RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 C6orf229H3BNL8 230 aa13.42□□□□□ -0.26
CDC42SE1-206ENST00000492796 TOMM70O94826 608 aa13.42□□□□□ -0.26
CDC42SE1-206ENST00000492796 DDNO94850 711 aaPredicted RBP13.42□□□□□ -0.26
CDC42SE1-206ENST00000492796 IFIT5Q13325 482 aaKnown RBP13.42□□□□□ -0.26
CDC42SE1-206ENST00000492796 WASHC4Q2M389 1173 aa13.42□□□□□ -0.26
CDC42SE1-206ENST00000492796 LMBR1LQ6UX01 489 aa13.42□□□□□ -0.26
CDC42SE1-206ENST00000492796 TBC1D16Q8TBP0 767 aa13.42□□□□□ -0.26
CDC42SE1-206ENST00000492796 SUCLG2Q96I99 432 aa13.42□□□□□ -0.26
CDC42SE1-206ENST00000492796 MPHOSPH8Q99549 860 aa13.42□□□□□ -0.26
CDC42SE1-206ENST00000492796 POLLQ9UGP5 575 aa13.42□□□□□ -0.26
CDC42SE1-206ENST00000492796 GGA1Q9UJY5 639 aa13.42□□□□□ -0.26
CDC42SE1-206ENST00000492796 ZNRF3Q9ULT6 936 aa13.42□□□□□ -0.26
CDC42SE1-206ENST00000492796 CHMP3Q9Y3E7 222 aa13.42□□□□□ -0.26
CDC42SE1-206ENST00000492796 BCAR3O75815 825 aa13.41□□□□□ -0.26
CDC42SE1-206ENST00000492796 UFL1O94874 794 aa13.41□□□□□ -0.26
CDC42SE1-206ENST00000492796 ATP2B4P23634 1241 aa13.41□□□□□ -0.26
CDC42SE1-206ENST00000492796 CCDC57Q2TAC2 916 aa13.41□□□□□ -0.26
CDC42SE1-206ENST00000492796 RABL6Q3YEC7 729 aaPredicted RBP13.41□□□□□ -0.26
CDC42SE1-206ENST00000492796 EPHA10Q5JZY3 1008 aa13.41□□□□□ -0.26
CDC42SE1-206ENST00000492796 KAZALD1Q96I82 304 aa13.41□□□□□ -0.26
CDC42SE1-206ENST00000492796 USP44Q9H0E7 712 aa13.41□□□□□ -0.26
CDC42SE1-206ENST00000492796 MINPP1Q9UNW1 487 aa13.41□□□□□ -0.26
CDC42SE1-206ENST00000492796 POTECB2RU33 542 aa13.4□□□□□ -0.26
CDC42SE1-206ENST00000492796 TRIM27P14373 513 aa13.4□□□□□ -0.26
CDC42SE1-206ENST00000492796 ATF7IPQ6VMQ6 1270 aa13.4□□□□□ -0.26
CDC42SE1-206ENST00000492796 RBM46Q8TBY0 533 aaKnown RBP13.4□□□□□ -0.26
CDC42SE1-206ENST00000492796 ANKRD2Q9GZV1 360 aa13.4□□□□□ -0.26
CDC42SE1-206ENST00000492796 BICC1Q9H694 974 aaKnown RBP13.4□□□□□ -0.26
CDC42SE1-206ENST00000492796 PSME4Q14997 1843 aa13.39□□□□□ -0.27
CDC42SE1-206ENST00000492796 TAF7LQ5H9L4 462 aa13.39□□□□□ -0.27
CDC42SE1-206ENST00000492796 ZKSCAN2Q63HK3 967 aa13.39□□□□□ -0.27
CDC42SE1-206ENST00000492796 INTS3Q68E01 1043 aaKnown RBP13.39□□□□□ -0.27
CDC42SE1-206ENST00000492796 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
CDC42SE1-206ENST00000492796 FRAT1Q92837 279 aaPredicted RBP13.39□□□□□ -0.27
CDC42SE1-206ENST00000492796 ZC3H12CQ9C0D7 883 aaKnown RBP13.39□□□□□ -0.27
CDC42SE1-206ENST00000492796 HDAC5Q9UQL6 1122 aa13.39□□□□□ -0.27
CDC42SE1-206ENST00000492796 LEMD3Q9Y2U8 911 aa13.39□□□□□ -0.27
CDC42SE1-206ENST00000492796 MED23Q9ULK4 1368 aa13.39□□□□□ -0.27
CDC42SE1-206ENST00000492796 RIMBP2O15034 1052 aa13.38□□□□□ -0.27
CDC42SE1-206ENST00000492796 UBTFL1P0CB47 393 aaPredicted RBP13.38□□□□□ -0.27
CDC42SE1-206ENST00000492796 CIAPIN1Q6FI81 312 aa13.38□□□□□ -0.27
CDC42SE1-206ENST00000492796 ANKRD44Q8N8A2 993 aa13.38□□□□□ -0.27
CDC42SE1-206ENST00000492796 HACL1Q9UJ83 578 aa13.38□□□□□ -0.27
CDC42SE1-206ENST00000492796 GJA3Q9Y6H8 435 aa13.38□□□□□ -0.27
CDC42SE1-206ENST00000492796 ECE2O60344 883 aa13.37□□□□□ -0.27
CDC42SE1-206ENST00000492796 LMOD1P29536 600 aaPredicted RBP13.37□□□□□ -0.27
CDC42SE1-206ENST00000492796 CHRNDQ07001 517 aa13.37□□□□□ -0.27
CDC42SE1-206ENST00000492796 CXCL9Q07325 125 aa13.37□□□□□ -0.27
CDC42SE1-206ENST00000492796 FSTL1Q12841 308 aa13.37□□□□□ -0.27
CDC42SE1-206ENST00000492796 TNIP1Q15025 636 aa13.37□□□□□ -0.27
CDC42SE1-206ENST00000492796 SMC1BQ8NDV3 1235 aa13.37□□□□□ -0.27
CDC42SE1-206ENST00000492796 DBNDD1Q9H9R9 158 aa13.37□□□□□ -0.27
CDC42SE1-206ENST00000492796 ADAMTSL1Q8N6G6 1762 aa13.37□□□□□ -0.27
CDC42SE1-206ENST00000492796 YDJCA8MPS7 323 aa13.36□□□□□ -0.27
CDC42SE1-206ENST00000492796 G3V3G9 751 aa13.36□□□□□ -0.27
CDC42SE1-206ENST00000492796 GNAI3P08754 354 aa13.36□□□□□ -0.27
CDC42SE1-206ENST00000492796 DCAF8Q5TAQ9 597 aa13.36□□□□□ -0.27
CDC42SE1-206ENST00000492796 LDHAL6AQ6ZMR3 332 aa13.36□□□□□ -0.27
CDC42SE1-206ENST00000492796 GPR101Q96P66 508 aaPredicted RBP13.36□□□□□ -0.27
CDC42SE1-206ENST00000492796 TAF1DQ9H5J8 278 aaPredicted RBP13.36□□□□□ -0.27
CDC42SE1-206ENST00000492796 CNNM1Q9NRU3 951 aa13.36□□□□□ -0.27
CDC42SE1-206ENST00000492796 ZNF804BA4D1E1 1349 aa13.36□□□□□ -0.27
CDC42SE1-206ENST00000492796 SCN9AQ15858 1988 aa13.35□□□□□ -0.27
CDC42SE1-206ENST00000492796 EPHX2P34913 555 aa13.35□□□□□ -0.27
CDC42SE1-206ENST00000492796 KCNJ4P48050 445 aa13.35□□□□□ -0.27
CDC42SE1-206ENST00000492796 SCNN1DP51172 638 aa13.35□□□□□ -0.27
CDC42SE1-206ENST00000492796 DOK7Q18PE1 504 aa13.35□□□□□ -0.27
CDC42SE1-206ENST00000492796 PNMA8AQ86V59 439 aaPredicted RBP13.35□□□□□ -0.27
CDC42SE1-206ENST00000492796 ZNF594Q96JF6 807 aaPredicted RBP13.35□□□□□ -0.27
CDC42SE1-206ENST00000492796 MEIS3Q99687 375 aa13.35□□□□□ -0.27
CDC42SE1-206ENST00000492796 ZNF609O15014 1411 aa13.35□□□□□ -0.27
CDC42SE1-206ENST00000492796 RAD17O75943 681 aa13.34□□□□□ -0.27
CDC42SE1-206ENST00000492796 PODNQ7Z5L7 613 aa13.34□□□□□ -0.27
CDC42SE1-206ENST00000492796 FTSJ3Q8IY81 847 aaKnown RBP13.34□□□□□ -0.27
CDC42SE1-206ENST00000492796 CLUAP1Q96AJ1 413 aa13.34□□□□□ -0.27
CDC42SE1-206ENST00000492796 LRRFIP2Q9Y608 721 aaKnown RBP13.34□□□□□ -0.27
CDC42SE1-206ENST00000492796 MROH5Q6ZUA9 1318 aa13.34□□□□□ -0.27
CDC42SE1-206ENST00000492796 ZNF646O15015 1829 aaPredicted RBP13.34□□□□□ -0.27
CDC42SE1-206ENST00000492796 HSPA6P17066 643 aa13.33□□□□□ -0.28
CDC42SE1-206ENST00000492796 RPS12P25398 132 aaKnown RBP13.33□□□□□ -0.28
CDC42SE1-206ENST00000492796 C15orf52Q6ZUT6 534 aaKnown RBP13.33□□□□□ -0.28
CDC42SE1-206ENST00000492796 LDHDQ86WU2 507 aa13.33□□□□□ -0.28
CDC42SE1-206ENST00000492796 DZIP1LQ8IYY4 767 aaKnown RBP13.33□□□□□ -0.28
CDC42SE1-206ENST00000492796 COA1Q9GZY4 146 aa13.33□□□□□ -0.28
CDC42SE1-206ENST00000492796 GPRC5DQ9NZD1 345 aa13.33□□□□□ -0.28
CDC42SE1-206ENST00000492796 TNNQ9UQP3 1299 aa13.33□□□□□ -0.28
CDC42SE1-206ENST00000492796 PSMD14O00487 310 aa13.32□□□□□ -0.28
CDC42SE1-206ENST00000492796 TAF5LO75529 589 aa13.32□□□□□ -0.28
CDC42SE1-206ENST00000492796 MS4A1P11836 297 aa13.32□□□□□ -0.28
CDC42SE1-206ENST00000492796 GMPSP49915 693 aaPredicted RBP13.32□□□□□ -0.28
CDC42SE1-206ENST00000492796 CHADLQ6NUI6 762 aa13.32□□□□□ -0.28
CDC42SE1-206ENST00000492796 USP50Q70EL3 339 aaPredicted RBP13.32□□□□□ -0.28
CDC42SE1-206ENST00000492796 TMEM57Q8N5G2 664 aa13.32□□□□□ -0.28
CDC42SE1-206ENST00000492796 DPF2Q92785 391 aa13.32□□□□□ -0.28
CDC42SE1-206ENST00000492796 FBXO3Q9UK99 471 aa13.32□□□□□ -0.28
CDC42SE1-206ENST00000492796 RIPOR2Q9Y4F9 1068 aa13.32□□□□□ -0.28
CDC42SE1-206ENST00000492796 IRS2Q9Y4H2 1338 aa13.32□□□□□ -0.28
CDC42SE1-206ENST00000492796 WTIPA6NIX2 430 aaPredicted RBP13.31□□□□□ -0.28
CDC42SE1-206ENST00000492796 VIL1P09327 827 aaKnown RBP13.31□□□□□ -0.28
CDC42SE1-206ENST00000492796 EPS15P42566 896 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms