RNA–Protein interactions for RNA: ENST00000491998.5

DFFB-211, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,152 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-211ENST00000491998 IL17RAQ96F46 866 aa13.54□□□□□ -0.24
DFFB-211ENST00000491998 ST7Q9NRC1 585 aa13.54□□□□□ -0.24
DFFB-211ENST00000491998 TTC21AQ8NDW8 1320 aa13.54□□□□□ -0.24
DFFB-211ENST00000491998 STRCQ7RTU9 1775 aa13.54□□□□□ -0.24
DFFB-211ENST00000491998 USP31Q70CQ4 1352 aa13.54□□□□□ -0.24
DFFB-211ENST00000491998 CRB1P82279 1406 aa13.54□□□□□ -0.24
DFFB-211ENST00000491998 SRGAP3O43295 1099 aa13.54□□□□□ -0.24
DFFB-211ENST00000491998 ZNF75DP51815 510 aa13.54□□□□□ -0.24
DFFB-211ENST00000491998 GOLGA6L1Q8N7Z2 621 aa13.54□□□□□ -0.24
DFFB-211ENST00000491998 JMYQ8N9B5 988 aa13.54□□□□□ -0.24
DFFB-211ENST00000491998 PHAXQ9H814 394 aaKnown RBP13.54□□□□□ -0.24
DFFB-211ENST00000491998 TRMT1Q9NXH9 659 aaKnown RBP13.54□□□□□ -0.24
DFFB-211ENST00000491998 CLIP2Q9UDT6 1046 aa13.54□□□□□ -0.24
DFFB-211ENST00000491998 STK3Q13188 491 aa13.53□□□□□ -0.24
DFFB-211ENST00000491998 LRRC59Q96AG4 307 aaKnown RBP13.53□□□□□ -0.24
DFFB-211ENST00000491998 TPCN1Q9ULQ1 816 aa13.53□□□□□ -0.24
DFFB-211ENST00000491998 SOS1Q07889 1333 aaPredicted RBP13.53□□□□□ -0.24
DFFB-211ENST00000491998 HOXC9P31274 260 aa13.53□□□□□ -0.24
DFFB-211ENST00000491998 RBM5P52756 815 aaKnown RBP eCLIP13.53□□□□□ -0.24
DFFB-211ENST00000491998 CCDC96Q2M329 555 aa13.53□□□□□ -0.24
DFFB-211ENST00000491998 ARMCX6Q7L4S7 300 aa13.53□□□□□ -0.24
DFFB-211ENST00000491998 CNTROBQ8N137 903 aa13.53□□□□□ -0.24
DFFB-211ENST00000491998 MARF1Q9Y4F3 1742 aaKnown RBP13.53□□□□□ -0.24
DFFB-211ENST00000491998 KRT85P78386 507 aa13.53□□□□□ -0.24
DFFB-211ENST00000491998 SYTL4Q96C24 671 aaPredicted RBP13.53□□□□□ -0.24
DFFB-211ENST00000491998 LCMT1Q9UIC8 334 aa13.53□□□□□ -0.24
DFFB-211ENST00000491998 NR1I2O75469 434 aa13.52□□□□□ -0.24
DFFB-211ENST00000491998 ATP6V1AP38606 617 aa13.52□□□□□ -0.24
DFFB-211ENST00000491998 ZNF165P49910 485 aa13.52□□□□□ -0.24
DFFB-211ENST00000491998 C19orf44Q9H6X5 657 aa13.52□□□□□ -0.24
DFFB-211ENST00000491998 ZNF215Q9UL58 517 aaPredicted RBP13.52□□□□□ -0.24
DFFB-211ENST00000491998 CYP46A1Q9Y6A2 500 aa13.52□□□□□ -0.24
DFFB-211ENST00000491998 ZNF335Q9H4Z2 1342 aaPredicted RBP13.52□□□□□ -0.24
DFFB-211ENST00000491998 CEP135Q66GS9 1140 aa13.52□□□□□ -0.25
DFFB-211ENST00000491998 FBXW7Q969H0 707 aa13.52□□□□□ -0.25
DFFB-211ENST00000491998 NBPF7P0C2Y1 421 aaPredicted RBP13.51□□□□□ -0.25
DFFB-211ENST00000491998 CEBPZQ03701 1054 aaKnown RBP13.51□□□□□ -0.25
DFFB-211ENST00000491998 MAP9Q49MG5 647 aa13.51□□□□□ -0.25
DFFB-211ENST00000491998 KMT5BQ4FZB7 885 aa13.51□□□□□ -0.25
DFFB-211ENST00000491998 A0A1B0GUL7 405 aa13.51□□□□□ -0.25
DFFB-211ENST00000491998 DDX11Q96FC9 970 aa13.51□□□□□ -0.25
DFFB-211ENST00000491998 SPATA32Q96LK8 384 aa13.51□□□□□ -0.25
DFFB-211ENST00000491998 H0YHG0 523 aa13.51□□□□□ -0.25
DFFB-211ENST00000491998 SARNPP82979 210 aaKnown RBP13.51□□□□□ -0.25
DFFB-211ENST00000491998 C11orf91Q3C1V1 193 aa13.51□□□□□ -0.25
DFFB-211ENST00000491998 CCDC30Q5VVM6 783 aa13.51□□□□□ -0.25
DFFB-211ENST00000491998 FILIP1Q7Z7B0 1213 aa13.51□□□□□ -0.25
DFFB-211ENST00000491998 BICD2Q8TD16 824 aa13.51□□□□□ -0.25
DFFB-211ENST00000491998 CABLES1Q8TDN4 633 aa13.51□□□□□ -0.25
DFFB-211ENST00000491998 SSH3Q8TE77 659 aa13.51□□□□□ -0.25
DFFB-211ENST00000491998 TAF6LQ9Y6J9 622 aa13.51□□□□□ -0.25
DFFB-211ENST00000491998 RPS6KL1Q9Y6S9 549 aa13.51□□□□□ -0.25
DFFB-211ENST00000491998 EIF2S2P20042 333 aaKnown RBP13.5□□□□□ -0.25
DFFB-211ENST00000491998 MUM1L1Q5H9M0 696 aa13.5□□□□□ -0.25
DFFB-211ENST00000491998 PLA2G4DQ86XP0 818 aa13.5□□□□□ -0.25
DFFB-211ENST00000491998 C1orf167Q5SNV9 1468 aa13.5□□□□□ -0.25
DFFB-211ENST00000491998 RAB11FIP3O75154 756 aa13.5□□□□□ -0.25
DFFB-211ENST00000491998 LARP1Q6PKG0 1096 aaKnown RBP13.5□□□□□ -0.25
DFFB-211ENST00000491998 TMTC2Q8N394 836 aa13.5□□□□□ -0.25
DFFB-211ENST00000491998 USP16Q9Y5T5 823 aa13.5□□□□□ -0.25
DFFB-211ENST00000491998 KIF3CO14782 793 aa13.49□□□□□ -0.25
DFFB-211ENST00000491998 FOSBP53539 338 aa13.49□□□□□ -0.25
DFFB-211ENST00000491998 ZC3H6P61129 1189 aaKnown RBP13.49□□□□□ -0.25
DFFB-211ENST00000491998 CCT2P78371 535 aaKnown RBP13.49□□□□□ -0.25
DFFB-211ENST00000491998 ELF2Q15723 593 aa13.49□□□□□ -0.25
DFFB-211ENST00000491998 TTC31Q49AM3 519 aaPredicted RBP13.49□□□□□ -0.25
DFFB-211ENST00000491998 SWT1Q5T5J6 900 aaKnown RBP13.49□□□□□ -0.25
DFFB-211ENST00000491998 VPS53Q5VIR6 699 aa13.49□□□□□ -0.25
DFFB-211ENST00000491998 ANXA1P04083 346 aa13.49□□□□□ -0.25
DFFB-211ENST00000491998 MAP2K2P36507 400 aa13.49□□□□□ -0.25
DFFB-211ENST00000491998 MTA1Q13330 715 aa13.49□□□□□ -0.25
DFFB-211ENST00000491998 ATG3Q9NT62 314 aa13.49□□□□□ -0.25
DFFB-211ENST00000491998 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.49□□□□□ -0.25
DFFB-211ENST00000491998 FLT4P35916 1363 aa13.49□□□□□ -0.25
DFFB-211ENST00000491998 ERCC4Q92889 916 aaPredicted RBP13.48□□□□□ -0.25
DFFB-211ENST00000491998 FAM227BQ96M60 508 aa13.48□□□□□ -0.25
DFFB-211ENST00000491998 ZSWIM6Q9HCJ5 1215 aa13.48□□□□□ -0.25
DFFB-211ENST00000491998 PAXBP1Q9Y5B6 917 aa13.48□□□□□ -0.25
DFFB-211ENST00000491998 LEO1Q8WVC0 666 aaPredicted RBP13.48□□□□□ -0.25
DFFB-211ENST00000491998 KIF1BPQ96EK5 621 aa13.48□□□□□ -0.25
DFFB-211ENST00000491998 PGBD1Q96JS3 809 aa13.48□□□□□ -0.25
DFFB-211ENST00000491998 NBPF3Q9H094 633 aa13.48□□□□□ -0.25
DFFB-211ENST00000491998 SBNO1A3KN83 1393 aa13.48□□□□□ -0.25
DFFB-211ENST00000491998 FBXO38Q6PIJ6 1188 aa13.48□□□□□ -0.25
DFFB-211ENST00000491998 ANKRD20A12PQ8NF67 263 aa13.48□□□□□ -0.25
DFFB-211ENST00000491998 AXIN2Q9Y2T1 843 aa13.48□□□□□ -0.25
DFFB-211ENST00000491998 PPFIA3O75145 1194 aa13.47□□□□□ -0.25
DFFB-211ENST00000491998 ATF3P18847 181 aa13.47□□□□□ -0.25
DFFB-211ENST00000491998 KRBA2Q6ZNG9 492 aa13.47□□□□□ -0.25
DFFB-211ENST00000491998 PACS2Q86VP3 889 aa13.47□□□□□ -0.25
DFFB-211ENST00000491998 NEK11Q8NG66 645 aa13.47□□□□□ -0.25
DFFB-211ENST00000491998 ZSCAN31Q96LW9 406 aaPredicted RBP13.47□□□□□ -0.25
DFFB-211ENST00000491998 SH2B1Q9NRF2 756 aaPredicted RBP13.47□□□□□ -0.25
DFFB-211ENST00000491998 RBM8AQ9Y5S9 174 aaKnown RBP13.47□□□□□ -0.25
DFFB-211ENST00000491998 AOX1Q06278 1338 aa13.47□□□□□ -0.25
DFFB-211ENST00000491998 MST1RQ04912 1400 aa13.47□□□□□ -0.25
DFFB-211ENST00000491998 SKILP12757 684 aa13.47□□□□□ -0.25
DFFB-211ENST00000491998 LRRC8AQ8IWT6 810 aa13.47□□□□□ -0.25
DFFB-211ENST00000491998 PA2G4Q9UQ80 394 aaKnown RBP13.47□□□□□ -0.25
DFFB-211ENST00000491998 INHBEP58166 350 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms