RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 CHMP3Q9Y3E7 222 aa22.34■■□□□ 1.17
LMNB1-206ENST00000492190 SCN4AP35499 1836 aa22.34■■□□□ 1.17
LMNB1-206ENST00000492190 ANKRD18BA2A2Z9 1011 aa22.33■■□□□ 1.17
LMNB1-206ENST00000492190 RABL6Q3YEC7 729 aaPredicted RBP22.33■■□□□ 1.17
LMNB1-206ENST00000492190 JDP2Q8WYK2 163 aa22.33■■□□□ 1.17
LMNB1-206ENST00000492190 ZNF594Q96JF6 807 aaPredicted RBP22.33■■□□□ 1.17
LMNB1-206ENST00000492190 C6orf229H3BNL8 230 aa22.32■■□□□ 1.16
LMNB1-206ENST00000492190 IPO8O15397 1037 aaKnown RBP22.32■■□□□ 1.16
LMNB1-206ENST00000492190 IGHMBP2P38935 993 aaKnown RBP22.32■■□□□ 1.16
LMNB1-206ENST00000492190 IFIT5Q13325 482 aaKnown RBP22.32■■□□□ 1.16
LMNB1-206ENST00000492190 DPY19L2Q6NUT2 758 aa22.32■■□□□ 1.16
LMNB1-206ENST00000492190 CLUAP1Q96AJ1 413 aa22.32■■□□□ 1.16
LMNB1-206ENST00000492190 ANKIB1Q9P2G1 1089 aa22.32■■□□□ 1.16
LMNB1-206ENST00000492190 PSME4Q14997 1843 aa22.31■■□□□ 1.16
LMNB1-206ENST00000492190 UFL1O94874 794 aa22.31■■□□□ 1.16
LMNB1-206ENST00000492190 NIM1KQ8IY84 436 aa22.31■■□□□ 1.16
LMNB1-206ENST00000492190 XDHP47989 1333 aa22.31■■□□□ 1.16
LMNB1-206ENST00000492190 RIMBP2O15034 1052 aa22.3■■□□□ 1.16
LMNB1-206ENST00000492190 WASHC4Q2M389 1173 aa22.3■■□□□ 1.16
LMNB1-206ENST00000492190 ZKSCAN2Q63HK3 967 aa22.3■■□□□ 1.16
LMNB1-206ENST00000492190 MEIS3Q99687 375 aa22.3■■□□□ 1.16
LMNB1-206ENST00000492190 GGA1Q9UJY5 639 aa22.3■■□□□ 1.16
LMNB1-206ENST00000492190 YDJCA8MPS7 323 aa22.29■■□□□ 1.16
LMNB1-206ENST00000492190 MPHOSPH8Q99549 860 aa22.29■■□□□ 1.16
LMNB1-206ENST00000492190 CCDC57Q2TAC2 916 aa22.28■■□□□ 1.16
LMNB1-206ENST00000492190 L3MBTL3Q96JM7 780 aaPredicted RBP22.28■■□□□ 1.16
LMNB1-206ENST00000492190 ZNRF3Q9ULT6 936 aa22.28■■□□□ 1.16
LMNB1-206ENST00000492190 ZNF646O15015 1829 aaPredicted RBP22.28■■□□□ 1.16
LMNB1-206ENST00000492190 RLBP1P12271 317 aa22.27■■□□□ 1.16
LMNB1-206ENST00000492190 VEGFAP15692 232 aaPredicted RBP22.27■■□□□ 1.16
LMNB1-206ENST00000492190 EIF6P56537 245 aaKnown RBP22.27■■□□□ 1.16
LMNB1-206ENST00000492190 CHRNDQ07001 517 aa22.27■■□□□ 1.16
LMNB1-206ENST00000492190 CXCL9Q07325 125 aa22.27■■□□□ 1.16
LMNB1-206ENST00000492190 TMEM57Q8N5G2 664 aa22.27■■□□□ 1.16
LMNB1-206ENST00000492190 DBNDD1Q9H9R9 158 aa22.27■■□□□ 1.16
LMNB1-206ENST00000492190 UBTFL1P0CB47 393 aaPredicted RBP22.26■■□□□ 1.15
LMNB1-206ENST00000492190 ATP2B4P23634 1241 aa22.26■■□□□ 1.15
LMNB1-206ENST00000492190 DOK7Q18PE1 504 aa22.26■■□□□ 1.15
LMNB1-206ENST00000492190 GPC2Q8N158 579 aa22.26■■□□□ 1.15
LMNB1-206ENST00000492190 EYA3Q99504 573 aa22.26■■□□□ 1.15
LMNB1-206ENST00000492190 PUS3Q9BZE2 481 aaKnown RBP22.26■■□□□ 1.15
LMNB1-206ENST00000492190 SNAP23O00161 211 aa22.25■■□□□ 1.15
LMNB1-206ENST00000492190 C1QTNF8P60827 252 aa22.25■■□□□ 1.15
LMNB1-206ENST00000492190 HELBQ8NG08 1087 aaPredicted RBP22.25■■□□□ 1.15
LMNB1-206ENST00000492190 KCNQ5Q9NR82 932 aa22.25■■□□□ 1.15
LMNB1-206ENST00000492190 LRRFIP2Q9Y608 721 aaKnown RBP22.25■■□□□ 1.15
LMNB1-206ENST00000492190 GJA3Q9Y6H8 435 aa22.25■■□□□ 1.15
LMNB1-206ENST00000492190 TAF5LO75529 589 aa22.24■■□□□ 1.15
LMNB1-206ENST00000492190 RFX5P48382 616 aaPredicted RBP22.24■■□□□ 1.15
LMNB1-206ENST00000492190 LDHAL6AQ6ZMR3 332 aa22.24■■□□□ 1.15
LMNB1-206ENST00000492190 TXNRD3Q86VQ6 643 aa22.24■■□□□ 1.15
LMNB1-206ENST00000492190 KLHDC4Q8TBB5 520 aa22.24■■□□□ 1.15
LMNB1-206ENST00000492190 YTHDC1Q96MU7 727 aaKnown RBP22.24■■□□□ 1.15
LMNB1-206ENST00000492190 ZC3H12CQ9C0D7 883 aaKnown RBP22.24■■□□□ 1.15
LMNB1-206ENST00000492190 ECE2O60344 883 aa22.23■■□□□ 1.15
LMNB1-206ENST00000492190 RAD17O75943 681 aa22.23■■□□□ 1.15
LMNB1-206ENST00000492190 KLRK1P26718 216 aa22.23■■□□□ 1.15
LMNB1-206ENST00000492190 TAF7LQ5H9L4 462 aa22.23■■□□□ 1.15
LMNB1-206ENST00000492190 ANKRD2Q9GZV1 360 aa22.23■■□□□ 1.15
LMNB1-206ENST00000492190 MED23Q9ULK4 1368 aa22.23■■□□□ 1.15
LMNB1-206ENST00000492190 TOMM70O94826 608 aa22.22■■□□□ 1.15
LMNB1-206ENST00000492190 RCAN3Q9UKA8 241 aa22.22■■□□□ 1.15
LMNB1-206ENST00000492190 LEMD3Q9Y2U8 911 aa22.22■■□□□ 1.15
LMNB1-206ENST00000492190 RIPOR2Q9Y4F9 1068 aa22.22■■□□□ 1.15
LMNB1-206ENST00000492190 ZNF804BA4D1E1 1349 aa22.22■■□□□ 1.15
LMNB1-206ENST00000492190 IRS2Q9Y4H2 1338 aa22.22■■□□□ 1.15
LMNB1-206ENST00000492190 ADAMTSL1Q8N6G6 1762 aa22.21■■□□□ 1.15
LMNB1-206ENST00000492190 SCNN1DP51172 638 aa22.21■■□□□ 1.15
LMNB1-206ENST00000492190 LRRC24Q50LG9 513 aa22.21■■□□□ 1.15
LMNB1-206ENST00000492190 CIAPIN1Q6FI81 312 aa22.21■■□□□ 1.15
LMNB1-206ENST00000492190 DZIP1LQ8IYY4 767 aaKnown RBP22.21■■□□□ 1.15
LMNB1-206ENST00000492190 CNNM1Q9NRU3 951 aa22.21■■□□□ 1.15
LMNB1-206ENST00000492190 GNAI3P08754 354 aa22.2■■□□□ 1.14
LMNB1-206ENST00000492190 POTEIP0CG38 1075 aa22.2■■□□□ 1.14
LMNB1-206ENST00000492190 POTEJP0CG39 1038 aa22.2■■□□□ 1.14
LMNB1-206ENST00000492190 TAF1DQ9H5J8 278 aaPredicted RBP22.2■■□□□ 1.14
LMNB1-206ENST00000492190 CEP350Q5VT06 3117 aa22.19■■□□□ 1.14
LMNB1-206ENST00000492190 PSMD14O00487 310 aa22.19■■□□□ 1.14
LMNB1-206ENST00000492190 PTPN12Q05209 780 aaKnown RBP22.19■■□□□ 1.14
LMNB1-206ENST00000492190 RBM46Q8TBY0 533 aaKnown RBP22.19■■□□□ 1.14
LMNB1-206ENST00000492190 PANK1Q8TE04 598 aa22.19■■□□□ 1.14
LMNB1-206ENST00000492190 IQCA1LA6NCM1 817 aa22.18■■□□□ 1.14
LMNB1-206ENST00000492190 PLIN1O60240 522 aa22.18■■□□□ 1.14
LMNB1-206ENST00000492190 EPS15P42566 896 aa22.18■■□□□ 1.14
LMNB1-206ENST00000492190 GMPSP49915 693 aaPredicted RBP22.18■■□□□ 1.14
LMNB1-206ENST00000492190 FTSJ3Q8IY81 847 aaKnown RBP22.18■■□□□ 1.14
LMNB1-206ENST00000492190 C16orf71Q8IYS4 520 aaPredicted RBP22.18■■□□□ 1.14
LMNB1-206ENST00000492190 HACL1Q9UJ83 578 aa22.18■■□□□ 1.14
LMNB1-206ENST00000492190 TNIP1Q15025 636 aa22.17■■□□□ 1.14
LMNB1-206ENST00000492190 POLR2AP24928 1970 aaKnown RBP22.17■■□□□ 1.14
LMNB1-206ENST00000492190 EPHX2P34913 555 aa22.16■■□□□ 1.14
LMNB1-206ENST00000492190 KCNJ4P48050 445 aa22.16■■□□□ 1.14
LMNB1-206ENST00000492190 VGLL2Q8N8G2 317 aa22.16■■□□□ 1.14
LMNB1-206ENST00000492190 ZBTB12Q9Y330 459 aaPredicted RBP22.16■■□□□ 1.14
LMNB1-206ENST00000492190 SHTN1A0MZ66 631 aa22.15■■□□□ 1.14
LMNB1-206ENST00000492190 MTX1Q13505 466 aa22.15■■□□□ 1.14
LMNB1-206ENST00000492190 C15orf52Q6ZUT6 534 aaKnown RBP22.15■■□□□ 1.14
LMNB1-206ENST00000492190 ATG9AQ7Z3C6 839 aa22.15■■□□□ 1.14
LMNB1-206ENST00000492190 ITPRIPQ8IWB1 547 aa22.15■■□□□ 1.14
LMNB1-206ENST00000492190 GPRC5DQ9NZD1 345 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms