0.14
CLIP2-209ENST00000493166 ECE2O60344 883 aa15.95■□□□□ 0.14
CLIP2-209ENST00000493166 RFX5P48382 616 aaPredicted RBP15.95■□□□□ 0.14
CLIP2-209ENST00000493166 YDJCA8MPS7 323 aa15.94■□□□□ 0.14
CLIP2-209ENST00000493166 ZBTB7BO15156 539 aaPredicted RBP15.94■□□□□ 0.14
CLIP2-209ENST00000493166 SRGAP3O43295 1099 aa15.94■□□□□ 0.14
CLIP2-209ENST00000493166 RAD17O75943 681 aa15.94■□□□□ 0.14
CLIP2-209ENST00000493166 VEGFAP15692 232 aaPredicted RBP15.94■□□□□ 0.14
CLIP2-209ENST00000493166 PTPN12Q05209 780 aaKnown RBP15.94■□□□□ 0.14
CLIP2-209ENST00000493166 CXCL9Q07325 125 aa15.94■□□□□ 0.14
CLIP2-209ENST00000493166 MVPQ14764 893 aaKnown RBP15.94■□□□□ 0.14
CLIP2-209ENST00000493166 LRRC24Q50LG9 513 aa15.94■□□□□ 0.14
CLIP2-209ENST00000493166 METTL24Q5JXM2 366 aa15.94■□□□□ 0.14
CLIP2-209ENST00000493166 RIPOR2Q9Y4F9 1068 aa15.94■□□□□ 0.14
CLIP2-209ENST00000493166 KIF3CO14782 793 aa15.93■□□□□ 0.14
CLIP2-209ENST00000493166 MTX1Q13505 466 aa15.93■□□□□ 0.14
CLIP2-209ENST00000493166 PDE3AQ14432 1141 aa15.93■□□□□ 0.14
CLIP2-209ENST00000493166 TNIP1Q15025 636 aa15.93■□□□□ 0.14
CLIP2-209ENST00000493166 CIAPIN1Q6FI81 312 aa15.93■□□□□ 0.14
CLIP2-209ENST00000493166 C16orf71Q8IYS4 520 aaPredicted RBP15.93■□□□□ 0.14
CLIP2-209ENST00000493166 L3MBTL3Q96JM7 780 aaPredicted RBP15.93■□□□□ 0.14
CLIP2-209ENST00000493166 SIL1Q9H173 461 aa15.93■□□□□ 0.14
CLIP2-209ENST00000493166 C1orf115Q9H7X2 142 aa15.93■□□□□ 0.14
CLIP2-209ENST00000493166 COG6Q9Y2V7 657 aa15.93■□□□□ 0.14
CLIP2-209ENST00000493166 ARAP2Q8WZ64 1704 aa15.92■□□□□ 0.14
CLIP2-209ENST00000493166 IQCA1LA6NCM1 817 aa15.92■□□□□ 0.14
CLIP2-209ENST00000493166 SNAP23O00161 211 aa15.92■□□□□ 0.14
CLIP2-209ENST00000493166 EYA2O00167 538 aa15.92■□□□□ 0.14
CLIP2-209ENST00000493166 KLRK1P26718 216 aa15.92■□□□□ 0.14
CLIP2-209ENST00000493166 C1QTNF8P60827 252 aa15.92■□□□□ 0.14
CLIP2-209ENST00000493166 DDX19BQ9UMR2 479 aa15.92■□□□□ 0.14
CLIP2-209ENST00000493166 C20orf194Q5TEA3 1177 aa15.91■□□□□ 0.14
CLIP2-209ENST00000493166 TXNRD3Q86VQ6 643 aa15.91■□□□□ 0.14
CLIP2-209ENST00000493166 FBXO3Q9UK99 471 aa15.91■□□□□ 0.14
CLIP2-209ENST00000493166 PA2G4Q9UQ80 394 aaKnown RBP15.91■□□□□ 0.14
CLIP2-209ENST00000493166 POTECB2RU33 542 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms